Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016555.1_202016-02-08]
142 sequences; 9,351,707 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq4 120 2e-22
seq8 105 5e-18
>seq4
Length=598418
Score = 120 bits (132), Expect = 2e-22
Identities = 158/219 (72%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 16721 CTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCG 16780
|| || |||| |||| || ||||||||||| ||||||||||| | || ||| | |
Sbjct 79265 CTAAGGACCAAGTGCAAAGTAGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCA 79206
Query 16781 TCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTG 16840
||||||||||| || || ||| | || || ||||||||||| ||| | ||||| |||
Sbjct 79205 TCCTCCAATTGCTTACCAGCAAAGATCAGACGCTGTTGGTCAGGAGGAATTCCCTCCTTG 79146
Query 16841 TCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900
|| ||| | ||| || | | | | ||||||| | |||| |||| ||||||
Sbjct 79145 TCCTGAATCTTGGACTTGACGTTGTCAATAGTGTCGGAAGACTCCACCTCCAAGGTGATA 79086
Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTG 16939
|| || ||||| || || || || ||||| |||||||||
Sbjct 79085 GTCTTACCGGTAAGGGTCTTTACGAAAATTTGCATTTTG 79047
>seq8
Length=658282
Score = 105 bits (116), Expect = 5e-18
Identities = 154/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 16721 CTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCG 16780
||||| |||| |||| || |||||||| || ||||||||||| | || ||| | ||
Sbjct 86105 CTCAGAACCAGGTGCAAAGTAGACTCCTTCTGGATGTTGTAGTCAGACAGAGTTCTACCG 86046
Query 16781 TCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTG 16840
|| |||| ||| || || ||| |||| | || |||||||| ||| | || || |||
Sbjct 86045 TCTTCCAGTTGCTTACCAGCAAAAATCAAACGTTGTTGGTCAGGAGGAATTCCTTCCTTG 85986
Query 16841 TCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900
|| ||| | ||| || | | | | |||||| || ||| ||||| ||| ||
Sbjct 85985 TCTTGAATCTTGGACTTGACATTGTCGATGGTGTCGGAGGACTCGACTTCCAAGGTAATA 85926
Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTT 16938
|| || ||||| | || ||||| ||||||||||||||
Sbjct 85925 GTCTTACCGGTTAAGGTCTTGACGAAAATCTGCATTTT 85888
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 405087298944580
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |