Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016565.1_202016-02-08] 142 sequences; 9,352,642 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq8 107 5e-18 seq34 84.2 5e-11 seq20 84.2 5e-11 >seq8 Length=658275 Score = 107 bits (118), Expect = 5e-18 Identities = 161/228 (71%), Gaps = 3/228 (1%) Strand=Plus/Minus Query 206158 AAGGCTAAAATGTACCAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAA 206217 ||| | |||||| ||||| || ||| || | || || || || || || |||||| Sbjct 572398 AAGACAAAAATG---CAGATTTTCGTCAAGACCTTAACCGGTAAGACTATTACCTTGGAA 572342 Query 206218 GTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATT 206277 || || || ||||| |||| || ||| ||||||||||| || ||||||||| Sbjct 572341 GTCGAGTCCTCCGACACCATCGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGAATT 572282 Query 206278 TTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTG 206337 || ||| ||| | | || || || || ||||| ||||||| || || ||| || Sbjct 572281 CCTCCTGACCAACAACGTTTGATTTTTGCTGGTAAGCAACTGGAAGACGGTAGAACTCTG 572222 Query 206338 GCCGATTACAACGTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385 | || |||||| ||||||| ||||||||| | ||||| ||| ||||| Sbjct 572221 TCTGACTACAACATCCAGAAGGAGTCTACTTTGCACCTGGTTCTGAGA 572174 >seq34 Length=271129 Score = 84.2 bits (92), Expect = 5e-11 Identities = 155/225 (69%), Gaps = 2/225 (1%) Strand=Plus/Minus Query 173107 GCGTCCTTGTAGACGATGAAGGGCATACCAACCTCCGCTTGAGCCACCAAAATGTGGTGC 173166 || ||||| || | ||||| || ||||| || | ||| ||| | | ||| || | Sbjct 182279 GCATCCTTATACAGCATGAATGGAGTACCAGTTTCTGTTTGTGCCTCAAGGATGGCGTAC 182220 Query 173167 CAAAGTTCTTGGGCTTTTACGGTAGTTCTCGCTCTTCCTTCTTTTTCGTATCTCTCATAG 173226 ||||| | ||||||||| | ||| ||| | | ||||| ||||||||||| || || Sbjct 182219 CAAAGCTTTTGGGCTTTGATGGTTTGTCTTCCACGACCTTCCTTTTCGTATCTTTCGTAC 182160 Query 173227 AGGTCTTCGAAATCCTTCCCGTAAATTTCGTCAAGACCGGGAGCTTCCTTCGGACAAAAG 173286 | || || || || | || || | ||| |||| || |||||||| | ||| | || Sbjct 182159 AATTCCTCAAATTCATCTCCATAGACGTCGGCAAGGCCAGGAGCTTCACTTGGAGAGAAC 182100 Query 173287 AGACTCCAATTTCCA-TCGGTCTCGACCCTCTTCATGAAGAGGTC 173330 || |||||| ||| || || || || || |||||||| || || Sbjct 182099 AGGGTCCAATCGCCATTCTGT-TCTACTCTTTTCATGAACAGATC 182056 >seq20 Length=97383 Score = 84.2 bits (92), Expect = 5e-11 Identities = 152/222 (68%), Gaps = 3/222 (1%) Strand=Plus/Minus Query 206164 AAAATGTACCAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAA 206223 |||||| ||||| ||| ||||| || ||||| || || |||||| | || ||||| Sbjct 311 AAAATG---CAGATTTTTGTTAAAACCCTAACAGGTAAGACTATCACTCTTGAGGTGGAG 255 Query 206224 AGTTCTGACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCG 206283 || ||||| | || || || ||||||||||| || ||||| ||| || Sbjct 254 TCATCAGACACTATTGATAATGTCAAATCCAAGATTCAAGATAAGGAAGGTATTCCTCCT 195 Query 206284 GACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGAT 206343 ||| ||| | | || || || || ||||| ||||||| || || ||| | | ||| Sbjct 194 GACCAGCAACGTTTAATTTTTGCTGGTAAGCAACTGGAAGACGGTAGAACTCTTTCTGAT 135 Query 206344 TACAACGTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385 |||||| |||| || || || || || ||| | ||| | ||| Sbjct 134 TACAACATCCAAAAGGAATCCACCCTCCACTTGGTTCTAAGA 93 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181818649824782