Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016555.1_202016-02-08]
142 sequences; 9,351,707 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq6 226 1e-53
seq22 179 1e-39
seq21 158 5e-33
seq24 149 2e-30
seq8 127 8e-24
seq4 104 9e-17
>seq6
Length=682714
Score = 226 bits (250), Expect = 1e-53
Identities = 863/1325 (65%), Gaps = 51/1325 (4%)
Strand=Plus/Minus
Query 451193 GGAAAGCCCTATATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAA 451252
|||||||| |||| ||||| | | ||| ||||| ||||| ||| || |||||
Sbjct 394746 GGAAAGCCTAATATCCAAGTCGAATTTAAGGGTGAGACTAAGGTTTTCAGCCCCGAAGAG 394687
Query 451253 ATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCA 451312
||||| || |||||||| || |||||||| || || || || || ||| | ||| |
Sbjct 394686 ATTTCCTCCATGGTTCTAACAAAAATGAAGGATACTGCTGAGCAGTATTTGGGTGAGAAA 394627
Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372
| | |||||||| | |||||||| ||||| |||||||| | ||| | ||||| ||
Sbjct 394626 ATCAACGATGCAGTTGTCACTGTTCCTGCTTACTTCAATGACTCTCAAAGACAAGCCACC 394567
Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432
|| ||||| || ||||||||||| || |||| |||| |||||||| || || ||
Sbjct 394566 AAGGATGCTGGTTTGATTGCTGGTTTGAACGTTCAAAGAATCATTAATGAGCCCACCGCT 394507
Query 451433 GCTGCTCTAGCATA-----TGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTT 451487
|| || | || || ||||| || | || | | || | || | || |||
Sbjct 394506 GCCGCAATTGCTTACGGGTTGGACAAGAAGGAT-GCAGGCCAC-GGTGAGCACAACATTC 394449
Query 451488 TAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGG 451547
|| | || ||| | |||||||||||| ||| |||| |||| || ||||| || |||
Sbjct 394448 TAATCTTCGATCTAGGTGGAGGAACTTTCGATGTTTCTCTACTATCTATTGATGA--GGG 394391
Query 451548 TATTT--GAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605
||||| ||||| ||||| ||| ||||| || || | || ||||| || | |||||
Sbjct 394390 TATTTTCGAAGTCAAGGCCACCGCAGGTGACACCCACTTGGGTGGTGAGGACTTCGATAA 394331
Query 451606 TGCAATTGTGGAATGGTTGAAAACTGATGTTCAA-CGAAA-ACTAAAAGTAGATATTTCT 451663
| | || | || | | || |||||| |||| || || | |||| |||||
Sbjct 394330 CAGATTAGTCAACCACTTTATCGCCGA-GTTCAAGAGAAAGACCAAGA-AAGATCTTTCT 394273
Query 451664 ACTAACCAAAAAGCACTTAGACGTCTTAAAAC-----ATCAGCAGAAAAAGCTAAAATTA 451718
|| ||||| | | | |||||| | || | ||| | ||| |||| || ||
Sbjct 394272 ACAAACCAGAGATCCCTTAGAAGACTAAGAACCGCTTGTGAGCGTGCAAAGAGAACTTTG 394213
Query 451719 CACTCAGTTCAACACAAACTACTAGTATAAACATTGATAGTTTAGTTGATGGAATGGATT 451778
|| ||| | || || || || | |||||| ||| | || || || ||
Sbjct 394212 TCTTC--TTCTGCTCAGAC--CT-CCATCGAGATTGATTCTTTGTTCGAGGGTATCGA-- 394160
Query 451779 ATGCTACTACTC--TTACCCGTGCTAAATTTGAATCAATTTGTTCCAGTATTTTTGCACG 451836
| |||| ||| | || | |||| ||| || | ||| || | || | ||
Sbjct 394159 CTTCTACACCTCGATCACTAGAGCTAGATTCGAGGAGCTCTGTGCC--GACTTGTTCAGA 394102
