Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016555.1_202016-02-08] 142 sequences; 9,351,707 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq27 170 2e-37 seq35 82.4 9e-11 >seq27 Length=164711 Score = 170 bits (188), Expect = 2e-37 Identities = 583/901 (65%), Gaps = 17/901 (2%) Strand=Plus/Plus Query 92790 CATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTC 92849 ||| ||||| |||||||| || |||| | ||||| ||||| || || || || | Sbjct 105978 CATGACACCTGCCTTTTGGTAATCAGAAACTCTCTTTTCGAAGAAGTTGGTTTTACCGGC 106037 Query 92850 CAAAGATATCGAATTCACTA-GTGAT-TGGATTCTTGGCGTTATAATACTTTTCACCGAT 92907 |||||| || | || | || | |||||| ||| |||| || ||||| | Sbjct 106038 CAAAGAAATGTTCTCCATGAAGTCAAATGGATTGTTGACGTTGTACACCTTTTTGTTGCC 106097 Query 92908 CAACTCGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATT 92967 || | || || ||| ||||| || || || | ||||| ||||||| || || Sbjct 106098 CAGAGCTACCAGTAGTCTGTCAGCAACGAACTCAACATACTGGCACATCAAGCTGCAGTT 106157 Query 92968 CATTCCTAG-AAGACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGG 93026 ||| || || ||| | ||||| |||||||| || ||| | ||| ||||| | || | Sbjct 106158 CATCCCCAGTAAGGAG-ACAGGAAGAGCGTCTGTGAAGTACCTTTTTTCGATCTCGACAG 106216 Query 93027 CTTCTTTCAAGATTTCTATTAC--TCTACTATTTGG---TGGTTTTTGTACGACATAATT 93081 | ||| | | || | | || | | || ||| | | ||| | || | ||| Sbjct 106217 CCTCTGTGATAATCTTTTCAACGATTTCCTCACTGGCTCTATTGTTTAAATGAGAAAATA 106276 Query 93082 GTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCT 93141 | | |||| |||||||| || ||||| || ||||||| | || | ||||||| Sbjct 106277 GCA-----AGCAAGCAAAGTCAGTGTGTAATCCCTCGTCTCTGCAAATAAGCTCATTGGA 106331 Query 93142 GAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACC 93201 ||| || |||||||| | || |||| ||||| | ||| || || ||||||||| || Sbjct 106332 GAAGGTCAAACCTGGCATGAGACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAAGATCC 106391 Query 93202 AGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGA 93261 ||||| || ||||| || || || || || || || | |||||| || || ||| Sbjct 106392 TGAAAAGAAGATACCCTCAACAGCAGCGAAGGCAACCAAACGTTCAGCGAACAATGCATC 106451 Query 93262 ATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTC 93321 | | |||||| | | ||||| || || |||| || ||||| || | || || Sbjct 106452 GTCATCAGAAATCCATCTCATGGCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTC 106511 Query 93322 GATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAG 93381 ||| || || || ||| | || ||| | | |||| ||||| ||||| || | || Sbjct 106512 GATGGCATTGAACAGGAATTCAGACTCTTTTGGATCTTTGATGTAAGTATCAATCAGCAA 106571 Query 93382 AGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGC 93441 || || | || || || | |||||||| || ||||| ||||| || ||| | || Sbjct 106572 GGAGTAAGTCTCGGAGTGAATGTTCTCCATCATGATCTGGAAACCGTAAAAGCATTTTGC 106631 Query 93442 TTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATC 93501 ||| | | || || || | || | || || | ||||||||||| ||||| || Sbjct 106632 TTCGGGAAGTTGAACCTCAGCACTGAAATTTTCCACCAAGTTTTCATTGACAATACCGTC 106691 Query 93502 GGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTT---TAAG 93558 || || ||||| || || | | | || || ||| |||| ||| | || | Sbjct 106692 AGAGGCAGCAAAGAAGGCAAGGACTCTCGAGATGAAGAATTTTTCATTATCGTTCATACG 106751 Query 93559 CTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGC 93618 |||| ||| || | ||| || || || | ||| || |||||||||| || || Sbjct 106752 ATTATTCCAGTCATGCAAATCCTTACCCAGGTCTATTTCCTCAGCAGTCCAAAAGGAAGC 106811 Query 93619 TTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAAACG 93678 ||| || | |||||||| | ||| || || || || | | || || | |||||||| Sbjct 106812 TTCGGCCTGCTTGTACATTTGCCAGATATCGTGGTACTTCAAAGGGAAGAGCACAAAACG 106871 Query 93679 A 93679 | Sbjct 106872 A 106872 >seq35 Length=230142 Score = 82.4 bits (90), Expect = 9e-11 Identities = 63/71 (89%), Gaps = 3/71 (4%) Strand=Plus/Minus Query 126272 TTGGCCGAGT-GGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAG-CGTGGGTT 126329 |||||||||| |||||||||||||||||| | | |||||| | ||| |||| |||||||| Sbjct 189003 TTGGCCGAGTTGGTCTAAGGCGCCAGATTAAGGTTCTGGT-CTCTCCGGAGGCGTGGGTT 188945 Query 126330 CGAACCCCACA 126340 ||||||||||| Sbjct 188944 CGAACCCCACA 188934 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556859811572080