Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016575.1_202016-02-08]
165 sequences; 9,355,305 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq31 170 2e-37
seq42 82.4 9e-11
>seq31
Length=329313
Score = 170 bits (188), Expect = 2e-37
Identities = 583/901 (65%), Gaps = 17/901 (2%)
Strand=Plus/Plus
Query 92790 CATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTC 92849
||| ||||| |||||||| || |||| | ||||| ||||| || || || || |
Sbjct 9096 CATGACACCTGCCTTTTGGTAATCAGAAACTCTCTTTTCGAAGAAGTTGGTTTTACCGGC 9155
Query 92850 CAAAGATATCGAATTCACTA-GTGAT-TGGATTCTTGGCGTTATAATACTTTTCACCGAT 92907
|||||| || | || | || | |||||| ||| |||| || ||||| |
Sbjct 9156 CAAAGAAATGTTCTCCATGAAGTCAAATGGATTGTTGACGTTGTACACCTTTTTGTTGCC 9215
Query 92908 CAACTCGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATT 92967
|| | || || ||| ||||| || || || | ||||| ||||||| || ||
Sbjct 9216 CAGAGCTACCAGTAGTCTGTCAGCAACGAACTCAACATACTGGCACATCAAGCTGCAGTT 9275
Query 92968 CATTCCTAG-AAGACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGG 93026
||| || || ||| | ||||| |||||||| || ||| | ||| ||||| | || |
Sbjct 9276 CATCCCCAGTAAGGAG-ACAGGAAGAGCGTCTGTGAAGTACCTTTTTTCGATCTCGACAG 9334
Query 93027 CTTCTTTCAAGATTTCTATTAC--TCTACTATTTGG---TGGTTTTTGTACGACATAATT 93081
| ||| | | || | | || | | || ||| | | ||| | || | |||
Sbjct 9335 CCTCTGTGATAATCTTTTCAACGATTTCCTCACTGGCTCTATTGTTTAAATGAGAAAATA 9394
Query 93082 GTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCT 93141
| | |||| |||||||| || ||||| || ||||||| | || | |||||||
Sbjct 9395 GCA-----AGCAAGCAAAGTCAGTGTGTAATCCCTCGTCTCTGCAAATAAGCTCATTGGA 9449
Query 93142 GAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACC 93201
||| || |||||||| | || |||| ||||| | ||| || || ||||||||| ||
Sbjct 9450 GAAGGTCAAACCTGGCATGAGACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAAGATCC 9509
Query 93202 AGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGA 93261
||||| || ||||| || || || || || || || | |||||| || || |||
Sbjct 9510 TGAAAAGAAGATACCCTCAACAGCAGCGAAGGCAACCAAACGTTCAGCGAACAATGCATC 9569
Query 93262 ATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTC 93321
| | |||||| | | ||||| || || |||| || ||||| || | || ||
Sbjct 9570 GTCATCAGAAATCCATCTCATGGCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTC 9629
Query 93322 GATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAG 93381
||| || || || ||| | || ||| | | |||| ||||| ||||| || | ||
Sbjct 9630 GATGGCATTGAACAGGAATTCAGACTCTTTTGGATCTTTGATGTAAGTATCAATCAGCAA 9689
Query 93382 AGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGC 93441
|| || | || || || | |||||||| || ||||| ||||| || ||| | ||
Sbjct 9690 GGAGTAAGTCTCGGAGTGAATGTTCTCCATCATGATCTGGAAACCGTAAAAGCATTTTGC 9749
Query 93442 TTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATC 93501
||| | | || || || | || | || || | ||||||||||| ||||| ||
Sbjct 9750 TTCGGGAAGTTGAACCTCAGCACTGAAATTTTCCACCAAGTTTTCATTGACAATACCGTC 9809
Query 93502 GGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTT---TAAG 93558
|| || ||||| || || | | | || || ||| |||| ||| | || |
Sbjct 9810 AGAGGCAGCAAAGAAGGCAAGGACTCTCGAGATGAAGAATTTTTCATTATCGTTCATACG 9869
Query 93559 CTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGC 93618
|||| ||| || | ||| || || || | ||| || |||||||||| || ||
Sbjct 9870 ATTATTCCAGTCATGCAAATCCTTACCCAGGTCTATTTCCTCAGCAGTCCAAAAGGAAGC 9929
Query 93619 TTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAAACG 93678
||| || | |||||||| | ||| || || || || | | || || | ||||||||
Sbjct 9930 TTCGGCCTGCTTGTACATTTGCCAGATATCGTGGTACTTCAAAGGGAAGAGCACAAAACG 9989
Query 93679 A 93679
|
Sbjct 9990 A 9990
>seq42
Length=230140
Score = 82.4 bits (90), Expect = 9e-11
Identities = 63/71 (89%), Gaps = 3/71 (4%)
Strand=Plus/Plus
Query 126272 TTGGCCGAGT-GGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA-GCGTGGGTT 126329
|||||||||| |||||||||||||||||| | | ||||| || ||| ||| |||||||||
Sbjct 41138 TTGGCCGAGTTGGTCTAAGGCGCCAGATTAAGGTTCTGG-TCTCTCCGGAGGCGTGGGTT 41196
Query 126330 CGAACCCCACA 126340
|||||||||||
Sbjct 41197 CGAACCCCACA 41207
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556859651474600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |