Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016555.1_202016-02-08] 142 sequences; 9,351,707 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq27 235 6e-57 >seq27 Length=164711 Score = 235 bits (260), Expect = 6e-57 Identities = 580/865 (67%), Gaps = 21/865 (2%) Strand=Plus/Plus Query 15912 TTTGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAAAGATATATTTT 15971 ||||||||||| ||| | |||||||||||||| ||||| || | ||||| || || | Sbjct 105992 TTTGGTAATCAGAAACTCTCTTTTCGAAGAAGTTGGTTTTACCGGCCAAAGAAATGTTCT 106051 Query 15972 CCATAAAATCAAAGGGATTAGTAGCTGAAAATATCTTAGAGTACCCCAGTTCCGTAACTA 16031 |||| || ||||| ||||| | | | | ||| || ||||| | | || Sbjct 106052 CCATGAAGTCAAATGGATTGTTGACGTTGTACACCTTTTTGTTGCCCAGAGCTACCAGTA 106111 Query 16032 ATCTATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAATTCCTA-TAAGT 16090 ||| || || || || || | ||| || ||||| ||| ||| || || || | |||| Sbjct 106112 GTCTGTCAGCAACGAACTCAACATACTGGCACATCAAGCTGCAGTTCATCCCCAGTAAGG 106171 Query 16091 CGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATGATA 16150 | || |||||||| | ||| || | || ||| ||| | || || ||| | || || Sbjct 106172 AG-ACAGGAAGAGCGTCTGTGAAGTACCTTTTTTCGATCTCGACAGCCTCTGTGATAATC 106230 Query 16151 TCGGTGGCTCGTGTTTCAGACGG--TGTATGGTTTAGGTGTTTAAACATTAGACACGCGA 16208 | | || || | || | | ||| ||||| || ||| | | || || | Sbjct 106231 TT--TTCAACGATTTCCTCACTGGCTCTATTGTTTAAATGAGAAAATAGCAAGCAAGCAA 106288 Query 16209 AGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCA 16268 |||| |||| ||| |||||||||| ||||| || ||||| || || || ||||||| Sbjct 106289 AGTCAGTGTGTAATCCCTCGTCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCTGGCA 106348 Query 16269 TTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCT 16328 | |||| ||||| |||||||| || | |||||| || || |||||||| ||||||| Sbjct 106349 TGAGACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAAGATCCTGAAAAGAAGATACCCT 106408 Query 16329 CAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACGAATCCATT 16388 |||||| || || || | || ||||| ||| || ||||| | || | ||||||| Sbjct 106409 CAACAGCAGCGAAGGCAACCAAACGTTCAGCGAACAATGCATCGTCATCAGAAATCCATC 106468 Query 16389 TCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCTTAAACA--A 16446 || |||| || || |||| ||| ||||| || || || ||||| || |||| | Sbjct 106469 TCATGGCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTCGATGGCATTGAACAGGA 106528 Query 16447 TTTC--TCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTACATTTCT 16504 ||| || ||| || ||| | || || ||||||||||| || ||| | || Sbjct 106529 ATTCAGACTCTTT--TG--GATCTTTGATGTAAGTATCAATCAGCAAGGAGTAAGTCTCG 106584 Query 16505 GAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATTTGT 16564 ||||| |||||||| || ||||| || || || |||||| || || | | ||| Sbjct 106585 GAGTGAATGTTCTCCATCATGATCTGGAAACCGTAAAAGCATTTTGCTTCGGGAAGTTGA 106644 Query 16565 ACTTC--CACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGCAA 16622 || || ||| | |||| |||| ||| ||| ||||| || ||||||||| ||||||| Sbjct 106645 ACCTCAGCAC-TGAAAT-TTTCCACCAAGTTTTCATTGACAATACCGTCAGAGGCAGCAA 106702 Query 16623 AAAACGCCAATATGTGCTTAATGAAATATTTTTCGTCA--GAT-GTAAGAATATGCCAAT 16679 | || || | | | ||||| ||||||| | | | | || || ||| ||| | Sbjct 106703 AGAAGGCAAGGACTCTCGAGATGAAGAATTTTTCATTATCGTTCATACGATTATTCCAGT 106762 Query 16680 CTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCCACTGCCTTTT 16739 | | ||||| || | || | ||| || | ||||||||| ||| | |||| | Sbjct 106763 CATGCAAATCCTTACCCAGGTCTATTTCCTCAGCAGTCCAAAAGGAAGCTTCGGCCTGCT 106822 Query 16740 TATACATTTTCCAAATATCATTGTA 16764 | ||||||| ||| ||||| | ||| Sbjct 106823 TGTACATTTGCCAGATATCGTGGTA 106847 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511413492239440