Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016575.1_202016-02-08]
165 sequences; 9,355,305 total letters
Query= NC_003494.1
Length=111362
Score E
Sequences producing significant alignments: (Bits) Value
seq31 109 4e-19
>seq31
Length=329313
Score = 109 bits (120), Expect = 4e-19
Identities = 276/417 (66%), Gaps = 12/417 (3%)
Strand=Plus/Minus
Query 22750 GCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGCTG 22809
||||| || |||||||| || || | ||||| || || ||||| | || |||||| ||
Sbjct 9542 GCCTTCGCTGCTGTTGAGGGTATCTTCTTTTCAGGATCTTTTGCTTCTATCTTCTGGTTG 9483
Query 22810 AAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACGAA 22869
||||| | ||||||||||| ||| | || ||||| ||| | ||| || | |||||
Sbjct 9482 AAGAAGAGAGGTCTCATGCCAGGTTTGACCTTCTCCAATGAGCTTATTTGCAGAGACGAG 9423
Query 22870 GGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCAAATGGCAAACAA---ACCGTGT 22926
|| ||||| |||||||||||| |||| ||| || | |||||| | | ||
Sbjct 9422 GGATTACACACTGACTTTGCTTGCTTGCTATTTTCTCATTT---AAACAATAGAGCCAGT 9366
Query 22927 CAGGA---CGATGCACATCAAATCATATCTGATGCCGTTGACATTGAGACGGCTTTCTTC 22983
|||| || || | | || || | || || || || || || | | ||||
Sbjct 9365 GAGGAAATCGTTG---AAAAGATTATCACAGAGGCTGTCGAGATCGAAAAAAGGTACTTC 9309
Query 22984 CAAGAGGCACTAAAGACACCCCTACTTGGTATGAATAGTGACAGTATGAGACTGTACATA 23043
||| || || || |||| || ||||| | | ||| | | ||| |
Sbjct 9308 ACAGACGCTCTTCCTGTCTCCTTACTGGGGATGAACTGCAGCTTGATGTGCCAGTATGTT 9249
Query 23044 CAGTTTGTTGCAGATCGCCTGCTCGATGCCCTGGGTTATGCAAAGATGTATAACGTTGCC 23103
|||| ||||| || | || || | || ||||| | |||| |||| ||||| |
Sbjct 9248 GAGTTCGTTGCTGACAGACTACTGGTAGCTCTGGGCAACAAAAAGGTGTACAACGTCAAC 9189
Query 23104 AATCCATTTGATTTCATGGATAACATTAGCATTGAAGGTAAAACAAACTTCTTTGAA 23160
||||||||||| |||||||| |||||| | | |||||||| |||||||| |||
Sbjct 9188 AATCCATTTGACTTCATGGAGAACATTTCTTTGGCCGGTAAAACCAACTTCTTCGAA 9132
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 356232883636495
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |