Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016555.1_202016-02-08] 142 sequences; 9,351,707 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq30 405 7e-108 seq27 183 4e-41 >seq30 Length=271157 Score = 405 bits (448), Expect = 7e-108 Identities = 1376/2135 (64%), Gaps = 23/2135 (1%) Strand=Plus/Plus Query 78707 CCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTC 78766 ||||||| | ||| || ||||||| ||| | || | || ||||| || |||||||| | Sbjct 87836 CCTTGTCAACTGTAAACTGAATGGCAGCAGCGGCAGCTTGAGTACGCAGGTAGTACATAC 87895 Query 78767 CCGTTTTTAGACCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCG 78826 | || |||| || |||| || || || |||||||| || | ||| | | | Sbjct 87896 CAGTCTTTAATCCTTTCTTCCAACCATAAAAGTGCATACTGGTCAATTTACCCATAGTTG 87955 Query 78827 GATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAG 78886 || | | || || |||| || ||| ||||||||| ||||| || || |||| Sbjct 87956 GAGCCATCAGGTGAATGTTCAACGACTGAGATTGATCGATATAGGCTGATCTATCGGCAG 88015 Query 78887 CCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATAT 78946 |||| | || || |||||||| | ||| ||||||| ||| || |||| | |||| | Sbjct 88016 CCATATCAATAATAGTCTTTTGAGAAATCTCCCAAACAGTCTTGTAAAGGCCTTTAAGTT 88075 Query 78947 CTTCTGGAAGGTTTGT---ATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGA 79003 || || | ||| | ||| ||||| || || |||| || || ||| || | Sbjct 88076 GCTCAGGTATGTTGGGCAAATTTTGAATAGAGCCGTTGTCTGAAATGATATGATTTTTCA 88135 Query 79004 TCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTT 79063 | | || | ||| | || || | | | | | | |||||||| | || Sbjct 88136 TGTTATCGTCCCAAAGACCCAAATCCACTAGATCACGCAATAAGTAAGGATTAACAATTT 88195 Query 79064 GAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATT 79123 |||||||||||| ||||| | || | ||| || || || || ||||| | | | Sbjct 88196 GAAATTCTCCAGCTAATACACGGCGTGAGTAGATGTTGGAAGTGTAAGGTTCGAAACACT 88255 Query 79124 CATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTAT 79183 | || | |||| |||||| | |||||| || || ||||||||||| || | || | Sbjct 88256 CGTTGTAACCCAGAATTTGGGAAGTTGAAGCAGTGGGCATAGGTGCAACTAGCAACGAGT 88315 Query 79184 TTCTAAGACCGTATGATCTGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGACG 79243 |||| | ||| || || || |||| || |||||||| ||||| || ||||| | Sbjct 88316 TTCTTAAACCTGTGGAAACAATCTTGGCTTTGAGTGATTCCCATTCCCACAGCTCAGAGG 88375 Query 79244 GGACAACATTCCAAAGATCATATTGTAGAATACCGTTACTAGCGTATGATCCTGTGTATG 79303 | | ||| | |||||||| | ||| || | | || || ||| | | | Sbjct 88376 GCTTCTTGTCCCACAAGTCATATTGCAAAATGCCCTGAGATGCTGGAGAACCTTGGAAGG 88435 Query 79304 TTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAATAAA 79363 |||| || | |||||| | |||||||||| || || || ||| | | || | Sbjct 88436 TTTCGTAGGCTCCTTCTTCGACGGCTAATTCGTTGGAGGCTTCCAAAGCTGCATGGTAGA 88495 Query 79364 TGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAATTTA 79423 | ||||| ||||||| |||| || | || |||||| | |||||| ||| | | Sbjct 88496 TAGTTTCAAAAATCTGAATATTAAGCTGTTTGGCTTCTGGAGAATCAAAAGGAATTCTCA 88555 Query 79424 AGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTAT 79483 | ||||| || || ||||| ||||||||||| | | | |||||||||| | | ||| Sbjct 88556 ACTTCATAAAAGCATCAGCTAAACCTTGAACACCCACAGCTATAGGTCTATTACGCATAT 88615 Query 79484 TAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTCC 79543 | || | ||||||||||| || ||| |||| | || |||||| | || | || | Sbjct 88616 TCGATCTCCTAGCTTCTGGAACGGGGTAAAAATTTCTGTCGATAATTCTGTTCAAGTTAC 88675 Query 79544 TGACTATT-ACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCGTC---------CA 79593 || || |||||| | || | || || ||| | | | | || Sbjct 88676 -GAGTAACCACTTTGGTGATTTCATGCAGCTTTTCAAAGTTGTACCAGCAGTGAGTATCA 88734 Query 79594 TCTATTACAAACATG--TTCAAC-GCGACAGATGCCAGATTACAAACGGCTACCTCATTA 79650 || || ||| | | | || || | ||| |||| ||||| || || ||| | Sbjct 88735 TCGGTTTCAACAAAGGCTGGAAGAGCAATAGAAGCCAAGTTACAGACAGCAGTCTCTTCC 88794 Query 79651 GCATCCGCATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAATTT 79710 | | |||| | |||||| ||| |||||| | |||||| || || || Sbjct 88795 GGGGAAGAGTATTCAACAATTTCACAGCAAAGGTTAGAGGATTTAATGACACCCAAGTTC 88854 Query 79711 TGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCA 79770 | || ||| | ||||||||||| ||||||||||| || ||||| |||||||||||||| Sbjct 88855 TTCTGGTTAGTTTTTTTGTTACAAGCATCCTTATACAGCATGAATGGAGTACCAGTTTCT 88914 Query 79771 ATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATA-GACTTGTATCT 79829 | || | || | || || | ||| | | | || || || | | ||| | Sbjct 88915 GTTTGTGCCTCAAGGATGGCGTACCAAAGCTTTTGGGCTTTGATGGTTTGTCTTCCACGA 88974 Query 79830 CTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAA 79889 | || || |||||||| | || ||| || || || ||||| | || ||| | | Sbjct 88975 CCTTCCT-TTTCGTATCTTTCGTACAATTCCTCAAATTCATCTCCATAGACGTCGGCAAG 89033 Query 79890 TCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCAT 79949 |||||| ||| ||| | | || | ||| || |||| | | ||||| |||||| Sbjct 89034 GCCAGGAGCTTCACTTGGAGAGAACAGGGTCCAATCGCCATTCTGTTCTACTCTTTTCAT 89093 Query 79950 AAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCC 80009 || |||||||| ||||| | ||| |||| ||||| | ||| |||||| || || Sbjct 89094 GAACAGATCAGGGATCCACAAAGCGGGGAATAAGTCTCTAGCTCTGATCTCCTCTTTACC 89153 Query 80010 TGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATAT 80069 ||||| || ||| | ||| || | || || | |||||| || |||||||| | Sbjct 89154 ATGGTTCTTACGAATATCAATGAAGGCAAAGATGTCGGCATGCCATGGCTCCAAGTACAA 89213 Query 80070 GGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATA 80129 || | | || || |||||||| || || || || | || | ||| ||||| || | Sbjct 89214 AGCAAATGCACCAGGACGTTTGTTACCACCTTGGTCAACATAACGAGCAGTGTTGTTGAA 89273 Query 80130 AACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCC 80189 || |||| |||||||||||||||||| || ||||| || || || | || ||| ||| Sbjct 89274 GACCCTCACCATTGGAATAATACCATTCGAAGTACCGTTAGTACCAGCAATGTAGGATCC 89333 Query 80190 ACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGC 80249 |||||||||||||| ||| | ||| ||||| || || |||| |||||||| || Sbjct 89334 TGTGGCACGAATATTATGAATGTGCAAACCAATTCCACCAGCAGTTTTGGAGATTAAAGC 89393 Query 80250 GCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAA 80309 ||| || || ||||| || ||||| || || ||||| |||| || || || Sbjct 89394 ACATTCCTTCAAAGTATCGTAAATGCCTTCAATTGAGTCATCCCGCATGGCAACTAAGAA 89453 Query 80310 ACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGT 80369 ||| |||||||| | || || || || ||||| | |||||||| || || || Sbjct 89454 ACATGATGACATTTGTGGGTGAGGGGTACCAGCGTTAAACAGAGTAGGAGAGGCATGAGT 89513 Query 80370 AAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATG 80429 || | || | | || | || || || |||||| || | | || || ||| Sbjct 89514 GAAATACTTCTGACTCATAAAGTTATAAGTTTCAATAACTCTTGCAATGTCATCACCATG 89573 Query 80430 AATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTAT 80489 ||| || | || |||||||| | || ||| ||||| | ||| | | || ||| || Sbjct 89574 AATGCCGATAGCAACACGCATAATCAAGTGTTGAGGACGTTCTGCAACATTACCATTAAT 89633 Query 80490 TTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCG 80549 | ||| | ||||||| ||||||| || || || ||||| ||||| || |||||||| Sbjct 89634 TCTCAGAAGGTAAGATCTTTCCAAGGTCTTGAATCCAAAGTAGTTATACTGAAAGTCTCT 89693 Query 80550 TTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGTGAT 80609 ||||| | |||| | ||||| || | ||| | ||| | || | | ||| Sbjct 89694 ATCGTAGACAATAGCAGAGTTCAGCTCATCAGCGTGTTTCTGGACAATGTTGTAAGTG-- 89751 Query 80610 ACTT--GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCC 80667 ||| |||| | ||||| ||||| || || || || || | || | | || || Sbjct 89752 TCTTCAGAAACCAGAGGAGAGTGTTTTCCGTTCTTTGGGTTGATGTATTCATACAACTCT 89811 Query 80668 TCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTG 80727 | | || | | || | || | || | ||||||| ||| || || || ||||| Sbjct 89812 TTGGTTACCTGAGAGTATTGCTTAGTGGTCTGTTTGTGTAAATTGGAAACAGCAATTCTT 89871 Query 80728 GCGGCTAAAATGGCATAATCTGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCC 80787 || || |||||||||||||| || || || || | ||| || | || || || Sbjct 89872 GCTGCCAAAATGGCATAATCGGGGTGAATAGTGGTCATATAGGCAGCAGTCTCAGCAGCA 89931 Query 80788 AGAGTGTCCAATTCTACCGTTGTTACTCCATTATA 80822 || |||||| || || || ||||| || | ||| Sbjct 89932 AGGTTGTCCAGCTCCACGGTAGTTACACCGTGATA 89966 >seq27 Length=164711 Score = 183 bits (202), Expect = 4e-41 Identities = 579/883 (66%), Gaps = 16/883 (2%) Strand=Plus/Plus Query 49669 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 49728 |||||||| ||| || | |||||||| || || ||||| || |||| || || || Sbjct 105991 TTTTGGTAATCAGAAACTCTCTTTTCGAAGAAGTTGGTTTTACCGGCCAAAGAAATGTTC 106050 Query 49729 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 49788 |||||||| ||||| |||||| | || || || | ||||| |||| | | Sbjct 106051 TCCATGAAGTCAAATGGATTGTTGACGTTGTACACCTTTTTGTTGCCCAGAGCTACCAGT 106110 Query 49789 AATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTA-TAAG 49847 | ||| || || || || || | ||| ||||| || ||||| || | |||| Sbjct 106111 AGTCTGTCAGCAACGAACTCAACATACTGGCACATCAAGCTGCAGTTCATCCCCAGTAAG 106170 Query 49848 TTTAACTGGAAGAGCCGCAGT-AAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAA 49906 | | |||||||| | || ||| | | || ||| || || || ||||| |||| Sbjct 106171 GAGA-CAGGAAGAGCGTCTGTGAAGTACCTTTT-TTCGATCTCGACAGCCTCTGTGATAA 106228 Query 49907 TAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGA 49966 | | |||| |||| ||||| | | || |||||| ||| | ||| || || | Sbjct 106229 TCTTTTCAACGATTTCCTCACTGGCTCTATTGTTTAAATGAGAAAATAGCAAGCAAGCAA 106288 Query 49967 AATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCA 50026 | || ||| | ||||||||||| | ||| || || ||||| || || | || |||| Sbjct 106289 AGTCAGTGTGTAATCCCTCGTCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCTGGCA 106348 Query 50027 TTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTT 50086 | || || | ||| || | ||| || || || ||||| || || ||||||||||| || | Sbjct 106349 TGAGACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAAGATCCTGAAAAGAAGATACCCT 106408 Query 50087 CTACTGCGGCAAAGGCAACAAGTCTCTC-TCCATAACTG--GCGCTGTCATGTATCCA-C 50142 | || || || |||||||| | | || | | | || || ||| ||||| | Sbjct 106409 CAACAGCAGCGAAGGCAACCAAACGTTCAGCGAACAATGCATCGTCATCAGAAATCCATC 106468 Query 50143 TTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGA 50202 | || ||||| || ||||| | ||| | ||| || || || || |||||||| || || Sbjct 106469 TCATG-GCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTCGATGGCATTGAACAGG 106527 Query 50203 TAGtttttttCATTACTATCTTTAACATAAGTATCGATCA--AAAGACTATACATTTCCG 50260 | | || || |||||| | |||||||| |||| || || || | || | Sbjct 106528 AATTCAGACTCTTTTGGATCTTTGATGTAAGTATCAATCAGCAAGGA--GTAAGTCTCGG 106585 Query 50261 AATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCA 50320 | |||||||| || || ||||| || ||||| || ||| | || |||| || || | Sbjct 106586 AGTGAATGTTCTCCATCATGATCTGGAAACCGTAAAAGCATTTTGCTTCGGGAAGTTGAA 106645 Query 50321 CTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAA 50380 | || | || || ||| | || |||||||| || || |||||| ||| ||||| | Sbjct 106646 CCTCAGCACTGAAATTTTCCACCAAGTTTTCATTGACAATACCGTCAGAGGCAGCAAAGA 106705 Query 50381 ACGCCAATACATGTTTTATAAAATGTTTTTCGT--TGGGTGTTA-GTTTATTCCAATCAT 50437 | || | || || || |||||| | | | | || | |||||||| |||| Sbjct 106706 AGGCAAGGACTCTCGAGATGAAGAATTTTTCATTATCGTTCATACGATTATTCCAGTCAT 106765 Query 50438 TGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTAT 50497 | ||| ||| | |||| ||| || | |||||||| || || || |||| || | Sbjct 106766 GCAAATCCTTACCCAGGTCTATTTCCTCAGCAGTCCAAAAGGAAGCTTCGGCCTGCTTGT 106825 Query 50498 ACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAA 50540 |||| | |||||| || || || | | ||||| | ||||| Sbjct 106826 ACATTTGCCAGATATCGTGGTACTTCAAAGGGAAGAGCACAAA 106868 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718267525072880