Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016575.1_202016-02-08]
165 sequences; 9,355,305 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq36 405 7e-108
seq31 183 4e-41
>seq36
Length=393897
Score = 405 bits (448), Expect = 7e-108
Identities = 1376/2135 (64%), Gaps = 23/2135 (1%)
Strand=Plus/Plus
Query 78707 CCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTC 78766
||||||| | ||| || ||||||| ||| | || | || ||||| || |||||||| |
Sbjct 87809 CCTTGTCAACTGTAAACTGAATGGCAGCAGCGGCAGCTTGAGTACGCAGGTAGTACATAC 87868
Query 78767 CCGTTTTTAGACCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCG 78826
| || |||| || |||| || || || |||||||| || | ||| | | |
Sbjct 87869 CAGTCTTTAATCCTTTCTTCCAACCATAAAAGTGCATACTGGTCAATTTACCCATAGTTG 87928
Query 78827 GATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAG 78886
|| | | || || |||| || ||| ||||||||| ||||| || || ||||
Sbjct 87929 GAGCCATCAGGTGAATGTTCAACGACTGAGATTGATCGATATAGGCTGATCTATCGGCAG 87988
Query 78887 CCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATAT 78946
|||| | || || |||||||| | ||| ||||||| ||| || |||| | |||| |
Sbjct 87989 CCATATCAATAATAGTCTTTTGAGAAATCTCCCAAACAGTCTTGTAAAGGCCTTTAAGTT 88048
Query 78947 CTTCTGGAAGGTTTGT---ATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGA 79003
|| || | ||| | ||| ||||| || || |||| || || ||| || |
Sbjct 88049 GCTCAGGTATGTTGGGCAAATTTTGAATAGAGCCGTTGTCTGAAATGATATGATTTTTCA 88108
Query 79004 TCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTT 79063
| | || | ||| | || || | | | | | | |||||||| | ||
Sbjct 88109 TGTTATCGTCCCAAAGACCCAAATCCACTAGATCACGCAATAAGTAAGGATTAACAATTT 88168
Query 79064 GAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATT 79123
|||||||||||| ||||| | || | ||| || || || || ||||| | | |
Sbjct 88169 GAAATTCTCCAGCTAATACACGGCGTGAGTAGATGTTGGAAGTGTAAGGTTCGAAACACT 88228
Query 79124 CATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTAT 79183
| || | |||| |||||| | |||||| || || ||||||||||| || | || |
Sbjct 88229 CGTTGTAACCCAGAATTTGGGAAGTTGAAGCAGTGGGCATAGGTGCAACTAGCAACGAGT 88288
Query 79184 TTCTAAGACCGTATGATCTGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGACG 79243
|||| | ||| || || || |||| || |||||||| ||||| || ||||| |
Sbjct 88289 TTCTTAAACCTGTGGAAACAATCTTGGCTTTGAGTGATTCCCATTCCCACAGCTCAGAGG 88348
Query 79244 GGACAACATTCCAAAGATCATATTGTAGAATACCGTTACTAGCGTATGATCCTGTGTATG 79303
| | ||| | |||||||| | ||| || | | || || ||| | | |
Sbjct 88349 GCTTCTTGTCCCACAAGTCATATTGCAAAATGCCCTGAGATGCTGGAGAACCTTGGAAGG 88408
Query 79304 TTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAATAAA 79363
|||| || | |||||| | |||||||||| || || || ||| | | || |
Sbjct 88409 TTTCGTAGGCTCCTTCTTCGACGGCTAATTCGTTGGAGGCTTCCAAAGCTGCATGGTAGA 88468
Query 79364 TGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAATTTA 79423
| ||||| ||||||| |||| || | || |||||| | |||||| ||| | |
Sbjct 88469 TAGTTTCAAAAATCTGAATATTAAGCTGTTTGGCTTCTGGAGAATCAAAAGGAATTCTCA 88528
Query 79424 AGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTAT 79483
| ||||| || || ||||| ||||||||||| | | | |||||||||| | | |||
Sbjct 88529 ACTTCATAAAAGCATCAGCTAAACCTTGAACACCCACAGCTATAGGTCTATTACGCATAT 88588
Query 79484 TAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTCC 79543
| || | ||||||||||| || ||| |||| | || |||||| | || | || |
Sbjct 88589 TCGATCTCCTAGCTTCTGGAACGGGGTAAAAATTTCTGTCGATAATTCTGTTCAAGTTAC 88648
Query 79544 TGACTATT-ACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCGTC---------CA 79593
|| || |||||| | || | || || ||| | | | | ||
Sbjct 88649 -GAGTAACCACTTTGGTGATTTCATGCAGCTTTTCAAAGTTGTACCAGCAGTGAGTATCA 88707
Query 79594 TCTATTACAAACATG--TTCAAC-GCGACAGATGCCAGATTACAAACGGCTACCTCATTA 79650
|| || ||| | | | || || | ||| |||| ||||| || || ||| |
Sbjct 88708 TCGGTTTCAACAAAGGCTGGAAGAGCAATAGAAGCCAAGTTACAGACAGCAGTCTCTTCC 88767
Query 79651 GCATCCGCATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAATTT 79710
| | |||| | |||||| ||| |||||| | |||||| || || ||
Sbjct 88768 GGGGAAGAGTATTCAACAATTTCACAGCAAAGGTTAGAGGATTTAATGACACCCAAGTTC 88827
Query 79711 TGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCA 79770
| || ||| | ||||||||||| ||||||||||| || ||||| ||||||||||||||
Sbjct 88828 TTCTGGTTAGTTTTTTTGTTACAAGCATCCTTATACAGCATGAATGGAGTACCAGTTTCT 88887
Query 79771 ATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATA-GACTTGTATCT 79829
| || | || | || || | ||| | | | || || || | | ||| |
Sbjct 88888 GTTTGTGCCTCAAGGATGGCGTACCAAAGCTTTTGGGCTTTGATGGTTTGTCTTCCACGA 88947
Query 79830 CTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAA 79889
| || || |||||||| | || ||| || || || ||||| | || ||| | |
Sbjct 88948 CCTTCCT-TTTCGTATCTTTCGTACAATTCCTCAAATTCATCTCCATAGACGTCGGCAAG 89006
Query 79890 TCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCAT 79949
|||||| ||| ||| | | || | ||| || |||| | | ||||| ||||||
Sbjct 89007 GCCAGGAGCTTCACTTGGAGAGAACAGGGTCCAATCGCCATTCTGTTCTACTCTTTTCAT 89066
Query 79950 AAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCC 80009
|| |||||||| ||||| | ||| |||| ||||| | ||| |||||| || ||
Sbjct 89067 GAACAGATCAGGGATCCACAAAGCGGGGAATAAGTCTCTAGCTCTGATCTCCTCTTTACC 89126
Query 80010 TGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATAT 80069
||||| || ||| | ||| || | || || | |||||| || |||||||| |
Sbjct 89127 ATGGTTCTTACGAATATCAATGAAGGCAAAGATGTCGGCATGCCATGGCTCCAAGTACAA 89186
Query 80070 GGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATA 80129
|| | | || || |||||||| || || || || | || | ||| ||||| || |
Sbjct 89187 AGCAAATGCACCAGGACGTTTGTTACCACCTTGGTCAACATAACGAGCAGTGTTGTTGAA 89246
Query 80130 AACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCC 80189
|| |||| |||||||||||||||||| || ||||| || || || | || ||| |||
Sbjct 89247 GACCCTCACCATTGGAATAATACCATTCGAAGTACCGTTAGTACCAGCAATGTAGGATCC 89306
Query 80190 ACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGC 80249
|||||||||||||| ||| | ||| ||||| || || |||| |||||||| ||
Sbjct 89307 TGTGGCACGAATATTATGAATGTGCAAACCAATTCCACCAGCAGTTTTGGAGATTAAAGC 89366
Query 80250 GCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAA 80309
||| || || ||||| || ||||| || || ||||| |||| || || ||
Sbjct 89367 ACATTCCTTCAAAGTATCGTAAATGCCTTCAATTGAGTCATCCCGCATGGCAACTAAGAA 89426
Query 80310 ACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGT 80369
||| |||||||| | || || || || ||||| | |||||||| || || ||
Sbjct 89427 ACATGATGACATTTGTGGGTGAGGGGTACCAGCGTTAAACAGAGTAGGAGAGGCATGAGT 89486
Query 80370 AAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATG 80429
|| | || | | || | || || || |||||| || | | || || |||
Sbjct 89487 GAAATACTTCTGACTCATAAAGTTATAAGTTTCAATAACTCTTGCAATGTCATCACCATG 89546
Query 80430 AATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTAT 80489
||| || | || |||||||| | || ||| ||||| | ||| | | || ||| ||
Sbjct 89547 AATGCCGATAGCAACACGCATAATCAAGTGTTGAGGACGTTCTGCAACATTACCATTAAT 89606
Query 80490 TTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCG 80549
| ||| | ||||||| ||||||| || || || ||||| ||||| || ||||||||
Sbjct 89607 TCTCAGAAGGTAAGATCTTTCCAAGGTCTTGAATCCAAAGTAGTTATACTGAAAGTCTCT 89666
Query 80550 TTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGTGAT 80609
||||| | |||| | ||||| || | ||| | ||| | || | | |||
Sbjct 89667 ATCGTAGACAATAGCAGAGTTCAGCTCATCAGCGTGTTTCTGGACAATGTTGTAAGTG-- 89724
Query 80610 ACTT--GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCC 80667
||| |||| | ||||| ||||| || || || || || | || | | || ||
Sbjct 89725 TCTTCAGAAACCAGAGGAGAGTGTTTTCCGTTCTTTGGGTTGATGTATTCATACAACTCT 89784
Query 80668 TCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTG 80727
| | || | | || | || | || | ||||||| ||| || || || |||||
Sbjct 89785 TTGGTTACCTGAGAGTATTGCTTAGTGGTCTGTTTGTGTAAATTGGAAACAGCAATTCTT 89844
Query 80728 GCGGCTAAAATGGCATAATCTGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCC 80787
|| || |||||||||||||| || || || || | ||| || | || || ||
Sbjct 89845 GCTGCCAAAATGGCATAATCGGGGTGAATAGTGGTCATATAGGCAGCAGTCTCAGCAGCA 89904
Query 80788 AGAGTGTCCAATTCTACCGTTGTTACTCCATTATA 80822
|| |||||| || || || ||||| || | |||
Sbjct 89905 AGGTTGTCCAGCTCCACGGTAGTTACACCGTGATA 89939
>seq31
Length=329313
Score = 183 bits (202), Expect = 4e-41
Identities = 579/883 (66%), Gaps = 16/883 (2%)
Strand=Plus/Plus
Query 49669 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 49728
|||||||| ||| || | |||||||| || || ||||| || |||| || || ||
Sbjct 9109 TTTTGGTAATCAGAAACTCTCTTTTCGAAGAAGTTGGTTTTACCGGCCAAAGAAATGTTC 9168
Query 49729 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 49788
|||||||| ||||| |||||| | || || || | ||||| |||| | |
Sbjct 9169 TCCATGAAGTCAAATGGATTGTTGACGTTGTACACCTTTTTGTTGCCCAGAGCTACCAGT 9228
Query 49789 AATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTA-TAAG 49847
| ||| || || || || || | ||| ||||| || ||||| || | ||||
Sbjct 9229 AGTCTGTCAGCAACGAACTCAACATACTGGCACATCAAGCTGCAGTTCATCCCCAGTAAG 9288
Query 49848 TTTAACTGGAAGAGCCGCAGT-AAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAA 49906
| | |||||||| | || ||| | | || ||| || || || ||||| ||||
Sbjct 9289 GAGA-CAGGAAGAGCGTCTGTGAAGTACCTTTT-TTCGATCTCGACAGCCTCTGTGATAA 9346
Query 49907 TAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGA 49966
| | |||| |||| ||||| | | || |||||| ||| | ||| || || |
Sbjct 9347 TCTTTTCAACGATTTCCTCACTGGCTCTATTGTTTAAATGAGAAAATAGCAAGCAAGCAA 9406
Query 49967 AATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCA 50026
| || ||| | ||||||||||| | ||| || || ||||| || || | || ||||
Sbjct 9407 AGTCAGTGTGTAATCCCTCGTCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCTGGCA 9466
Query 50027 TTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTT 50086
| || || | ||| || | ||| || || || ||||| || || ||||||||||| || |
Sbjct 9467 TGAGACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAAGATCCTGAAAAGAAGATACCCT 9526
Query 50087 CTACTGCGGCAAAGGCAACAAGTCTCTC-TCCATAACTG--GCGCTGTCATGTATCCA-C 50142
| || || || |||||||| | | || | | | || || ||| ||||| |
Sbjct 9527 CAACAGCAGCGAAGGCAACCAAACGTTCAGCGAACAATGCATCGTCATCAGAAATCCATC 9586
Query 50143 TTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGA 50202
| || ||||| || ||||| | ||| | ||| || || || || |||||||| || ||
Sbjct 9587 TCATG-GCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTCGATGGCATTGAACAGG 9645
Query 50203 TAGtttttttCATTACTATCTTTAACATAAGTATCGATCA--AAAGACTATACATTTCCG 50260
| | || || |||||| | |||||||| |||| || || || | || |
Sbjct 9646 AATTCAGACTCTTTTGGATCTTTGATGTAAGTATCAATCAGCAAGGA--GTAAGTCTCGG 9703
Query 50261 AATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCA 50320
| |||||||| || || ||||| || ||||| || ||| | || |||| || || |
Sbjct 9704 AGTGAATGTTCTCCATCATGATCTGGAAACCGTAAAAGCATTTTGCTTCGGGAAGTTGAA 9763
Query 50321 CTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAA 50380
| || | || || ||| | || |||||||| || || |||||| ||| ||||| |
Sbjct 9764 CCTCAGCACTGAAATTTTCCACCAAGTTTTCATTGACAATACCGTCAGAGGCAGCAAAGA 9823
Query 50381 ACGCCAATACATGTTTTATAAAATGTTTTTCGT--TGGGTGTTA-GTTTATTCCAATCAT 50437
| || | || || || |||||| | | | | || | |||||||| ||||
Sbjct 9824 AGGCAAGGACTCTCGAGATGAAGAATTTTTCATTATCGTTCATACGATTATTCCAGTCAT 9883
Query 50438 TGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTAT 50497
| ||| ||| | |||| ||| || | |||||||| || || || |||| || |
Sbjct 9884 GCAAATCCTTACCCAGGTCTATTTCCTCAGCAGTCCAAAAGGAAGCTTCGGCCTGCTTGT 9943
Query 50498 ACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAA 50540
|||| | |||||| || || || | | ||||| | |||||
Sbjct 9944 ACATTTGCCAGATATCGTGGTACTTCAAAGGGAAGAGCACAAA 9986
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718267318570600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |