Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016575.1_202016-02-08]
165 sequences; 9,355,305 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq4 107 2e-18
seq23 89.7 6e-13
seq22 87.8 2e-12
>seq4
Length=372207
Score = 107 bits (118), Expect = 2e-18
Identities = 166/232 (72%), Gaps = 4/232 (2%)
Strand=Plus/Plus
Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016
|| ||||| || | | ||||| ||||| || ||||||||| || ||||| |||| |
Sbjct 292956 CCACCTCTCAATCTAAGGACCAAGTGCAAAGTAGACTCCTTTTGGATGTTGTAGTCAGAC 293015
Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076
| ||| | | || || | ||||||||||| || || || ||||| ||||| | ||
Sbjct 293016 AAAGTTCTACCATCCTCCAATTGCTTACCAGCAAAGATCAGACGCTGTTGGTCAGGAGGA 293075
Query 43077 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCG-CCACCGTGTCGCTCGATTCCA 43134
| | |||||||||| ||| | || | |||| ||| | | | |||||| || ||||
Sbjct 293076 ATTCCCTCCTTGTCC-TGAATCTTGGACTTGA-CGTTGTCAATAGTGTCGGAAGACTCCA 293133
Query 43135 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 43186
| || | ||||| || || || || || |||||||| || |||||||||||
Sbjct 293134 CCTCCAAGGTGATAGTCTTACCGGTAAGGGTCTTTACGAAAATTTGCATTTT 293185
>seq23
Length=213739
Score = 89.7 bits (98), Expect = 6e-13
Identities = 149/213 (70%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 42972 AACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCA 43031
|| ||||| || | ||| |||||||||||||||||||||| ||||| | ||||
Sbjct 324 AATACCAAGTGAAGAGTGGATTCCTTTTGAATATTGTAATCAGAAAGAGTTCTACCGTCT 265
Query 43032 TCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCC 43091
|| || |||||||||||||| || | || |||||||| | || | | ||||||| |
Sbjct 264 TCCAGTTGCTTACCAGCGAAGATCAAACGTTGCTGGTCAGGAGGAATACCTTCCTTGT-C 206
Query 43092 ATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGT 43150
||| | || | ||||| | | | || || || || || || | ||||| ||
Sbjct 205 TTGAATCTTAGATTTGACGTTATCAATAGTATCTGATGACTCTACCTCAAGAGTGATAGT 146
Query 43151 TTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|| || ||||| ||||| || || || |||||
Sbjct 145 CTTACCAGTTAGAGTCTTGACGAAAATCTGCAT 113
>seq22
Length=162238
Score = 87.8 bits (96), Expect = 2e-12
Identities = 160/232 (69%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016
|| || ||||| | | ||||| || | ||| |||||||| || ||||||||||
Sbjct 162157 CCACCCCTTAATCTTAGAACCAAGTGGAGGGTGGATTCCTTTTGGATGTTGTAATCAGAA 162098
Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076
||||| | |||| || || ||||||||||| || || | || |||||||| | ||
Sbjct 162097 AGAGTTCTACCGTCTTCCAGTTGCTTACCAGCAAAAATTAAACGTTGCTGGTCAGGAGGA 162038
Query 43077 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 43135
| | ||||| | | ||| | || | ||||| | | | ||||| || |||||
Sbjct 162037 ATACCTTCCTTAT-CTTGAATCTTGGATTTGACATTATCAATAGTGTCTGATGACTCCAC 161979
Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTTT 43187
|| | ||||| || || || ||||| || || ||||| || |||||||||
Sbjct 161978 CTCAAGAGTGATAGTCTTACCTGTTAGGGTTTTAACAAAAATCTGCATTTTT 161927
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571816420626200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |