Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016575.1_202016-02-08] 165 sequences; 9,355,305 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq19 163 5e-35 seq23 161 2e-34 seq4 154 3e-32 seq22 145 1e-29 >seq19 Length=629025 Score = 163 bits (180), Expect = 5e-35 Identities = 162/210 (77%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||| ||| | || ||||| || |||||||| || || || || || || || ||||| Sbjct 86095 ACCAGGTGCAAAGTAGACTCCTTCTGGATGTTGTAGTCAGACAGAGTTCTACCGTCTTCC 86036 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 | ||||| || || || || | | ||||||||| || ||||| ||||||||||||||| Sbjct 86035 AGTTGCTTACCAGCAAAAATCAAACGTTGTTGGTCAGGAGGAATTCCTTCCTTGTCTTGA 85976 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 ||||| | |||||| ||||||||||| | || || ||||||||||| || || || Sbjct 85975 ATCTTGGACTTGACATTGTCGATGGTGTCGGAGGACTCGACTTCCAAGGTAATAGTCTTA 85916 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || || | |||||||||||| ||||||||| Sbjct 85915 CCGGTTAAGGTCTTGACGAAAATCTGCATT 85886 >seq23 Length=213739 Score = 161 bits (178), Expect = 2e-34 Identities = 163/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 68250 AATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCT 68309 ||||||||||| || ||||| || ||||| || || ||||| || || || || || ||| Sbjct 324 AATACCAAGTGAAGAGTGGATTCCTTTTGAATATTGTAATCAGAAAGAGTTCTACCGTCT 265 Query 68310 TCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCT 68369 || | ||||| || ||||| || | | ||| ||||| || ||||| |||||||||||| Sbjct 264 TCCAGTTGCTTACCAGCGAAGATCAAACGTTGCTGGTCAGGAGGAATACCTTCCTTGTCT 205 Query 68370 TGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTT 68429 |||||||| | |||||| || || || |||| ||| ||||| || | ||||| || Sbjct 204 TGAATCTTAGATTTGACGTTATCAATAGTATCTGATGACTCTACCTCAAGAGTGATAGTC 145 Query 68430 TTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || || ||||||||||| |||||||| Sbjct 144 TTACCAGTTAGAGTCTTGACGAAAATCTGCAT 113 >seq4 Length=372207 Score = 154 bits (170), Expect = 3e-32 Identities = 162/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||||||| | || ||||| ||||||||||| || || || | || || ||||| || Sbjct 292974 ACCAAGTGCAAAGTAGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCATCCTCC 293033 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 || ||||| || || || || || | |||||||| || ||||| || |||||||| ||| Sbjct 293034 AATTGCTTACCAGCAAAGATCAGACGCTGTTGGTCAGGAGGAATTCCCTCCTTGTCCTGA 293093 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 ||||| | ||||||| || || ||||| | || || || ||||||||||| || || Sbjct 293094 ATCTTGGACTTGACGTTGTCAATAGTGTCGGAAGACTCCACCTCCAAGGTGATAGTCTTA 293153 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465 || || |||||||| ||||| || |||||| || Sbjct 293154 CCGGTAAGGGTCTTTACGAAAATTTGCATTTTG 293186 >seq22 Length=162238 Score = 145 bits (160), Expect = 1e-29 Identities = 158/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||||||| || ||||| || ||||||||||| ||||| || || || || || ||||| Sbjct 162139 ACCAAGTGGAGGGTGGATTCCTTTTGGATGTTGTAATCAGAAAGAGTTCTACCGTCTTCC 162080 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 | ||||| || || || || | | ||| ||||| || ||||| |||||||| |||||| Sbjct 162079 AGTTGCTTACCAGCAAAAATTAAACGTTGCTGGTCAGGAGGAATACCTTCCTTATCTTGA 162020 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 ||||| | ||||| || || ||||||| ||| || || || | ||||| || || Sbjct 162019 ATCTTGGATTTGACATTATCAATAGTGTCTGATGACTCCACCTCAAGAGTGATAGTCTTA 161960 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || || ||||| || || || ||||||||| Sbjct 161959 CCTGTTAGGGTTTTAACAAAAATCTGCATT 161930 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921620499153800