Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016575.1_202016-02-08] 165 sequences; 9,355,305 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq33 145 6e-30 >seq33 Length=584130 Score = 145 bits (160), Expect = 6e-30 Identities = 380/576 (66%), Gaps = 19/576 (3%) Strand=Plus/Minus Query 20218 GGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGAC 20277 || |||||||| || ||||| |||||||||||| | |||||||||||| | ||| ||| Sbjct 304556 GGCGATTTGGGGCCAGTGTACGGATTTCAATGGCGCCATTTTGGAGCTCAGTATAAAGAC 304497 Query 20278 ATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTTAATT 20337 || ||| | || ||||||||| | |||||| | | || ||| | || Sbjct 304496 TGTAAGACAGACTACACTGGACAAGGGTTTGATCAACTTTCTAGGGTAATTGAAACTCTT 304437 Query 20338 AAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTGCCT 20397 || || ||| | ||||||||||| || | | || |||||| || |||| | Sbjct 304436 CGTACCAATCCATATGACAGAAGAATAATCATGAGTGCATGGAACCCTCCAGATTTTGAG 304377 Query 20398 TTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTA---------AT 20448 ||||||| | || || |||||| | | || || ||||| ||| || || Sbjct 304376 AAAATGGCTCTCCCACCCTGTCATGTATTTTGTCACTTTTATGTTTCTTTCCCGAAAGAT 304317 Query 20449 AA------TGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTT 20502 || |||||| || ||| ||||||||| || ||| |||||||||| |||| ||| Sbjct 304316 AAAAAGCCTGAATTATCTTGTTTAATGTATCAGCGCTCCTGTGATATGGGATTGGGAGTT 304257 Query 20503 CCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTA 20562 |||||||| | || |||||||| |||| || | ||||| ||||| || ||| | Sbjct 304256 CCTTTCAACGTCGCCAGTTATGCCTTGCTGACCAAAATGATAGCACACGTAGTCGATATG 304197 Query 20563 AAAACGGGTGACTTAGTCCACACCATAGGAGACGCGCATATTTACCTTAATCATATAGA- 20621 | || ||||| | || ||||| || || || ||| | ||||| | ||| |||| Sbjct 304196 GACTGTGGGGACTTTATACATACCATGGGTGATGCACATGTGTACCTAGACCATGTAGAT 304137 Query 20622 ACCTTTAAAATTACAGTTAACACGACAACCAAAACAATTCCCAACTCTTCGCAT-TACTC 20680 || | ||| || | | | | || |||| | |||| || || | | || || | Sbjct 304136 GCCCTGAAAGTTCAGGCTGAAAGGATTCCCAAGA-AATTTCCCACGTTAAGAATCAACAC 304078 Query 20681 GAACTGTTAAAGATATTAACGATTTTAAAGCTGATGATTTTGTGTTAGAAGGTTATAATC 20740 |||| |||||||| | | ||| ||| ||| || ||| | |||| |||| ||| Sbjct 304077 GAAC-ACCAAAGATATCGATGGTTTCAAATTTGAGGACTTTCAGATAGATAATTATGATC 304019 Query 20741 CCCATAATTCAATTCCAATGGAAATGTCTGTTTAAT 20776 | ||| | || |||| ||||||| || |||| Sbjct 304018 CTCATCCACCCATCAAAATGAAAATGTCCGTGTAAT 303983 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399183197265925