Query 451837 GGTA--ATGAAACCTGTTGATCAAGTATTACATGATTCTAAAATTAGTAAAGATAAAATT 451894
| || | |||||||| ||| || | || || || | ||| | || ||
Sbjct 394101 TCCACCATCGAGCCTGTTGAGAGAGTCTTGAAAGACTCCAAGTTGGACAAATCTCAAGTT 394042
Query 451895 GATGAAATTGTGCTTGTAGGAGGTTCTACACGAATTCCTAAAATTCAAGATATGTTGTCT 451954
|||| ||||| | || || |||||||| ||||||| || ||| ||| || | || |
Sbjct 394041 CATGAGATTGTTTTGGTTGGTGGTTCTACCAGAATTCCAAAGGTTC-AGAAAT-TAGT-T 393985
Query 451955 TCTTA-TTTTGGA--GGAAAACAACTATGTAAGAGCGTAAATCCTGATGAAGCTGTTGCA 452011
||| | |||| | || || | | | ||| | | || || || ||||| ||||||
Sbjct 393984 TCTGACTTTTTCAATGGTAAGGAGCCAAACAAGTCCATCAACCCAGACGAAGCCGTTGCA 393925
Query 452012 TATGGTGCTGCAGTTCAAGCAGCTATTCTAACAGGTTCAGA---TGATGAAAAATTAGGA 452068
||||||||||| || |||||||||||| | | || ||| | | || | |
Sbjct 393924 TATGGTGCTGCTGTCCAAGCAGCTATTTTGTCTGG---AGATACTTCTTCCAAGACACAA 393868
Query 452069 GATATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGAGTTGAAACAGCTGGTGGAATG 452128
|| | | || | ||||| | ||||||||| | || ||||||| |||||||| ||
Sbjct 393867 GACTTGTTATTGCTGGATGTTGCTCCTCTATCTTTGGGTATTGAAACCGCTGGTGGTATC 393808
Query 452129 ATGACTAATTTAATTAAACGAGGAACTTC-TATTCCTTGTAAAAAGAGTC--AAACATTT 452185
||||| || | || | || |||| | | ||| | |||| |||| ||| |||
Sbjct 393807 ATGACCAAGCTGAT--CCCAAGAAACTCCACAATCCCAGCCAAAA-AGTCAGAAATCTTT 393751
Query 452186 AGTACAGCAAGTGATAACCAACCAGGTGTAACTATTCAAGTGTTTGAAGGAGAACGTGCA 452245
||| ||| |||||||||||||| |||||||| |||||||| || | |
Sbjct 393750 TCGACATATGCTGACAACCAACCAGGTGTTTTGATTCAAGTCTTTGAAGGTGAGAGAACT 393691
Query 452246 ATGACACGAGATAATAATAAACTAGGAGAATTTACTCTTTCAAACATTCCTCCTATGCCA 452305
| || || || || | || | ||| ||||| ||||||||| |||
Sbjct 393690 AGAACCAAGGACAACAACCTGTTGGGTAAGTTTGAACTTTCTGGTATTCCTCCTGCTCCA 393631
Query 452306 AGGGGAACTCCTCAAATTGAAATTACCTATGATGTTGATGCAAATGGTATTCTTAATGTG 452365
|| || |||||||||||| | |||| ||| | ||||| || |||||| | |||||
Sbjct 393630 AGAGGTGTTCCTCAAATTGAGGTCACCTTCGATATGGATGCCAACGGTATTTTGAATGTA 393571
Query 452366 AGTGCAGTTGAAAAATCATCTGGAAAATCAGAAAAAATTACAATTACTAATGATAAAAAC 452425
||| ||||| || | || || | |||| ||||| ||||| || |||||
Sbjct 393570 TCTGCTGTTGAGAAGGGTACCGGTAAGACTCAAAAGATTACTATTACCAACGATAAGGGA 393511
Query 452426 CGTTTATCTAAAGAAGATATTGAAAAAATGGTAGATGAAGCAGAAAAATTCAAGGATGAT 452485
| || || || ||||| || || | |||||| |||||| |||||||||||||||||
Sbjct 393510 AGATTGTCCAAGGAAGACATCGAGAGAATGGTTTCTGAAGCTGAAAAATTCAAGGATGAA 393451
Query 452486 GATGA 452490
|| ||
Sbjct 393450 GACGA 393446
Score = 84.2 bits (92), Expect = 9e-11
Identities = 100/136 (74%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 163325 AAAAAGTTGGAAATTTTAAAATAGAACCTCCTGGTATATTTTTAGGTAGAGGTTCCCATC 163384
||| ||| |||||||||| ||||||||| ||||| | ||| ||| || ||| ||||
Sbjct 368969 AAAGAGTGGGAAATTTTAGAATAGAACCACCTGGACTCTTTAGAGGAAGGGGTAGTCATC 369028
Query 163385 CAAAAATAGGAAAATGGAAAAGAAGAATATATCCAGAAGATGTTATTTTAAATTTAGATA 163444
| || | || | | ||| | |||||||||||| |||||||| | ||| || || |
Sbjct 369029 CGAAGACTGGCAGAGTGAAGAAAAGAATATATCCCGAAGATGTAAGTTTGAACTTGAGTG 369088
Query 163445 AAAATGCACCTATTCC 163460
|| |||| || |||||
Sbjct 369089 AAGATGCTCCAATTCC 369104
>seq22
Length=213759
Score = 179 bits (198), Expect = 1e-39
Identities = 174/224 (78%), Gaps = 0/224 (0%)
Strand=Plus/Plus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | |||||||| || || || |||||||| ||||| |||||||| || || |||||
Sbjct 113 ATGCAGATTTTCGTCAAGACTCTAACTGGTAAGACTATCACTCTTGAGGTAGAGTCATCA 172
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|||| ||||| | ||| || |||||||| |||||||| ||||||||||| ||
Sbjct 173 GATACTATTGATAACGTCAAATCTAAGATTCAAGACAAGGAAGGTATTCCTCCTGACCAG 232
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
|||||||| || ||| | || || ||||| ||||| || |||||| | | ||||| |||
Sbjct 233 CAACGTTTGATCTTCGCTGGTAAGCAACTGGAAGACGGTAGAACTCTTTCTGATTACAAT 292
Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273
||| | ||||| | || |||||||| ||||||||||| |||||
Sbjct 293 ATTCAAAAGGAATCCACTCTTCACTTGGTATTAAGACTTAGAGG 336
>seq21
Length=97380
Score = 158 bits (174), Expect = 5e-33
Identities = 170/225 (76%), Gaps = 0/225 (0%)
Strand=Plus/Plus
Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108
|||| | ||||| |||||||| || || ||||| ||||| |||||||| || || |||||
Sbjct 97073 AATGCAGATTTTTGTTAAAACCCTAACAGGTAAGACTATCACTCTTGAGGTGGAGTCATC 97132
Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168
|| | ||||| | | ||| || ||||||||||||||||| ||||||||||| ||
Sbjct 97133 AGACACTATTGATAATGTCAAATCCAAGATTCAAGATAAGGAAGGTATTCCTCCTGACCA 97192
Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228
|||||||||||||| | || || ||||| ||||| || |||||| | | ||||| ||
Sbjct 97193 GCAACGTTTAATTTTTGCTGGTAAGCAACTGGAAGACGGTAGAACTCTTTCTGATTACAA 97252
Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273
|| | ||||| | || || ||||| || ||||| | || ||
Sbjct 97253 CATCCAAAAGGAATCCACCCTCCACTTGGTTCTAAGATTAAGGGG 97297
>seq24
Length=437955
Score = 149 bits (164), Expect = 2e-30
Identities = 282/413 (68%), Gaps = 3/413 (1%)
Strand=Plus/Minus
Query 451193 GGAAAGCCCTATATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAA 451252
|||||||| | |||||||| | | |||||||| ||||| || |||| |||||
Sbjct 91936 GGAAAGCCAAACATTCAAGTTGAATTCAAAGGTGAGACTAAGGTCTTCACTCCAGAAGAG 91877
Query 451253 ATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCA 451312
|| || || |||||| | || || ||||| || || || || |||| |||||
Sbjct 91876 ATCTCTTCCATGGTTTTGACCAAGATGAAGGACACTGCTGAGCAATTCCTTGGTGACAAG 91817
Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372
|||| ||||| || | ||||| || ||||| ||||| || | || | || || |||
Sbjct 91816 GTTAACGATGCCGTTGTCACTGTCCCAGCTTACTTCAACGACTCTCAGAGACAGGCCACT 91757
Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432
|| ||||| || | ||||| ||||| || ||| | |||| || || || || || ||
Sbjct 91756 AAGGATGCTGGTCTCATTGCCGGTTTGAACGTTATGAGAATCATCAACGAGCCAACCGCT 91697
Query 451433 GCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTA 451492
||||| | || || || | ||| || ||||| | || || || || | |
Sbjct 91696 GCTGCCATTGCCTACGGTTT-GGACAA--AAAAGCTGAGGGTGAGAAGAACGTTCTGATC 91640
Query 451493 TTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTT 451552
|| || || |||||||||||| ||| |||| | || || |||||||| || | ||
Sbjct 91639 TTCGACTTGGGTGGAGGAACTTTCGATGTTTCTTTGCTGTCCATTGAAGACGGTATTTTC 91580
Query 451553 GAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605
|| || ||||| || |||||| ||||| |||| ||||| || |||| ||
Sbjct 91579 GAGGTCAAGGCTACTGCTGGTGACACTCACTTAGGTGGTGAGGACTTTGACAA 91527
>seq8
Length=658282
Score = 127 bits (140), Expect = 8e-24
Identities = 163/225 (72%), Gaps = 0/225 (0%)
Strand=Plus/Plus
Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108
|||| | |||||||| || || | || ||||| |||||||| | || || || || ||
Sbjct 85890 AATGCAGATTTTCGTCAAGACCTTAACCGGTAAGACTATTACCTTGGAAGTCGAGTCCTC 85949
Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168
|| | ||| || | | || || |||||||| |||||||||||||||||||| ||
Sbjct 85950 CGACACCATCGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGAATTCCTCCTGACCA 86009
Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228
||||||||| ||||| | || || ||||| ||||| || |||||| || | || || ||
Sbjct 86010 ACAACGTTTGATTTTTGCTGGTAAGCAACTGGAAGACGGTAGAACTCTGTCTGACTACAA 86069
Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273
|| | ||||| | || | ||| | || | ||| |||||||
Sbjct 86070 CATCCAGAAGGAGTCTACTTTGCACCTGGTTCTGAGATTGAGAGG 86114
>seq4
Length=598418
Score = 104 bits (114), Expect = 9e-17
Identities = 158/225 (70%), Gaps = 0/225 (0%)
Strand=Plus/Plus
Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108
|||| | |||||||| || || || || ||||| ||||| || | || || || || ||
Sbjct 79050 AATGCAAATTTTCGTAAAGACCCTTACCGGTAAGACTATCACCTTGGAGGTGGAGTCTTC 79109
Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168
|| | ||||| | || || ||||| || ||||| |||||||||||||| ||
Sbjct 79110 CGACACTATTGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGAATTCCTCCTGACCA 79169
Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228
||| ||| | || || | || || ||| | || ||||| ||||||||| | || || ||
Sbjct 79170 ACAGCGTCTGATCTTTGCTGGTAAGCAATTGGAGGATGGTAGAACTTTGTCTGACTACAA 79229
Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273
|| | ||||| | || | ||||| || | ||| |||||||
Sbjct 79230 CATCCAAAAGGAGTCTACTTTGCACTTGGTCCTTAGATTGAGAGG 79274
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1975714805427336
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |