Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016565.1_202016-02-08]
142 sequences; 9,352,642 total letters
Query= NC_003494.1
Length=111362
Score E
Sequences producing significant alignments: (Bits) Value
seq30 109 4e-19
>seq30
Length=426252
Score = 109 bits (120), Expect = 4e-19
Identities = 276/417 (66%), Gaps = 12/417 (3%)
Strand=Plus/Minus
Query 22750 GCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGCTG 22809
||||| || |||||||| || || | ||||| || || ||||| | || |||||| ||
Sbjct 106526 GCCTTCGCTGCTGTTGAGGGTATCTTCTTTTCAGGATCTTTTGCTTCTATCTTCTGGTTG 106467
Query 22810 AAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACGAA 22869
||||| | ||||||||||| ||| | || ||||| ||| | ||| || | |||||
Sbjct 106466 AAGAAGAGAGGTCTCATGCCAGGTTTGACCTTCTCCAATGAGCTTATTTGCAGAGACGAG 106407
Query 22870 GGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCAAATGGCAAACAA---ACCGTGT 22926
|| ||||| |||||||||||| |||| ||| || | |||||| | | ||
Sbjct 106406 GGATTACACACTGACTTTGCTTGCTTGCTATTTTCTCATTT---AAACAATAGAGCCAGT 106350
Query 22927 CAGGA---CGATGCACATCAAATCATATCTGATGCCGTTGACATTGAGACGGCTTTCTTC 22983
|||| || || | | || || | || || || || || || | | ||||
Sbjct 106349 GAGGAAATCGTTG---AAAAGATTATCACAGAGGCTGTCGAGATCGAAAAAAGGTACTTC 106293
Query 22984 CAAGAGGCACTAAAGACACCCCTACTTGGTATGAATAGTGACAGTATGAGACTGTACATA 23043
||| || || || |||| || ||||| | | ||| | | ||| |
Sbjct 106292 ACAGACGCTCTTCCTGTCTCCTTACTGGGGATGAACTGCAGCTTGATGTGCCAGTATGTT 106233
Query 23044 CAGTTTGTTGCAGATCGCCTGCTCGATGCCCTGGGTTATGCAAAGATGTATAACGTTGCC 23103
|||| ||||| || | || || | || ||||| | |||| |||| ||||| |
Sbjct 106232 GAGTTCGTTGCTGACAGACTACTGGTAGCTCTGGGCAACAAAAAGGTGTACAACGTCAAC 106173
Query 23104 AATCCATTTGATTTCATGGATAACATTAGCATTGAAGGTAAAACAAACTTCTTTGAA 23160
||||||||||| |||||||| |||||| | | |||||||| |||||||| |||
Sbjct 106172 AATCCATTTGACTTCATGGAGAACATTTCTTTGGCCGGTAAAACCAACTTCTTCGAA 106116
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 356232983493226
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |