Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016555.1_202016-02-08] 142 sequences; 9,351,707 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq17 143 3e-29 >seq17 Length=1275604 Score = 143 bits (158), Expect = 3e-29 Identities = 165/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 153207 ATAGGTCAAGGATACTATGGAACCATTACACCCCCAGTCATACAGCGAAACGTTCTTGAG 153266 || ||| |||||| ||||| ||||||| || || || || | || || | || ||| Sbjct 1240241 ATTGGTAAAGGATTTTATGGCACCATTATCCCTCCTGTGATTCTTCGTAATTTGCTCGAG 1240182 Query 153267 AATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGATTG 153326 ||||| | ||||||||||||||||| || ||||| | || || ||||||| ||||| Sbjct 1240181 AATCCAGGATGGTACACATCTTACACCCCATATCAGCCCGAAGTAAGTCAGGGACGATTG 1240122 Query 153327 GAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTTACAGGATTACCAATAGCAAAC 153386 ||| |||| |||||| |||||| |||||| || || ||||| | || | || || Sbjct 1240121 GAAAGTTTACTCAATTTCCAAACTGTCATCAGTGATCTGACAGGCCTCCCGGTCGCCAAT 1240062 Query 153387 GCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATG 153428 || ||||| || ||||| | ||||||| |||||||||||| Sbjct 1240061 GCTTCTCTTTTGGATGAGTCGTCTGCAGCTGCAGAAGCAATG 1240020 Score = 114 bits (126), Expect = 1e-20 Identities = 168/235 (71%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 154871 TATTATGATTACATACCCATCTACACATGGTGTATTTGAAACTAACATTAGACA-GATAT 154929 ||| ||| |||| ||||| || ||| |||| | |||||| || |||| | | || Sbjct 1238544 TATGATGGTTACCTACCCTTCCACATATGGACTTTTTGAACCTGGTATTATTGATGCCAT 1238485 Query 154930 GTAAGATCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCAC 154989 || ||| | ||| || |||||||||| |||||| | ||||| || || | ||||| | Sbjct 1238484 C-AATATCATCCATAACCATGGTGGTCAAGTATATTTAGATGGTGCTAACATGAATGCTC 1238426 Query 154990 AGGTAGGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATA 155049 | || ||| || || ||| | || || || ||||||||||||||||| ||||||| Sbjct 1238425 AAGTGGGATTAACATCCCCAGGAGACCTGGGAGCTGATGTATGTCATCTAAATTTACATA 1238366 Query 155050 AAACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGT 155104 | || || ||||| ||||| || ||||| || || || || ||||| |||| Sbjct 1238365 AGACTTTTGCCATTCCTCATGGCGGAGGAGGACCGGGTGTTGGCCCTATTTGTGT 1238311 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579211771897280