Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016565.1_202016-02-08] 142 sequences; 9,352,642 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq28 95.1 2e-14 >seq28 Length=152061 Score = 95.1 bits (104), Expect = 2e-14 Identities = 135/188 (72%), Gaps = 3/188 (2%) Strand=Plus/Plus Query 279702 TCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGTGCC 279761 || ||||| ||||||||||||||||||||||| | || | ||| |||| ||| Sbjct 47992 TCCCTGTCTGGTGGTTGGAAGATGAAGCTGGCTTTGGCTAGAGCCGTTCTTAGAAATGCT 48051 Query 279762 GATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGGCTA 279821 || | || |||| ||||| ||||| ||||| ||||||| |||||| || ||| | Sbjct 48052 GACATTCTGTTGCTAGATGAACCAACTAACCATTTGGACACTGTCAACGTTGCTTGGTTG 48111 Query 279822 GTGTCCTACCTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCACGACTCTGGC 279881 || |||| | | | | || ||| || | ||| |||||||||| || |||||||| Sbjct 48112 GTCAACTACTTGAATACT-TGTGGAA--TTACATCCATCATTGTCTCCCATGACTCTGGT 48168 Query 279882 TTCCTAGA 279889 ||||| || Sbjct 48169 TTCCTGGA 48176 Score = 86.0 bits (94), Expect = 1e-11 Identities = 119/167 (71%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 280672 CCAAGCTGGGTCTGGACCCCGAGTTTACAACTCACTCTCGCATTCGCGGTCTTTCTGGAG 280731 ||| | |||||||||| | ||||| ||||||| || || | ||||| ||||| | Sbjct 49004 CCATGTTGGGTCTGGATGCTGAGTTGGTTTCTCACTCCCGTATCAGAGGTCTGTCTGGTG 49063 Query 280732 GCCAGAAGGTCAAACTTGTCATCGGAGCAGCTCTGTGGCAACACCCTCACGTGATCGTTC 280791 | || |||||||| | ||| | | || | |||||| || ||| ||||||| Sbjct 49064 GTCAAAAGGTCAAGTTGGTCTTGGCTGCTTGTACCTGGCAAAGACCCCACCTGATCGTCT 49123 Query 280792 TCGACGAGCCTACCAACTATCTGGACCGCGAGAGCCTGGGCGCTCTG 280838 | |||||||||||||||||| ||||| | || |||||| ||| || Sbjct 49124 TGGACGAGCCTACCAACTATTTGGACAGAGACTCCCTGGGAGCTTTG 49170 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027834929979422