Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016555.1_202016-02-08]
142 sequences; 9,351,707 total letters
Query= NC_003389.1
Length=146454
Score E
Sequences producing significant alignments: (Bits) Value
seq30 224 9e-54
>seq30
Length=271157
Score = 224 bits (248), Expect = 9e-54
Identities = 1166/1833 (64%), Gaps = 53/1833 (3%)
Strand=Plus/Plus
Query 36835 TAATACATTCCAGTTTTTAGCCCCAATCTCCATCCGTAAAAATGCATACTGGTCAGTTTT 36894
|| ||||| ||||| |||| || |||| || ||||| ||||||||||||| |||
Sbjct 87886 TAGTACATACCAGTCTTTAATCCTTTCTTCCAACCATAAAAGTGCATACTGGTCAATTTA 87945
Query 36895 GCGTATGTAGGATT-ATCTATATATATTGTCATTGATTGACTTTGATCTATAAACGCACC 36953
| || ||| ||| | | || ||| || ||| |||||| ||| | ||
Sbjct 87946 CCCATAGTTGGAGCCATC-AGGTGAATGTTCAACGACTGAGATTGATCGATATAGGCTGA 88004
Query 36954 TCTGTCGGCTGCCATTTCTAAAATACATTTTTGAGATATCTCCCAAACCGTTTTATATAT 37013
||| ||||| ||||| || | |||| |||||||| ||||||||||| || || || |
Sbjct 88005 TCTATCGGCAGCCATATCAATAATAGTCTTTTGAGAAATCTCCCAAACAGTCTTGTAAAG 88064
Query 37014 TTGTTTTATATTATCTGGTAAAT---CTAAATGTTGAATAGAACCATTATGTAACACAAT 37070
||| | | || |||| | |||| ||||||||| || || | | | | ||
Sbjct 88065 GCCTTTAAGTTGCTCAGGTATGTTGGGCAAATTTTGAATAGAGCCGTTGTCTGAAATGAT 88124
Query 37071 TGTATTCTTTATGTCATTATTCCACATATTTCTACTTATTAGTTCTCTCAATAGGTGTGG 37130
||| || |||| || | ||| | | | | ||| || | ||||| || ||
Sbjct 88125 ATGATTTTTCATGTTATCGTCCCAAAGACCCAAATCCACTAGATCACGCAATAAGTAAGG 88184
Query 37131 ATTTACAACCTGAAAATCTCCAGATAATACTCTTCTTGTATATATATTGCTAGTATATGG 37190
||| |||| ||||| ||||||| |||||| | | || || || ||| ||| || ||
Sbjct 88185 ATTAACAATTTGAAATTCTCCAGCTAATACACGGCGTGAGTAGATGTTGGAAGTGTAAGG 88244
Query 37191 TTCAATGGACTCATTATTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTAT 37250
||| | |||| || | || | ||||| || || || ||||| ||||| ||||| |
Sbjct 88245 TTCGAAACACTCGTTGTAACCCAGAATTTGGGAAGTTGAAGCAGTGGGCATAGGTGCAAC 88304
Query 37251 TAGAAGGCTATTTCTCAATCCATGTGTATTAATTCTCTT---TTTTAGTTCATTCCAATC 37307
||| | ||||| || || |||| | || |||| ||| ||| | ||| ||
Sbjct 88305 TAGCAACGAGTTTCTTAAACC-TGTGGA--AACAATCTTGGCTTTGAGTGATTCCCATTC 88361
Query 37308 CCATAAATCTGTTGGGTTCTTTAACCACATATCATATTGTAGAATACCTTTACTCGCTGG 37367
||| | || | || ||||| ||||| |||||||| | ||| || | | |||||
Sbjct 88362 CCACAGCTCAGAGGGCTTCTTGTCCCACAAGTCATATTGCAAAATGCCCTGAGATGCTGG 88421
Query 37368 AGAATCGTTATATGTCTCATAAGGTCCGTAAATTTTA--GCTAGTTCGCAACTAGATTCT 37425
|||| | | | || || || | ||| | || | |||| |||| | |||
Sbjct 88422 AGAACCTTGGAAGGTTTCGTAGGCTCCTT--CTTCGACGGCTAATTCGTTGGAGGCTTCC 88479
Query 37426 AGTGCGGCATAATATATTGTTTCGAAAATTTGTATATTTAATATTTTTGCTTCTTCGCTA 37485
| || |||| || || ||||| ||||| || ||||| | ||| |||||| |
Sbjct 88480 AAAGCTGCATGGTAGATAGTTTCAAAAATCTGAATATTAAGCTGTTTGGCTTCTGGAGAA 88539
Query 37486 TCGAATGCATAGCCCAATAATATAAACACATCAGCCAAACCCTGAACACCGATACCTATG 37545
|| || | | | ||| ||||| ||||||| ||||| |||||||| | | ||||
Sbjct 88540 TCAAAAGGAATTCTCAACTTCATAAAAGCATCAGCTAAACCTTGAACACCCACAGCTATA 88599
Query 37546 GGTCTATGTTTCTTATTAGATCTAGACGATTCTATCACTGGATAATAATTGATATCTATT 37605
||||||| | |||| ||||| | |||| || || ||| |||| | || ||
Sbjct 88600 GGTCTATTACGCATATTCGATCTCCTAGCTTCTGGAACGGGGTAAAAATTTCTGTCGATA 88659
Query 37606 ATTTTATTTAGATTTTTAACTAGT----ATTTTCGTAATT--------ATTCTC-AACTT 37652
||| | || | || || ||| | ||| || ||| || || || ||
Sbjct 88660 ATTCTGTTCAAGTT----ACGAGTAACCACTTTGGTGATTTCATGCAGCTTTTCAAAGTT 88715
Query 37653 GT-CGAACA-TAAATA-CGTTATTATTAACAAATTTACTCAACGA--AATAGATCCTAGA 37707
|| | | || | | || | | | | |||||| || | || |||||| | |
Sbjct 88716 GTACCAGCAGTGAGTATCATCGGTTTCAACAAA--GGCTGGAAGAGCAATAGAAGCCAAG 88773
Query 37708 TTACATACAGCAACTTCATCTTCGTTACTAAATTGTATAATCTCTGTACAGAGATTACTC 37767
||||| |||||| || || | | ||| | ||| || || || |||
Sbjct 88774 TTACAGACAGCAGTCTCTTCCGGGGAAGAGTATTCAACAATTTCACAGCAAAGGTTAGAG 88833
Query 37768 GATCTAATTGTTCCCAAATTGCTTTGATTGGATTTTTTATTACAAGAATCTTTATATAGT 37827
||| |||| ||||| || | || || | |||||| ||||||| ||| ||||| ||
Sbjct 88834 GATTTAATGACACCCAAGTTCTTCTGGTTAGTTTTTTTGTTACAAGCATCCTTATACAGC 88893
Query 37828 ATATACGGCGTTCCTTGTTCTATTTGAGCCTCGATAATAGATTTCCATAAACTTCT-TGC 37886
|| | || || || |||| |||| ||||| | || | | ||| || ||| | ||
Sbjct 88894 ATGAATGGAGTACCAGTTTCTGTTTGTGCCTCAAGGATGGCGTACCA-AAGCTTTTGGGC 88952
Query 37887 TTTAACG--ATCGCTTTAAtttttttCTTTGTTTCGTATTCTATATATAATTTGTTAAAA 37944
||| | | | ||| | ||| | |||||||| | || |||| | |||
Sbjct 88953 TTTGATGGTTTGTCTTCCACGACCTTCCT--TTTCGTATCTTTCGTACAATTCCTCAAAT 89010
Query 37945 TCATTCCCCCATACATCGCATAATCCTGGACATTCGCATGGACACATTAGAGACCATTCT 38004
|||| || | || ||| | || ||| ||| | |||| | | || | ||| ||
Sbjct 89011 TCATCTCCATAGACGTCGGCAAGGCCAGGAGCTTCACTTGGAGAGAACAGGGTCCAATCG 89070
Query 38005 TCATCTTTTTCTACGCGTTCCATAAATAAATCAGGTACCCATAATGCAGTAAATAAATCT 38064
||| | |||||| | || ||| || | |||||| | ||| || || | ||||| |||
Sbjct 89071 CCATTCTGTTCTACTCTTTTCATGAACAGATCAGGGATCCACAAAGCGGGGAATAAGTCT 89130
Query 38065 TTGGTTCTATATTCTTCGTTCCCTACATTCTTTCTTAAGCTTAGAAAATCGAATATATCA 38124
| | ||| || || || || ||||| | | | || | || || ||
Sbjct 89131 CTAGCTCTGATCTCCTCTTTACCATGGTTCTTACGAATATCAATGAAGGCAAAGATGTCG 89190
Query 38125 GCGTGCCATGGTTCTATATAAATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTA 38184
|| |||||||| || | || | | | ||| || || | ||| | ||| || || | |
Sbjct 89191 GCATGCCATGGCTCCAAGTACAAAGCAAATGCACCAGGACGTTTGTTACCACCTTGGTCA 89250
Query 38185 ATATATCTAACTGTGTTATTATATATTCTTAACATAGGTACTATACCATTAGATTTGCCG 38244
| ||| | | | ||||| || | | || | ||| || | |||||||| || | |||
Sbjct 89251 ACATAACGAGCAGTGTTGTTGAAGACCCTCACCATTGGAATAATACCATTCGAAGTACCG 89310
Query 38245 TTTATACCGGATATATAAGTACCCTTAGCTCGTATATTACTTATCGACAATCCTATTCCA 38304
|| |||| | || || | || | || || |||||| || ||| || ||||||
Sbjct 89311 TTAGTACCAGCAATGTAGGATCCTGTGGCACGAATATTATGAATGTGCAAACCAATTCCA 89370
Query 38305 CCTGCATGTTTTGATATTAAAGCGCATTGTTTTAACGTATCAAATATACCTTCTATACTG 38364
|| ||| ||| || |||||||| |||| || || ||||| | || ||||| || |
Sbjct 89371 CCAGCAGTTTTGGAGATTAAAGCACATTCCTTCAAAGTATCGTAAATGCCTTCAATTGAG 89430
Query 38365 TCATCCTTTATTGGTAGTATAAAACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTA 38424
|||||| || | | || ||||| |||||||| || || || || ||||||
Sbjct 89431 TCATCCCGCATGGCAACTAAGAAACATGATGACATTTGTGGGTGAGGGGTACCAGCGTTA 89490
Query 38425 AATAATGTAGGAGATGCATGTATGAACCATTTTTCCGACAAATAA--TTATATGTTTCTA 38482
|| | |||||||| ||||| |||| || ||| ||| |||| ||||| ||||| |
Sbjct 89491 AACAGAGTAGGAGAGGCATGAGTGAA--ATACTTCTGACTCATAAAGTTATAAGTTTCAA 89548
Query 38483 TTACATCAT-CTATATCACCGCCGTGAATACCTAGAGATACCCTCATTAGCATATGTTGT 38541
| || || | | || ||| | || ||||| || | || || | ||| | || |||||
Sbjct 89549 TAAC-TCTTGCAATGTCATCACCATGAATGCCGATAGCAACACGCATAATCAAGTGTTGA 89607
Query 38542 GGTCTTTCTATTATTTTATTATTCTGTTTAAGTAGATACGATTTTTCTAATGTTTTTATT 38601
|| | |||| | ||| ||| | | || || || ||| |||| || || || | |
Sbjct 89608 GGACGTTCTGCAACATTACCATTAATTCTCAGAAGGTAAGATCTTTCCAAGGTCTTGAAT 89667
Query 38602 CCAAAATAACTATA-TGAATAATCTCTATCGTA 38633
||||| || |||| |||| | |||||||||||
Sbjct 89668 CCAAAGTAGTTATACTGAA-AGTCTCTATCGTA 89699
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 468523968368480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |