Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016575.1_202016-02-08] 165 sequences; 9,355,305 total letters Query= NC_006146.1 Length=171096 Score E Sequences producing significant alignments: (Bits) Value seq94 379 2e-100 seq92 187 3e-42 >seq94 Length=794 Score = 379 bits (420), Expect = 2e-100 Identities = 267/304 (88%), Gaps = 2/304 (1%) Strand=Plus/Plus Query 91292 GGCAGGAGTGATGTAACTTATTAGGAGACGCCCTCAATCGTATTAAAAGCCATGTATTCC 91351 ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| Sbjct 300 GGCAGGAGTGATGTAACTTGTTAGGAGACGCCCTCAATCGTATTAAAAGCCGTGTATTCC 359 Query 91352 CCCGCACTAAAGAATAAACCCCC--TTGCCATCATGCGTGCTGTTAGTGGGTTTCTGTCC 91409 |||||||||||||||||| |||| | | |||||||||||||||| ||| |||||| || Sbjct 360 CCCGCACTAAAGAATAAATCCCCAGTAGACATCATGCGTGCTGTTGGTGTATTTCTGGCC 419 Query 91410 GTCTTTCTCGCTGTCATTTTTGTCCTCCCCACGTGGGGCAACTGGGCCTACCCATGTTGT 91469 ||| ||| | |||||| |||||||| || |||||||| ||||| |||||||||||| Sbjct 420 ATCTGTCTTGTCACCATTTTCGTCCTCCCAACATGGGGCAATTGGGCATACCCATGTTGT 479 Query 91470 CATGTCACTCAGCTCCGCGCTGAACACCTCCTTGCGCTGGAAAACATCAGCGACATTTAC 91529 || |||||||||||||||||| ||||||| || ||| |||||||||| |||||||||||| Sbjct 480 CACGTCACTCAGCTCCGCGCTCAACACCTTCTCGCGTTGGAAAACATTAGCGACATTTAC 539 Query 91530 CTGGTGAGCAATAAGACCTGTGATGGCTTCAGCCTGGCCTCCTTAAATTCAGCAAAGAAC 91589 |||||||||||| |||| || || ||||| ||||||||||||||||||||| | ||||| Sbjct 540 CTGGTGAGCAATCAGACATGCGACGGCTTTAGCCTGGCCTCCTTAAATTCACCTAAGAAT 599 Query 91590 GGGA 91593 |||| Sbjct 600 GGGA 603 >seq92 Length=801 Score = 187 bits (206), Expect = 3e-42 Identities = 202/267 (76%), Gaps = 3/267 (1%) Strand=Plus/Minus Query 89401 CTCTTGTCCCGTTGCCCCTGTAGCATCGTTGCTGGGTGACTACGAGGAGGCTGCAGTGGA 89460 || || | |||||||||| |||||||| || |||||| || |||| | | || Sbjct 298 CTTTTCTTCCGTTGCCCCAGTAGCATCTCTGTCTGGTGACCTTGAAGAGGAAGAGGAGGG 239 Query 89461 GTCCTCGGACTCCCGGTCCCTACCATCCAGCGATGGGGGGATGGAGGAGTTTGAGGCCTG 89520 |||| || |||| |||||||| |||||| | |||| ||||| ||||||||||| Sbjct 238 GTCCCGAGAATCCCCATCCCTACCGTCCAGCAAAAAGGGGGACGAGGAATTTGAGGCCTG 179 Query 89521 GTTGGAGGCCCAAGAGGCTAACTTCGACGAGGTGCAGCGGGAGTTTTCTGGGTTGCGGGT 89580 | | ||||| || || || || | || || || |||||||||||||| ||| |||| || Sbjct 178 GCTTGAGGCTCAGGACGCAAATCTTGAGGATGTTCAGCGGGAGTTTTCCGGGCTGCGAGT 119 Query 89581 AACCGGTGAGGAGGCAGATGATGGTTCCTACGATGAGGGTGAATTTTCAGACTTGGATCT 89640 || ||||| |||| || |||||||| || || || |||||||||||| ||||||| Sbjct 118 AATTGGTGATGAGGACGAGGATGGTTC---GGAGGATGGGGAATTTTCAGACCTGGATCT 62 Query 89641 GTCTGACAGCGACCACGAGGGGGATGA 89667 ||||||||||||||| || |||||||| Sbjct 61 GTCTGACAGCGACCATGAAGGGGATGA 35 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547378071030400