Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016555.1_202016-02-08]
142 sequences; 9,351,707 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq30 246 4e-60
seq27 96.9 4e-15
>seq30
Length=271157
Score = 246 bits (272), Expect = 4e-60
Identities = 800/1229 (65%), Gaps = 29/1229 (2%)
Strand=Plus/Minus
Query 75219 ACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTCTTGGAGA 75278
|| || | ||||| || || |||||||| || || || ||||||| || | || |
Sbjct 89602 ACTTGATTATGCGTGTTGCTATCGGCATTCATGGTGATGACATTGCAAGAGTTATTGAAA 89543
Query 75279 CATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCT 75337
| || || ||| || | |||| |||| ||| || | || || || || || |||
Sbjct 89542 CTTATAACTTTATGAGTCAGAAGTAT-TTCACTCATGCCTCTCCTACTCTGTTTAACGCT 89484
Query 75338 GGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATC 75397
||||| || || || ||||| || ||| | | |||| ||| ||||||||
Sbjct 89483 GGTACCCCTCACCCACAAATGTCATCATGTTTCTTAGTTGCCATGCGGGATGACTCAATT 89424
Query 75398 AACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATT 75457
| || || || | ||| | | ||| ||||| |||||| || ||||| || |||
Sbjct 89423 GAAGGCATTTACGATACTTTGAAGGAATGTGCTTTAATCTCCAAAACTGCTGGTGGAATT 89364
Query 75458 GGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAA 75517
|| ||||||| ||| || | | |||| ||| ||| || || || |||
Sbjct 89363 GGTTTGCACATTCATAATATTCGTGCCACAGGATCCTACATTGCTGGTACTAACGGTACT 89304
Query 75518 TCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAA 75577
|| ||||||||||||||||| | | || || ||| ||| || || ||||| | |||
Sbjct 89303 TCGAATGGTATTATTCCAATGGTGAGGGTCTTCAACAACACTGCTCGTTATGTTGACCAA 89244
Query 75578 GCGGGGCGTCGCAAGG---GGTCCATC-GCGGTCTACTTGGAACCATGGCATGCCGATAT 75633
| | || | | | ||| ||| || | |||||||| |||||||||||||| ||
Sbjct 89243 G-GTGGTAACAAACGTCCTGGTGCATTTGCTTTGTACTTGGAGCCATGGCATGCCGACAT 89185
Query 75634 CATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTG-TAGAGATC 75692
| | | ||| |||| | || ||||| ||| | || ||| || | | ||||||
Sbjct 89184 CTTTGCCTTCATTGATATTCGTAAGAACCATGGTAAAGAGGAGA-TCAGAGCTAGAGACT 89126
Query 75693 TCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTGGTCAAT 75752
| || | | ||||||| || || || |||||||| | || || || ||| | |
Sbjct 89125 TATTCCCCGCTTTGTGGATCCCTGATCTGTTCATGAAAAGAGTAGAACAGAATGGCGATT 89066
Query 75753 GGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGAGGAGTTTG 75812
|| | || |||| |||| | || || || || |||||| || || || ||||
Sbjct 89065 GGACCCTGTTCTCTCCAAGTGAAGCTCCTGGCCTTGCCGACGTCTATGGAGATGAATTTG 89006
Query 75813 AAGCCCTCTACACAAAGTATGAAGAGGAGGGTAG----AGCCAATGCGACTGTACCAGCC 75868
| | | ||| || || ||| |||| ||| | || ||| || | ||||
Sbjct 89005 AGGAATTGTACGAAAGATACGAAAAGGAAGGTCGTGGAAGACAA----ACCATCAAAGCC 88950
Query 75869 GCCGATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTT 75928
| ||||| | || || || | |||| || || ||||| || |||| |||||
Sbjct 88949 CAAAAGCTTTGGTACGCCATCCTTGAGGCACAAACAGAAACTGGTACTCCATTCATGCTG 88890
Query 75929 TACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCA 75988
|| ||||||||||||||||| || | |||||| ||||| ||||| || || |||
Sbjct 88889 TATAAGGATGCTTGTAACAAAAAAACTAACCAGAAGAACTTGGGTGTCATTAAATCCTCT 88830
Query 75989 AATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTG 76048
|| |||||| |||||| | || ||| | ||| ||||| ||||| || || |||
Sbjct 88829 AACCTTTGCTGTGAAATTGTTGAATACTCTTCCCCGGAAGAGACTGCTGTCTGTAACTTG 88770
Query 76049 GCATCAATCGCCCTTCCAAAGTATGTCAAT---GAAGAGACTCGCACTTTTGAT-----T 76100
|| || || || |||||| | ||| | || || |||| ||| || | |
Sbjct 88769 GCTTCTATTGCTCTTCCAGCCTTTGTTGAAACCGATGATACTC--ACTGCTGGTACAACT 88712
Query 76101 ATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACA 76160
|||||| || ||||||||||| || | ||||| || | ||| || | || ||||
Sbjct 88711 TTGAAAAGCTGCATGAAATCACCAAAGTGGTTACTCGTAACTTGAACAGAATTATCGACA 88652
Query 76161 GAAATTTTTATCCCGTT-GAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGT 76219
|||||||||| |||||| ||| || | | || |||||||| | |||||||| | |
Sbjct 88651 GAAATTTTTACCCCGTTCCAGA-AGCTAGGAGATCGAATATGCGTAATAGACCTATAGCT 88593
Query 76220 TTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGATTCAGAT 76279
|||||||||||||| | || |||| ||||| || | | ||||||||
Sbjct 88592 GTGGGTGTTCAAGGTTTAGCTGATGCTTTTATGAAGTTGAGAATTCCTTTTGATTCTCCA 88533
Query 76280 GAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCG 76339
|||||||| || | ||| || || |||||||| || || || ||| | |||| ||
Sbjct 88532 GAAGCCAAACAGCTTAATATTCAGATTTTTGAAACTATCTACCATGCAGCTTTGGAAGCC 88473
Query 76340 AGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCC 76399
||||| || | | |||| |||| || || || | |||||||| || ||
Sbjct 88472 TCCAACGAATTAGCCGTCGAAGAAGGAGCCTACGAAACCTTCCAAGGTTCTCCAGCATCT 88413
Query 76400 CAAGGGGTGCTTCAGTTTGATATGTGGGA 76428
|| || | | || | ||| |||||||
Sbjct 88412 CAGGGCATTTTGCAATATGACTTGTGGGA 88384
>seq27
Length=164711
Score = 96.9 bits (106), Expect = 4e-15
Identities = 167/238 (70%), Gaps = 10/238 (4%)
Strand=Plus/Minus
Query 64996 GCCATCCAAACTGTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTT--- 65052
|||||| | || | |||||||| | | ||||| | ||||| |||| |||| ||
Sbjct 106517 GCCATCGAGACCATTCCATGTATCAAAGAAAAGGCTGACTGGGCCATGAGATGGATTTCT 106458
Query 65053 GAC-ACAAAGTCTCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTAT 65111
|| || | | | | ||||| || || | |||| || || ||| ||||||||
Sbjct 106457 GATGACGATGCATTG----TTCGCTGAACGTTTGGTTGCCTTCGCTGCTGTTGAGGGTAT 106402
Query 65112 CTTCTTCTCCGGGTCATTCTGCG-CTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAG 65170
|||||| || || || || ||| |||| | |||||||||||| | |||||||||||||
Sbjct 106401 CTTCTTTTCAGGATCTTT-TGCTTCTATCTTCTGGTTGAAGAAGAGAGGTCTCATGCCAG 106343
Query 65171 GCCTATGCTTCTCAAATGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGC 65228
| | |||||| ||||| ||||||| | |||| ||||| | ||| || |||||
Sbjct 106342 GTTTGACCTTCTCCAATGAGCTTATTTGCAGAGACGAGGGATTACACACTGACTTTGC 106285
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596568541088960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |