Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016555.1_202016-02-08]
142 sequences; 9,351,707 total letters
Query= NC_020845.1
Length=180977
Score E
Sequences producing significant alignments: (Bits) Value
seq17 140 4e-28
>seq17
Length=1275604
Score = 140 bits (154), Expect = 4e-28
Identities = 164/222 (74%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 139859 CATTGCCTCTGCTGCTGCAGTTGCTTCATCTAATAGAGATGCGTTTGCTATTGGTAATCC 139918
|||||| ||||| ||||||| | ||||| || ||||| || || || | || | ||
Sbjct 1240020 CATTGCTTCTGCAGCTGCAGACGACTCATCCAAAAGAGAAGCATTGGCGACCGGGAGGCC 1240079
Query 139919 TGTAAGTTCTGTGATGAGCGTTTGGTAATTGAATAAAGCTTCCAATCTTCCCTGAGATAT 139978
||| || || |||||| |||||| |||||| |||| |||||||| ||||||| ||
Sbjct 1240080 TGTCAGATCACTGATGACAGTTTGGAAATTGAGTAAACTTTCCAATCGTCCCTGACTTAC 1240139
Query 139979 CTCAGCTTGATAGGGAGTGTAAGATGTGTACCAACTAGGATTCTCAAGAACGTTTCGCTG 140038
|| | ||||| || ||||||||||||||||| | |||||||| || | || || |
Sbjct 1240140 TTCGGGCTGATATGGGGTGTAAGATGTGTACCATCCTGGATTCTCGAGCAAATTACGAAG 1240199
Query 140039 TATGACTGGGGGTGTAATGGTTCCATAGTATCCTTGACCTAT 140080
|| || || || ||||||| ||||| |||||| ||| ||
Sbjct 1240200 AATCACAGGAGGGATAATGGTGCCATAAAATCCTTTACCAAT 1240241
Score = 123 bits (136), Expect = 3e-23
Identities = 131/173 (76%), Gaps = 0/173 (0%)
Strand=Plus/Plus
Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242
|||| |||||| || || || || ||||| || ||||| ||||| || |||||||||
Sbjct 1238311 ACACAAATAGGGCCAACACCCGGTCCTCCTCCGCCATGAGGAATGGCAAAAGTCTTATGT 1238370
Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302
|||||||||||||||||||| || || ||| | ||| || || || || || |||
Sbjct 1238371 AAATTTAGATGACATACATCAGCTCCCAGGTCTCCTGGGGATGTTAATCCCACTTGAGCA 1238430
Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTT 138355
|| | || |||||||| | |||||| |||||||||| || ||| | ||| ||
Sbjct 1238431 TTCATGTTAGCACCATCTAAATATACTTGACCACCATGGTTATGGATGATATT 1238483
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578997372277840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |