Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016575.1_202016-02-08]
165 sequences; 9,355,305 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq36 246 4e-60
>seq36
Length=393897
Score = 246 bits (272), Expect = 4e-60
Identities = 962/1498 (64%), Gaps = 41/1498 (3%)
Strand=Plus/Plus
Query 109725 AAATTCACCAGCAAGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTC 109784
|||||| ||||| | | || || ||||||||| | ||||| ||||||||||||||
Sbjct 88170 AAATTCTCCAGCTAATACACGGCGTGAGTAGATGTTGGAAGTGTAAGGTTCGAAACACTC 88229
Query 109785 ATTGTTGCCTAGGATTTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTT 109844
|||| || || ||||| | ||| ||||| |||||||| || || | || | |||
Sbjct 88230 GTTGTAACCCAGAATTTGGGAAGTTGAAGCAGTGGGCATAGGTGCAACTAGCAACGAGTT 88289
Query 109845 TCGGAGACCCTTCGTCTTTACCCGCTCACGCATTGCGT----CCCAATCATAACGACCAC 109900
|| | ||| | | || || || ||| || |||| || | || |
Sbjct 88290 TCTTAAACCTGTGGAA---ACAATCTTG-GCTTTGAGTGATTCCCATTC----CCACAGC 88341
Query 109901 TAAATTTAGTCTCACCATCCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAAC 109960
| | | || ||||||| || ||| | | |||| || || |||||||
Sbjct 88342 TCAGAG--GGCTTCTTGTCCCACAAGTCATATTGCAAAATGCCCTGAGATGCTGGAGAAC 88399
Query 109961 CCTTGAAACTCTCGTACGACCCCTCAACCTCGGCCAACTCGGATGAAGCCTCTAGTGCCG 110020
| | ||| | ||||| | || || | |||| || ||| || || || | || |
Sbjct 88400 CTTGGAAGGTTTCGTAGGCTCCTTCTTCGACGGCTAATTCGTTGGAGGCTTCCAAAGCTG 88459
Query 110021 CATGATACATAGTCTCAAAAATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGG 110080
|||| || ||||| |||||||| ||| ||| | | | ||| | | || || |
Sbjct 88460 CATGGTAGATAGTTTCAAAAATCTGAATATTAAGCTGTTTGGCTTCTGGAGAATCAAAAG 88519
Query 110081 GAAGACCACAAAGAATAAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGAT 110140
||| | | ||||| |||| |||| ||| |||||||| | | | || || | ||
Sbjct 88520 GAATTCTCAACTTCATAAAAGCATCAGCTAAACCTTGAACACCCACAGCTATAGGTCTAT 88579
Query 110141 GCTTCATGTTAGAGCGTCGAGCAGTTTCT---ACGGGGTAAAAGTTGCGGTCGATGACCC 110197
||| || || | | ||| |||| ||||||||||| || | |||||| | |
Sbjct 88580 TACGCATATTCGATCTCCTAGC---TTCTGGAACGGGGTAAAAATTTCTGTCGATAATTC 88636
Query 110198 GATTGAGATTCTTCGTCACAGTCTTCGTGATTTCATGGAGTTTGTCGTAATCGAACGTT- 110256
|| | || || || || ||||||||||| || || || | | | ||
Sbjct 88637 TGTTCAAGTTACGAGTAACCACTTTGGTGATTTCATGCAGCTTTTCAAAGTTGTACCAGC 88696
Query 110257 --TTCGTCTCCT---TATTGACATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAG 110311
| || || | | | ||| | || ||||||||||| || | || || ||||
Sbjct 88697 AGTGAGTATCATCGGTTTCAACAAAGGCTGGAAGAGCAATAGAAGCCAAGTTACAGACAG 88756
Query 110312 AAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGA 110371
|||||| || | | |||||| | |||||| || | ||| || |||||||
Sbjct 88757 CAGTCTCTTCCGGGGAAGAGTATTCAACAATTTCACAGCAAAGGTTAGAGGATTTAATGA 88816
Query 110372 CACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGG 110431
|||||||||||||||| || | ||| ||| || ||||||||||| |||||| |||| |
Sbjct 88817 CACCCAAGTTCTTCTGGTTAGTTTTTTTGTTACAAGCATCCTTATACAGCATGAATGGAG 88876
Query 110432 TACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCCATACATCGGCGGCGGGGACAGTTG 110491
|||||||||| || |||| || || ||||| | ||| | | ||| || |||
Sbjct 88877 TACCAGTTTCTGTTTGTGCCTCAAGGATGGCGTACCAAAGCTTTTGGGCTTTGATGGTTT 88936
Query 110492 CGTTAGCGAGACCTTCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACA 110551
| | ||||||||| ||||| | |||||| ||||||||||| | ||| || |
Sbjct 88937 GTCTTCCACGACCTTCCTTTTCGTATCTTTCGTACAATTCCTCAAATTCATCTCCATAGA 88996
Query 110552 CATCAGAAAGACCCTTCGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAA 110611
| || | ||| || || | ||| |||| |||| ||||| ||| || || |
Sbjct 88997 CGTCGGCAAGGCCAGGAGCTTCACTTGGAGAGAACAGGGTCCAATCGCCATTCTGTTCTA 89056
Query 110612 CCCTCTTCATGAACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCAC-GGCAACGAGCC 110670
| || ||||||||||| ||||| ||||||| || | ||| | ||| | || || |
Sbjct 89057 CTCTTTTCATGAACAGATCAGGGATCCACAAAGCGGGGAATAAGTCTCTAGCTCTGA-TC 89115
Query 110671 TCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGT 110730
|| || | ||| ||||| || | || | ||| | | ||| || | ||||||||
Sbjct 89116 TCCTCTTTACCATGGTTCTTACGAATATCAATGAAGGCAAAGATGTCGGCATGCCATGGC 89175
Query 110731 TCGAGATAGACAGCGATGGATCCCTTACGACG------ACCCGCCTGGTTAACATAGCGT 110784
|| | || | ||| | || | | |||| ||| | |||| |||||| ||
Sbjct 89176 TCCAAGTACAAAGCAA---ATGCACCAGGACGTTTGTTACCACCTTGGTCAACATAACGA 89232
Query 110785 GCTGTGGCATTGAAGACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCC 110844
|| ||| ||||||||||| | ||| |||||||| |||| || ||| || |||||
Sbjct 89233 GCAGTGTTGTTGAAGACCCTCACCATTGGAATAATACCATTCGAAGTACCGTTAGTACCA 89292
Query 110845 CTAATTCTGGACTTATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCAC 110904
||| ||| |||||||||| | || || |||| |||||| ||||| ||
Sbjct 89293 GCAATGTAGGATCCTGTGGCACGAATATTATGAATGTGCAAACCAATTCCACCAGCAGTT 89352
Query 110905 TTACTAATTTGTGCACACTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTG 110964
|| ||| ||||| || | | ||| | ||||| || ||||| || || ||
Sbjct 89353 TTGGAGATTAAAGCACATTCCTTCAAAGTATCGTAAATGCCTTCAATTGAGTCATCCCGC 89412
Query 110965 TTGGCAATTAGAAAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTA 111024
|||||| || || || || ||||| || || |||| || || || || || || |||
Sbjct 89413 ATGGCAACTAAGAAACATGATGACATTTGTGGGTGAGGGGTACCAGCGTTAAACAGAGTA 89472
Query 111025 GGTGTCGCATGAATGAACAGACCT-TGGGACATCTTGTTGTATGTGTCGAGTGCGGAGGG 111083
|| | |||||| |||| | || | || ||| ||| || || || | | |
Sbjct 89473 GGAGAGGCATGAGTGAA-ATACTTCTGACTCATAAAGTTATAAGTTTCAATAACTCTTGC 89531
Query 111084 TACATCTTTACCGTGAATACCAATGGCAACTCGCATGAACATATATTGAGGCGTTTCGAT 111143
| || | ||| ||||| || || ||||| ||||| | || | |||||| |||
Sbjct 89532 AATGTCATCACCATGAATGCCGATAGCAACACGCATAATCAAGTGTTGAGGACGTTCTGC 89591
Query 111144 TAGCTTTCCATCAACACGCTGAAGGTAA-CTCTTCTCTAGGGTCTTGAGACCAAAGTA 111200
| || |||| || | | |||||||| |||| || | |||||||| ||||||||
Sbjct 89592 AACATTACCATTAATTCTCAGAAGGTAAGATCTT-TCCAAGGTCTTGAATCCAAAGTA 89648
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588974785237000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |