Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016555.1_202016-02-08]
142 sequences; 9,351,707 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq30 208 9e-49
seq27 104 3e-17
>seq30
Length=271157
Score = 208 bits (230), Expect = 9e-49
Identities = 789/1225 (64%), Gaps = 21/1225 (2%)
Strand=Plus/Minus
Query 104229 ACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTCTTGGAGA 104288
|| || | ||||| || || ||||| |||||||| || ||||||| || | || |
Sbjct 89602 ACTTGATTATGCGTGTTGCTATCGGCATTCATGGTGATGACATTGCAAGAGTTATTGAAA 89543
Query 104289 CATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCT 104347
| || || ||| || | |||| |||| ||| || | || || || || || |||
Sbjct 89542 CTTATAACTTTATGAGTCAGAAGTAT-TTCACTCATGCCTCTCCTACTCTGTTTAACGCT 89484
Query 104348 GGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATC 104407
||||| || || |||||||| || ||| | | |||| ||| ||||||||
Sbjct 89483 GGTACCCCTCACCCACAAATGTCATCATGTTTCTTAGTTGCCATGCGGGATGACTCAATT 89424
Query 104408 AACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATT 104467
| || || || | ||| | | ||| ||||| |||||| || ||||| || |||
Sbjct 89423 GAAGGCATTTACGATACTTTGAAGGAATGTGCTTTAATCTCCAAAACTGCTGGTGGAATT 89364
Query 104468 GGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAA 104527
|| ||||||| ||| || | | |||| ||| ||| || || || |||
Sbjct 89363 GGTTTGCACATTCATAATATTCGTGCCACAGGATCCTACATTGCTGGTACTAACGGTACT 89304
Query 104528 TCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAA 104587
|| ||||||||||||||||| | | || || ||| ||| || || ||||| | |||
Sbjct 89303 TCGAATGGTATTATTCCAATGGTGAGGGTCTTCAACAACACTGCTCGTTATGTTGACCAA 89244
Query 104588 GCTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATAT 104643
| | || | || | || | | || | || | ||||||||||| || || ||
Sbjct 89243 GGT-GGTAACAAACGTCCTGGTGCATTTGCTTTGTACTTGGAGCCATGGCATGCCGACAT 89185
Query 104644 CATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGC-CGCGATC 104702
| | | ||| |||| | ||| ||||| ||| | ||||| | | | || | ||
Sbjct 89184 CTTTGCCTTCATTGATATTCGTAAGAACCATGGTAAAGAGGA-GATCAGAGCTAGAGACT 89126
Query 104703 TCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATT 104762
| ||| ||||| | ||||| || ||||| |||||||| ||||| || ||| |||| |||
Sbjct 89125 TATTCCCCGCTTTGTGGATCCCTGATCTGTTCATGAAAAGAGTAGAACAGAATGGCGATT 89066
Query 104763 GGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGAGGAGTTTG 104822
|| | || || | |||| | || ||||| || |||| | | || || || ||||
Sbjct 89065 GGACCCTGTTCTCTCCAAGTGAAGCTCCTGGCCTTGCCGACGTCTATGGAGATGAATTTG 89006
Query 104823 AAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTGCCAGCTGCCG 104882
| | | ||| || ||||| | |||||||| | | || | |||
Sbjct 89005 AGGAATTGTACGAAAGATACGAAAAGGAAGGTCGTGGAAGACAAACCATCAAAGCCCAAA 88946
Query 104883 ATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTACA 104942
| | ||| | || || || || | ||||| || |||||||| |||| |||||| || |
Sbjct 88945 AGCTTTGGTACGCCATCCTTGAGGCACAAACAGAAACTGGTACTCCATTCATGCTGTATA 88886
Query 104943 AAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATC 105002
| || || |||||| |||| | ||| || ||||| |||||||| || || || || |
Sbjct 88885 AGGATGCTTGTAACAAAAAAACTAACCAGAAGAACTTGGGTGTCATTAAATCCTCTAACC 88826
Query 105003 TCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCAT 105062
| || ||||| | |||| | | || ||||| ||||| |||||| | || |
Sbjct 88825 TTTGCTGTGAAATTGTTGAATACTCTTCCCCGGAAGAGACTGCTGTCTGTAACTTGGCTT 88766
Query 105063 CAATCGCTCTCCCCAAGTATGTGGATCCAGA-GACAAAGACATTTG-----ATTATGAAA 105116
| || ||||| || | ||| || | || || | || || | | |||||
Sbjct 88765 CTATTGCTCTTCCAGCCTTTGTTGAAACCGATGATACTCACTGCTGGTACAACTTTGAAA 88706
Query 105117 AACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAGAAATT 105176
| || || ||| | || ||| || || ||| | |||||| |||| || |||||||
Sbjct 88705 AGCTGCATGAAATCACCAAAGTGGTTACTCGTAACTTGAACAGAATTATCGACAGAAATT 88646
Query 105177 TTTACCCCGTT-GAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGT 105235
||||||||||| ||| ||| | | ||| |||||| | | | || || | | | |||
Sbjct 88645 TTTACCCCGTTCCAGA-AGCTAGGAGATCGAATATGCGTAATAGACCTATAGCTGTGGGT 88587
Query 105236 GTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGACGAAGCG 105295
||||| ||| | || |||| || || | | | |||||||| |||||
Sbjct 88586 GTTCAAGGTTTAGCTGATGCTTTTATGAAGTTGAGAATTCCTTTTGATTCTCCAGAAGCC 88527
Query 105296 AAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAGGCGAGTTCA 105355
|| | | ||| | || ||||| || || || || || ||| | || || | ||
Sbjct 88526 AAACAGCTTAATATTCAGATTTTTGAAACTATCTACCATGCAGCTTTGGAAGC--CTCCA 88469
Query 105356 --GAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAG 105413
|| || || | | || || | || |||||||| | ||||||||||| || || |
Sbjct 88468 ACGAATTAGCCGTCGAAGAAGGAGCCTACGAAACCTTCCAAGGTTCTCCAGCATCTCAGG 88409
Query 105414 GGGTGCTTCAATTTGATATGTGGGA 105438
| | | |||| ||| |||||||
Sbjct 88408 GCATTTTGCAATATGACTTGTGGGA 88384
>seq27
Length=164711
Score = 104 bits (114), Expect = 3e-17
Identities = 167/235 (71%), Gaps = 4/235 (2%)
Strand=Plus/Minus
Query 94723 GCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT 94782
|||||| | || |||| ||||| || | || || || ||||| |||| ||| || |
Sbjct 106517 GCCATCGAGACCATTCCATGTATCAAAGAAAAGGCTGACTGGGCCATGAGATGGATTTCT 106458
Query 94783 -ACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTT 94841
| | | || || || ||||| || | | || || || |||||||||||||||
Sbjct 106457 GATGACGATGCATTG-TTCGCTGAACGTTTGGTTGCCTTCGCTGCTGTTGAGGGTATCTT 106399
Query 94842 CTTCTCTGGTTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTC 94900
||| || || || || ||| |||| | ||| | |||||| |||||||||||||||||
Sbjct 106398 CTTTTCAGGATCTTT-TGCTTCTATCTTCTGGTTGAAGAAGAGAGGTCTCATGCCAGGTT 106340
Query 94901 TCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955
| ||||||||| |||||||| | | ||||||||| | ||| || |||||
Sbjct 106339 TGACCTTCTCCAATGAGCTTATTTGCAGAGACGAGGGATTACACACTGACTTTGC 106285
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583259764712080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |