Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016555.1_202016-02-08]
142 sequences; 9,351,707 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq30 167 6e-36
>seq30
Length=271157
Score = 167 bits (184), Expect = 6e-36
Identities = 771/1203 (64%), Gaps = 34/1203 (3%)
Strand=Plus/Minus
Query 363380 AGTATGA-TATTTTCGGATATAAGACGATGGAGAAATCCTACCTATCTC-GTATCAATGG 363437
||||| | || ||| |||| ||||| |||| | ||| ||||| ||| | || |||||
Sbjct 89683 AGTATAACTACTTT-GGATTCAAGACCTTGGAAAGATCTTACCT-TCTGAGAATTAATGG 89626
Query 363438 TGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCC 363497
| || ||| ||||| || || || || | |||||||||||||| || || ||| |
Sbjct 89625 TAATGTTGCAGAACGTCCTCAACACTTGATTATGCGTGTTGCTATCGGCATTCATGGTGA 89566
Query 363498 GGATGTTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTA-TTCACGCACG 363556
|| ||| | |||||||| ||||| || | ||| | ||| ||||| || |
Sbjct 89565 TGACATTGCAAGAGTTATTGAAACTTATAACTTTATGAGT-CAGAAGTATTTCACTCATG 89507
Query 363557 CCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTT- 363615
|| | || || ||| || ||||| || | | | ||||| ||||| || || ||||||
Sbjct 89506 CCTCTCCTACTCTGTTTAACGCTGGTACCCCTCACCCACAAATGTCATCATG-TTTCTTA 89448
Query 363616 CTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTT 363675
| ||| ||| || || || || || || | || || | ||| | |||||| |
Sbjct 89447 GTTGCCATGCGGGATGACTCAATTGAAGGCATTTACGATACTTTGAAGGAATGTGCTTTA 89388
Query 363676 ATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTG-CACAGAACAG 363734
|| ||||| | ||| || ||||||||| | || || ||| |||||| ||||| |
Sbjct 89387 ATCTCCAAAACTGCTGGTGGAATTGGTTTGCACATTCATAATATTCGTGCCACAGGA-TC 89329
Query 363735 TTACATTCGCGGCACAGGGGGATAC-TCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTG 363793
|||||| || || || ||| |||||||| | |||| ||| | | || ||
Sbjct 89328 CTACATTGCTGGTACTAACGG-TACTTCGAATGGTATTATTCCAATGGTGAGGGTCTTCA 89270
Query 363794 ACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGT 363853
|||| ||||| | || || ||||| ||||| || || || || |||||| |||
Sbjct 89269 ACAACACTGCTCGTTATGTTGACCAAGGTGGTAACAAACGTCCTGGTGCATTTGCTTTGT 89210
Query 363854 ATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAA 363913
| | ||||| |||||||| || |||| || |||| | || || ||| || |
Sbjct 89209 ACTTGGAGCCATGGCATGCCGACATCTTTGCCTTCATTGATATTCGTAAGAACCATGGTA 89150
Query 363914 AAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGA 363973
||||||| | | || | || | ||| || | ||| | |||| | || ||||
Sbjct 89149 AAGAGGAGATCAGAGCTAGAGACTTATTCCCCGCTTTGTGGATCCCTGATCTGTTCATGA 89090
Query 363974 AGCGCGTGGAGGCAG-GTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTT 364032
| | || || ||| | ||||| | || || | ||| ||| ||| || |||
Sbjct 89089 AAAGAGTAGA-ACAGAATGGCGATTGGACCCTGTTCTCTCCAAGTGAAGCTCCTGGCCTT 89031
Query 364033 TCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAG 364092
|||| || | || || || | || | | ||||||| || ||| | |||| |
Sbjct 89030 GCCGACGTCTATGGAGATGAATTTGAGGAATTGTACGAAAGATACGAA----AAGGAAGG 88975
Query 364093 GCTCGTAAGACA----ATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGAT 364148
| | |||||| || || || ||||| |||| |||||| | || | || |
Sbjct 88974 TCGTGGAAGACAAACCATCAAAGCCCAAAAGCTTTGGTACGCCATCCTTGAGGCACAAAC 88915
Query 364149 TGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCA 364208
|| || || || || | ||| |||| || ||| | || ||| || | |||||| |
Sbjct 88914 AGAAACTGGTACTCCATTCATGCTGTATAAGGATGCTTGTAACAAAAAAACTAACCAGAA 88855
Query 364209 GCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCC 364268
| || | ||| ||| | ||||| || || ||| |||||||| | | ||
Sbjct 88854 GAACTTGGGTGTCATTAAATCCTCTAACCTTTGCTGTGAAATTGTTGAATACTCTTCCCC 88795
Query 364269 CGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT---AAAAGA 364325
|| |||||||| || |||||| | || || || || ||||| || ||||| || ||
Sbjct 88794 GGAAGAGACTGCTGTCTGTAACTTGGCTTCTATTGCTCTTCCAGCCTTTGTTGAAACCGA 88735
Query 364326 TGGTACT------TTTGACCAC---CAGCATCTTTATGACGTAACCTATCATGCTACTTG 364376
|| |||| | || || | | || |||| | ||| | | |||| |
Sbjct 88734 TGATACTCACTGCTGGTACAACTTTGAAAAGCTGCATGAAATCACCAAAGTGGTTACTCG 88675
Query 364377 CAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAA 364436
|| | ||| ||||||||| |||| ||| || |||| ||||| | | || ||
Sbjct 88674 TAACTTGAACAGAATTATCGACAGAAATTTTTACCCCGTTCCAGAAGCTAGGAGATCGAA 88615
Query 364437 TATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCT 364496
||||||| || | || || | | | ||||| || || | ||||| | |||||||| | |
Sbjct 88614 TATGCGTAATAGACCTATAGCTGTGGGTGTTCAAGGTTTAGCTGATGCTTTTATGAAGTT 88555
Query 364497 CAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAAT 364556
| || | |||||||| || || || || |||| |||| |||||||| ||
Sbjct 88554 GAGAATTCCTTTTGATTCTCCAGAAGCCAAACAGCTTAATATTCAGATTTTTGAAACTAT 88495
Query 364557 GTA 364559
||
Sbjct 88494 CTA 88492
Score = 84.2 bits (92), Expect = 6e-11
Identities = 224/337 (66%), Gaps = 8/337 (2%)
Strand=Plus/Minus
Query 364753 CCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTT 364812
|| |||||||| ||||| ||| | || || || || |||||||||| |||||||| |
Sbjct 88298 CCTATGCCCACTGCTTCAACTTCCCAAATTCTGGGTTACAACGAGTGTTTCGAACCTTAC 88239
Query 364813 ACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTAC 364872
|| ||| | || |||||||| || | | |||||||||| | |||||| |||
Sbjct 88238 ACTTCCAACATCTACTCACGCCGTGTATTAGCTGGAGAATTTCAAATTGTTAATCCTTAC 88179
Query 364873 CTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCATC 364932
|| | ||||| || || || |||| || | |||||| || |||||||
Sbjct 88178 TTATTGCGTGATCTAGTGGATTTGGGTCTTTGGGACGATAACATGAAAAATCATATCATT 88119
Query 364933 GCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAA--GCCTATTT 364990
| | || || ||| | || || | || | || || | || || |||| ||
Sbjct 88118 TCAGACAACGGCTCTATTCAAAATTTGCCCAACATACCTGAGCAACTTAAAGGCCT--TT 88061
Query 364991 ACAAAACCGTATGGGAAATTTC-CATGCGAACTCTCATTGATATGGCGGCCGATCGCGGT 365049
|||| || || ||||| ||||| || || || | ||||||||||| |||||| |
Sbjct 88060 ACAAGACTGTTTGGGAGATTTCTCAAAAGA-CTATTATTGATATGGCTGCCGATAGATCA 88002
Query 365050 GCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCA 365086
|| | |||| ||| |||||||| ||| |||||
Sbjct 88001 GCCTATATCGATCAATCTCAGTCGTTGAAC--ATTCA 87967
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303351228711044
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |