Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016575.1_202016-02-08]
165 sequences; 9,355,305 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq36 215 2e-50
seq40 102 2e-16
seq22 100 8e-16
seq3 98.7 3e-15
seq31 89.7 2e-12
>seq36
Length=393897
Score = 215 bits (238), Expect = 2e-50
Identities = 626/947 (66%), Gaps = 25/947 (3%)
Strand=Plus/Plus
Query 155582 AAGACCAATAGACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTGTATTCTACAAT 155641
|||| ||||||| |||| ||||| || |||||||| | | |||||| |||||
Sbjct 88728 AAGAGCAATAGAAGCCAAGTTACAGACAGCAGTCTCTTCCGGGGAAGAGTATTCAACAAT 88787
Query 155642 CTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTT 155701
|||||||| |||||||| || ||| || || ||||||||||||| ||| ||||
Sbjct 88788 TTCACAGCAAAGGTTAGAGGATTTAATGACACCCAAGTTCTTCTGGTTAGTTTTTTTGTT 88847
Query 155702 ACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCTT 155761
|||||||||||| || || ||| |||| || || || || | ||||| || || ||
Sbjct 88848 ACAAGCATCCTTATACAGCATGAATGGAGTACCAGTTTCTGTTTGTGCCTCAAGGATGGC 88907
Query 155762 TAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTG-CCTTCCGACTCATATTTCA 155820
||| || | |||| || || | |||| | | |||||| || ||| |
Sbjct 88908 GTACCAAAGCTTTTGGGCTTTGATG-GTTTGTCTTCCACGACCTTCCTTTTCGTATCTTT 88966
Query 155821 TATACAGCGTTCGGTAA--TCCTCACCGTAACAATCACTCAGTCCAGGG----CACTTAT 155874
|||| ||| || || || || || || || ||||| |||||
Sbjct 88967 CGTACAA--TTCCTCAAATTCATCTCCATAGACGTCGGCAAGGCCAGGAGCTTCACTT-- 89022
Query 155875 CGGGGCAAAACAGCGACCAAATTTTATTACCGAT-TACACGCTCCATAAATACATCACTC 155933
|| | ||||| | |||| ||| | | | ||| | | ||| || | ||||
Sbjct 89023 --GGAGAGAACAGGGTCCAATCGCCATT-CTGTTCTACTCTTTTCATGAACAGATCAGGG 89079
Query 155934 GCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGA-CTCCTCATCGCCGTGATTCTTCCG 155992
||| | ||| ||| | ||| || || | ||| |||||| | || || ||||| ||
Sbjct 89080 ATCCACAAAGCGGGGAATAAGTCTCTAGC-TCTGATCTCCTCTTTACCATGGTTCTTACG 89138
Query 155993 TAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACC 156052
| || | ||| | || || | ||| |||||||| |||| |||||| |||
Sbjct 89139 AATATCAATGAAGGCAAAGATGTCGGCATGCCATGGCTCCAAGTACAAAGCAAATGCACC 89198
Query 156053 ATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCAT 156109
| | ||| ||||| || || ||||| |||||||| || |||||||| | | |||
Sbjct 89199 AGGACGTTTGTTACCACCTTGGTCAACATAACGAGCAGTGTTGTTGAAGACCCTCACCAT 89258
Query 156110 AGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAAC 156169
|||||||||||||| ||||| || || || || ||| | || || | | ||||
Sbjct 89259 TGGAATAATACCATTCGAAGTACCGTTAGTACCAGCAATGTAGGATCCTGTGGCACGAAT 89318
Query 156170 ATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTAC 156229
||||||||| || | ||||| ||||| | ||| || ||| ||| |||||||| |
Sbjct 89319 ATTATGAATGTGCAAACCAATTCCACCAGCAGTTTTGGAGATTAAAGCACATTCCTTCAA 89378
Query 156230 AGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAA 156289
||||| | |||| |||||||| || ||||| ||| | | || | || || |
Sbjct 89379 AGTATCGTAAATGCCTTCAATTGAGTCATCCCGCATGGCAACTAAGAAACATGATGACAT 89438
Query 156290 TTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATT 156349
||| || | || || |||||||| || || ||||| | |||||| | |||||||| |
Sbjct 89439 TTGTGGGTGAGGGGTACCAGCGTTAAACAGAGTAGGAGAGGCATGAGTGAAATACTTCTG 89498
Query 156350 AGACATATAATCGTATGTCTCCTTAA-TCTTCTCAAGATTAGACCCGTGAATACAGATAG 156408
| |||| | | || || || ||| |||| ||| | | || ||||| | |||||
Sbjct 89499 ACTCATAAAGTTATAAGTTTCAATAACTCTT-GCAATGTCATCACCATGAATGCCGATAG 89557
Query 156409 AGACCCTCATCCACATATGCTGAGGACGCTCTACAATCACT-CCATCAATTCGCAGAAGG 156467
|| | ||| || || |||||||| ||| ||| || | |||| ||||| |||||||
Sbjct 89558 CAACACGCATAATCAAGTGTTGAGGACGTTCTGCAA-CATTACCATTAATTCTCAGAAGG 89616
Query 156468 TATGCGCGTTCCAGAGTTTTAAACCCGAAATAATCAAACAGAAAATC 156514
|| | | ||||| || || || || || || | | || |||| ||
Sbjct 89617 TAAGATCTTTCCAAGGTCTTGAATCCAAAGTAGTTATACTGAAAGTC 89663
>seq40
Length=318577
Score = 102 bits (112), Expect = 2e-16
Identities = 380/579 (66%), Gaps = 30/579 (5%)
Strand=Plus/Plus
Query 251424 ACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGACCCTTGGTGAAGCGAGA 251483
||||||||| || | | ||||||||||||| || || | |||| ||| | ||
Sbjct 235360 ACACACATGTACTCGGAAAGCATCAGATGCTTCCATTAATCTTTCCTTCAAGAAACCAGC 235419
Query 251484 TGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCG 251543
|||||||| | ||||||||| || | ||||| || |||||||||||||||||||| ||
Sbjct 235420 GGCACCGTGAGCAATCATACAGTCTCTTTCCATCTCTCCGAAACGAAGACCACCATCACG 235479
Query 251544 AGCCCTACCCTCGGCAGGCTGACGAGT-GAGATTAACCATAGGACCGATGGAGCGGCTAT 251602
| ||||| || |||| || | || ||| | | ||| || ||| | | ||
Sbjct 235480 GGATCTACCTTCTACAGGTTGTCTGGTCAAGACT-TGTACAGGTCCTCTGGCTCTGGCAT 235538
Query 251603 GTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGATGC 251662
| |||||||| |||||||| | || | |||||| ||| || || | ||| | |
Sbjct 235539 GAATCTTATCATCCACCATATGTCTCAGTCTCTGGTAATATGTTGGTCCAAAGAATA-CC 235597
Query 251663 TCGAAGGCAT---TTGCTCTCCAGTTAGAGCGTTATACATAACTTCGTTTCCATTAGATT 251719
| | | ||| || | ||||| | | || ||||| ||||| ||| ||||||
Sbjct 235598 TGG--GCCATTAATTTTTTACCAGTGTGTCCATTGTACATTACTTCAAATCCTCTAGATT 235655
Query 251720 CATAACCAAGTT---TCTGTAGCTCTGAAGCAATATCACCAATCTTGAATTTGCTAAAAC 251776
||| ||| | || | || | ||| | || ||| | || ||| || ||||
Sbjct 235656 GATACCCATTATCCCTCAGAAGGTTGGAAACCGCAT--CCACTGTTAAATCTG-TAAA-- 235710
Query 251777 TGGTG--CCGTCTCCGTAAAGAC--CCATTTGAATCAAC---ACTTTGCCTAAAAGTGTC 251829
||||| |||| || | | || | | | ||| |||| ||| || ||| |
Sbjct 235711 TGGTGTAGCGTCACCTTCATAACCTCTAATAGAACCAACCTTACTCAGC--AAA---CAC 235765
Query 251830 TCTTTCAGTTGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCG 251889
|| | | || || | ||||||||| ||||||||||| || || || || | |||
Sbjct 235766 TCAATTAAGTGCGCAACCGTCATACGAGAAGGAATAGCATGTGGGTTAATAATCAAATCG 235825
Query 251890 GGTTTCAGTCCATCAGCAGTGAAGGGCATATCCTTTTCCTCAATAA-TGTTTCCAATAGT 251948
|| | || || ||| |||| |||||||| | | | | |||| | ||||| ||
Sbjct 235826 GGAACGATACCCTCTGCACTGAATGGCATATCTTCGTGC-CTATAAGTAACACCAATGGT 235884
Query 251949 TCCCTTTTGTCCGTGACGAGAACTGAACTTATCACCAAT 251987
||||| || |||||||| || ||||||||||||||
Sbjct 235885 ACCCTTCTGACCGTGACGGGAGGCAAACTTATCACCAAT 235923
>seq22
Length=162238
Score = 100 bits (110), Expect = 8e-16
Identities = 309/470 (66%), Gaps = 21/470 (4%)
Strand=Plus/Plus
Query 288883 TCTAATATATCGGCTCTGTTTGTTGCTGCCAATACAACAATAGATTCGGTTTGCTTAAAT 288942
|| || | ||| ||||||||||| | ||||| ||||||| | || | | |||
Sbjct 3776 TCCAAAACATCAGCTCTGTTTGTACCAGCCAAGACAACAACATGGTCAGAACTATCAAAA 3835
Query 288943 CCATCCATACTTGT-TAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAACCTC- 289000
|||||||| || | || | ||||| | ||| || ||||||| || |||||
Sbjct 3836 CCATCCAT-CTCGACTAGTAGCTGATTTAAAGTTGCCTCTTTTTCATCGTT---ACCTCC 3891
Query 289001 --TTGAATCACCCGAATCGCTCCtttttttACCAACAGCATCAATTTCGTCAATGAAAAT 289058
| ||| ||| | | || | || | ||| | ||||||||||| |||| ||| ||
Sbjct 3892 CATGGAACCACTCTTA---CTACGTTCTCGACCGATCGCATCAATTTCATCAACGAATAT 3948
Query 289059 CACACACGGAGAATTTTGTCTCGCAATTGC--AAATAATTCTCTTACACGGGATGCTCCA 289116
| | | || | | | ||| || |||| |||||| || | || ||||| ||||||
Sbjct 3949 GATAGATGGCGCCATCTTTCTAGC--TTGCTGAAATAAATCACGAACTCGGGAAGCTCCA 4006
Query 289117 AGACCAACATACATTTCTACAAATTCAGAAGCGGATACTTGAATGAATGTTACATTTGCT 289176
| ||| ||| ||||||| ||||| |||||| | || || | |||| || |||
Sbjct 4007 ACACCCACAAACATTTCCACAAACTCAGAACCCGAAACAGACAAAAATGGAACTCCAGCT 4066
Query 289177 TCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGA 289236
||||| || |||| |||| || | ||||||||| || || || || | | | |||
Sbjct 4067 TCGCCAGCAGTTGCCTTCGCTAGCAATGTCTTACCAGTACCTGGAGGAC---CAGAAAGA 4123
Query 289237 A---CTCCCTTTGGTACTTTTGCCCCAGCAGACTTATATTTCTCAGGGCTCTTTAAAAAT 289293
| | || |||| | |||||| || || |||||||| ||| |||| | ||
Sbjct 4124 ATTGCACCTCTTGGAATTTTTGCTCCTAGTTTCTCATATTTCTTAGGATTCTTCAGGAAC 4183
Query 289294 TCTACAATTTCCTCAAGTTCATATTTTGCCTCATCACATCCTGCTACATC 289343
| || | |||| || ||| | ||| || ||||| || || || || ||
Sbjct 4184 TGAACGAATTCCATAATTTCTTCTTTAGCTTCATCGCAACCCGCCACGTC 4233
>seq3
Length=116891
Score = 98.7 bits (108), Expect = 3e-15
Identities = 83/102 (81%), Gaps = 0/102 (0%)
Strand=Plus/Minus
Query 302583 CTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAG 302642
||| | ||||||||||||||||||||| ||| || ||||| |||||||||||||| |
Sbjct 114300 CTTCACTAAACGACGCTGAATATAACCTGTTTCAGCAGTTTTCACAGCTGTATCAATCAA 114241
Query 302643 ACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGG 302684
||| |||||||| |||| || || ||||| | ||||| |||
Sbjct 114240 ACCTTCACGACCAGCCATGGCGTGAAAGAAGAACTCTTGCGG 114199
>seq31
Length=329313
Score = 89.7 bits (98), Expect = 2e-12
Identities = 288/436 (66%), Gaps = 22/436 (5%)
Strand=Plus/Minus
Query 133232 GCGTTTTTTGCTGCGAGTGATGGTATTGTTCTTGAAAATTTAG--GAACACGGTTTATGG 133289
|| || |||||||| ||| |||||||| |||||| || | ||| | || | |
Sbjct 9827 GCCTTCTTTGCTGCCTCTGACGGTATTGTCAATGAAAACTTGGTGGAAAAT--TTCAGTG 9770
Query 133290 GAGAAGTTCAACTGGCCGAAGCCCGTGCCTTTTATGGGCTACAGATTGCGATGGAAAATA 133349
|| |||||||| ||||||| |||||| || | ||||| |||||| || |
Sbjct 9769 CTGAGGTTCAACTTCCCGAAGCAAAATGCTTTTACGGTTTCCAGATCATGATGGAGAACA 9710
Query 133350 TCCATTCTATCACATATTCTACTCTAATTGATACTTACATCAAAGATACCGTCCAGAAG- 133408
| || || || || || || |||||||||||||||||||| |||| |||
Sbjct 9709 TTCACTCCGAGACTTACTCCTTGCTGATTGATACTTACATCAAAGA-----TCCAAAAGA 9655
Query 133409 --CACAA--ACTATTCAACGCCATTAGCGA-ATTTCCTTGTATTAAAAAGAAATCTGACT 133463
| || || ||||| |||| | | || |||| ||||| ||| | || ||||||
Sbjct 9654 GTCTGAATTCCTGTTCAATGCCA-TCGAGACCATTCCATGTATCAAAGAAAAGGCTGACT 9596
Query 133464 GGGCTATTAAATGGATCCAGGACAAGCGTGCGAGTTTTGCTACTCGTCTCGTTGCTTTTG 133523
|||| || | |||||| || | ||| || ||| ||| | ||||| || |
Sbjct 9595 GGGCCATGAGATGGATTTCTGATGACGATGCATTGTTCGCTGAACGTTTGGTTGCCTTCG 9536
Query 133524 CTGTAGTAGAGGGCA--tttttttCAGTGGTGCGTTCTGC-TCTATTTTTTGGCTTAAAA 133580
||| || ||||| | || ||||||| | | || ||| ||||| || ||| | || |
Sbjct 9535 CTGCTGTTGAGGGTATCTTCTTTTCAG-GAT--CTTTTGCTTCTATCTTCTGGTTGAAGA 9479
Query 133581 AGCGTGGTATTCTACCTGGACTGTGTTTTTCTAACGAACTTATTTCAAGGGACGAGGCAC 133640
|| | ||| | | || || || || || || || ||||||| || ||||||| |
Sbjct 9478 AGAGAGGTCTCATGCCAGGTTTGACCTTCTCCAATGAGCTTATTTGCAGAGACGAGGGAT 9419
Query 133641 TTCACACCGAATTTGC 133656
| ||||| || |||||
Sbjct 9418 TACACACTGACTTTGC 9403
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471814488485605
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