Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016575.1_202016-02-08] 165 sequences; 9,355,305 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq31 201 1e-46 >seq31 Length=329313 Score = 201 bits (222), Expect = 1e-46 Identities = 475/708 (67%), Gaps = 16/708 (2%) Strand=Plus/Plus Query 16674 TTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCT 16733 |||||||||| ||| | |||||||| ||||| ||||| || | | ||| || |||| Sbjct 9110 TTTGGTAATCAGAAACTCTCTTTTCGAAGAAGTTGGTTTTACCGGCCAAAGAAATGTTCT 9169 Query 16734 CCATGAAATCAAAAGGATTAGTAGC--TGAAAATATTTTAGAGTACCCCAGTTCGGCGAT 16791 ||||||| ||||| ||||| | | || | | |||| | | ||||| | | | Sbjct 9170 CCATGAAGTCAAATGGATTGTTGACGTTGTACACCTTTTTG--TTGCCCAGAGCTACCAG 9227 Query 16792 TAATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTA-TAA 16850 || ||| || || || || || | ||| |||||||| || ||||||||| || | ||| Sbjct 9228 TAGTCTGTCAGCAACGAACTCAACATACTGGCACATCAAGCTGCAGTTCATCCCCAGTAA 9287 Query 16851 GACGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAA 16910 | | || |||||||| || || || | | || || || | || || || | |||| Sbjct 9288 GGAG-ACAGGAAGAGCGTCTGTGAAGTACCTTTTTTCGATCTCGACAGCCTCTGTGATAA 9346 Query 16911 TACTAGCAACTCGTTCCTCGGACGGTGTAT-GTTTAAGATGTTTAAACATCAGACATGCG 16969 | | |||| |||||| | | ||| |||||| ||| ||| | || || || Sbjct 9347 TCTTTTCAACGATTTCCTCACTGGCTCTATTGTTTAA-ATGAGAAAATAGCAAGCAAGCA 9405 Query 16970 AAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGC 17029 || || ||||||||||||||||||| ||||| || || || || ||||| || ||| Sbjct 9406 AAGTCAGTGTGTAATCCCTCGTCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCTGGC 9465 Query 17030 ATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCC 17089 || |||| ||||| ||||| || || | || || || || |||||||| |||||| Sbjct 9466 ATGAGACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAAGATCCTGAAAAGAAGATACCC 9525 Query 17090 TCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCAT 17149 || || | || || || | || ||||| ||| || || || | | | ||||||| Sbjct 9526 TCAACAGCAGCGAAGGCAACCAAACGTTCAGCGAACAATGCATCGTCATCAGAAATCCAT 9585 Query 17150 TTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATA-- 17207 || |||| || || |||| || || || || || || ||||| || || | Sbjct 9586 CTCATGGCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTCGATGGCATTGAACAGG 9645 Query 17208 ATTTC--TCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTC 17265 | ||| || ||| | | || | || || ||||| || || | | ||| | || Sbjct 9646 AATTCAGACTCTTT----TGGATCTTTGATGTAAGTATCAATCAGCAAGGAGTAAGTCTC 9701 Query 17266 GGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTG 17325 |||||| ||||||||||| ||||| || |||||||||||| ||||| | | ||| Sbjct 9702 GGAGTGAATGTTCTCCATCATGATCTGGAAACCGTAAAAGCATTTTGCTTCGGGAAGTTG 9761 Query 17326 AACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTC 17373 ||| || | ||| |||| | | ||||| || || || ||||| Sbjct 9762 AACCTCAGCACTGAAATTTTCCACCAAGTTTTCATTGACAATACCGTC 9809 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517544532562200