Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016575.1_202016-02-08]
165 sequences; 9,355,305 total letters
Query= NC_006146.1
Length=171096
Score E
Sequences producing significant alignments: (Bits) Value
seq94 379 2e-100
seq92 187 3e-42
>seq94
Length=794
Score = 379 bits (420), Expect = 2e-100
Identities = 267/304 (88%), Gaps = 2/304 (1%)
Strand=Plus/Plus
Query 91292 GGCAGGAGTGATGTAACTTATTAGGAGACGCCCTCAATCGTATTAAAAGCCATGTATTCC 91351
||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||
Sbjct 300 GGCAGGAGTGATGTAACTTGTTAGGAGACGCCCTCAATCGTATTAAAAGCCGTGTATTCC 359
Query 91352 CCCGCACTAAAGAATAAACCCCC--TTGCCATCATGCGTGCTGTTAGTGGGTTTCTGTCC 91409
|||||||||||||||||| |||| | | |||||||||||||||| ||| |||||| ||
Sbjct 360 CCCGCACTAAAGAATAAATCCCCAGTAGACATCATGCGTGCTGTTGGTGTATTTCTGGCC 419
Query 91410 GTCTTTCTCGCTGTCATTTTTGTCCTCCCCACGTGGGGCAACTGGGCCTACCCATGTTGT 91469
||| ||| | |||||| |||||||| || |||||||| ||||| ||||||||||||
Sbjct 420 ATCTGTCTTGTCACCATTTTCGTCCTCCCAACATGGGGCAATTGGGCATACCCATGTTGT 479
Query 91470 CATGTCACTCAGCTCCGCGCTGAACACCTCCTTGCGCTGGAAAACATCAGCGACATTTAC 91529
|| |||||||||||||||||| ||||||| || ||| |||||||||| ||||||||||||
Sbjct 480 CACGTCACTCAGCTCCGCGCTCAACACCTTCTCGCGTTGGAAAACATTAGCGACATTTAC 539
Query 91530 CTGGTGAGCAATAAGACCTGTGATGGCTTCAGCCTGGCCTCCTTAAATTCAGCAAAGAAC 91589
|||||||||||| |||| || || ||||| ||||||||||||||||||||| | |||||
Sbjct 540 CTGGTGAGCAATCAGACATGCGACGGCTTTAGCCTGGCCTCCTTAAATTCACCTAAGAAT 599
Query 91590 GGGA 91593
||||
Sbjct 600 GGGA 603
>seq92
Length=801
Score = 187 bits (206), Expect = 3e-42
Identities = 202/267 (76%), Gaps = 3/267 (1%)
Strand=Plus/Minus
Query 89401 CTCTTGTCCCGTTGCCCCTGTAGCATCGTTGCTGGGTGACTACGAGGAGGCTGCAGTGGA 89460
|| || | |||||||||| |||||||| || |||||| || |||| | | ||
Sbjct 298 CTTTTCTTCCGTTGCCCCAGTAGCATCTCTGTCTGGTGACCTTGAAGAGGAAGAGGAGGG 239
Query 89461 GTCCTCGGACTCCCGGTCCCTACCATCCAGCGATGGGGGGATGGAGGAGTTTGAGGCCTG 89520
|||| || |||| |||||||| |||||| | |||| ||||| |||||||||||
Sbjct 238 GTCCCGAGAATCCCCATCCCTACCGTCCAGCAAAAAGGGGGACGAGGAATTTGAGGCCTG 179
Query 89521 GTTGGAGGCCCAAGAGGCTAACTTCGACGAGGTGCAGCGGGAGTTTTCTGGGTTGCGGGT 89580
| | ||||| || || || || | || || || |||||||||||||| ||| |||| ||
Sbjct 178 GCTTGAGGCTCAGGACGCAAATCTTGAGGATGTTCAGCGGGAGTTTTCCGGGCTGCGAGT 119
Query 89581 AACCGGTGAGGAGGCAGATGATGGTTCCTACGATGAGGGTGAATTTTCAGACTTGGATCT 89640
|| ||||| |||| || |||||||| || || || |||||||||||| |||||||
Sbjct 118 AATTGGTGATGAGGACGAGGATGGTTC---GGAGGATGGGGAATTTTCAGACCTGGATCT 62
Query 89641 GTCTGACAGCGACCACGAGGGGGATGA 89667
||||||||||||||| || ||||||||
Sbjct 61 GTCTGACAGCGACCATGAAGGGGATGA 35
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547378071030400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |