Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016565.1_202016-02-08]
142 sequences; 9,352,642 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq30 259 4e-64
>seq30
Length=426252
Score = 259 bits (286), Expect = 4e-64
Identities = 584/869 (67%), Gaps = 23/869 (3%)
Strand=Plus/Plus
Query 4257 TTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTT 4316
|||||||| || || |||| |||||||||||| || ||||| || | || ||||| ||
Sbjct 106093 TTTTGGTAATCAGAAACTCTCTTTTCGAAGAAGTTGGTTTTACCGGCCAAAGAAATGTTC 106152
Query 4317 TCCATAAAATCAAACGGATTAGTTG-CGTTGTA-ATGTTTTTCACACTTTAGAGCTACAA 4374
||||| || ||||| ||||| |||| ||||||| | ||||| | |||||||| |
Sbjct 106153 TCCATGAAGTCAAATGGATT-GTTGACGTTGTACACCTTTTTGTTGC-CCAGAGCTACCA 106210
Query 4375 GCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTA 4434
| | || |||||| || || || | |||||||| ||| | |||||| || || | ||
Sbjct 106211 GTAGTCTGTCAGCAACGAACTCAACATACTGGCACATCAAGCTGCAGTTCATCCCCAGTA 106270
Query 4435 ATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTA 4494
| ||||| || |||| ||| || || || ||| || || || |||||||| |
Sbjct 106271 AGGAGACAGGAAGAGCGTCTGTGAAGTACCTTTTTTCGATCTCGACAGCCTCTGTGATAA 106330
Query 4495 TATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACGCAA 4554
| | || | | || | | | | |||| ||| | ||| | || || ||||
Sbjct 106331 TCTTTTCAACGATTTCCTCACTGGCTCTATTGTTTAAATGAGAAAATAGCAAGCAAGCAA 106390
Query 4555 AATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCA 4614
| ||| || || || |||||||||| ||| || || || || || || || || ||||
Sbjct 106391 AGTCAGTGTGTAATCCCTCGTCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCTGGCA 106450
Query 4615 TTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTT 4674
| | ||||||||| || | ||| || |||| ||||| || || |||||||| || || |
Sbjct 106451 TGAGACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAAGATCCTGAAAAGAAGATACCCT 106510
Query 4675 CTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCTT---TAATCC 4731
| || || || || || || || || ||||| | || | ||| | |||||
Sbjct 106511 CAACAGCAGCGAAGGCAACCAAACGTTCAGCGAACAA---TGCATCGTCATCAGAAATCC 106567
Query 4732 ATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAA-- 4789
|| | | ||||||| ||| |||| || | || ||||| || | || || || ||
Sbjct 106568 ATCTCATGGCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTCGATGGCATTGAACA 106627
Query 4790 -TAATT--TACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACAT 4846
|||| ||| ||| ||| |||| || ||||| || || || | | || |
Sbjct 106628 GGAATTCAGACTCTTT-----TGGATCTTTGATGTAAGTATCAATCAGCAAGGAGTAAGT 106682
Query 4847 TTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTAC 4906
|| || || || || || || ||||| || |||||||||||| | ||||| | |
Sbjct 106683 CTCGGAGTGAATGTTCTCCATCATGATCTGGAAACCGTAAAAGCATTTTGCTTCGGGAAG 106742
Query 4907 TTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGC 4966
|||||| || || || |||| || |||||||| || || ||||||||| ||| ||
Sbjct 106743 TTGAACCTCAGCACTGAAATTTTCCACCAAGTTTTCATTGACAATACCGTCAGAGGCAGC 106802
Query 4967 AAAAAACGCCAAAACATGAGATATAAAGTACTGTTC---GTCAGGCTTAAGTTTTTTCCA 5023
||| || || | || || || ||| | | ||| || | || | || |||||
Sbjct 106803 AAAGAAGGCAAGGACTCTCGAGATGAAGAATTTTTCATTATCGTTCATACGATTATTCCA 106862
Query 5024 GTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTT 5083
|| ||||||| ||| | || | ||| ||| |||||||||| || ||||| || |
Sbjct 106863 GTCATGCAAATCCTTACCCAGGTCTATTTCCTCAGCAGTCCAAAAGGAAGCTTCGGCCTG 106922
Query 5084 TTTGTACATAGACCAAATATCAGGATACT 5112
|||||||| ||| ||||| | ||||
Sbjct 106923 CTTGTACATTTGCCAGATATCGTGGTACT 106951
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427048860937286
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |