Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016575.1_202016-02-08] 165 sequences; 9,355,305 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq2 426 1e-113 seq25 320 1e-81 seq4 185 7e-41 seq19 109 4e-18 seq3 107 1e-17 seq40 93.3 3e-13 >seq2 Length=766927 Score = 426 bits (472), Expect = 1e-113 Identities = 1018/1518 (67%), Gaps = 32/1518 (2%) Strand=Plus/Minus Query 281321 AATTCTTTAGCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAGAATCTTCCGCGATTA 281380 |||| || |||||| || ||||||||| || | || | || |||||||| || Sbjct 262702 AATTTTTCAGCTTCAGAAACCATTCTCTCGATGTCTTCCTTGGACAATCTTCCCTTATCG 262643 Query 281381 TTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAGA 281440 || ||||||||||| || | | || || || ||| | |||| ||||| | | Sbjct 262642 TTGGTAATAGTAATCTTTTGAGTCTTACCGGTACCCTTCTCAACAGCAGATACATTCAAA 262583 Query 281441 ATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGT 281500 ||||| |||||||||| ||| || ||||| ||||||||||| || ||||| ||||||| Sbjct 262582 ATACCGTTGGCATCCATATCGAAGGTGACCTCAATTTGAGGAACACCTCTTGGAGCAGGA 262523 Query 281501 GGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCA 281560 || || || | | ||| | |||| || || || || || ||| ||| Sbjct 262522 GGAATACCAGAAAGTTCAAACTTACCCAACAGGTTGTTGTCCTTGGTTCTAGTTCTCTCA 262463 Query 281561 CCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTG 281620 || || || | ||| || ||| | | ||| || || | ||| || | ||| | | Sbjct 262462 CCTTCAAAGACTTGAATCAAAACACCTGGTTGGTTGTCAGCATATGTCGAAAAGATTTCT 262403 Query 281621 GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCAGCT 281680 || ||||| || ||||| | |||||| || | |||||||| ||||||||||| Sbjct 262402 GACTTTTTGGCTGGGATTGTGGAGTTTCTTGGGATCAGCTTGGTCATGATACCACCAGCG 262343 Query 281681 GTTTCTAAACCAAGAGAAAGAGGAGTGACATCAA-CTAGGACAATATTTTGAAGTTTTTC 281739 ||||| | ||| | ||| ||||||| ||||| | | | |||| | ||| || Sbjct 262342 GTTTCAATACCCAAAGATAGAGGAGCAACATCCAGCAATAACAAG-TCTTGTGTCTTGGA 262284 Query 281740 ATCAGTTTGACCA-ACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCAT 281798 | ||| | ||| |||| |||||||||||| | |||||||||||||||||| ||||| | Sbjct 262283 AGAAGTATCTCCAGACAA-AATAGCTGCTTGGACAGCAGCACCATATGCAACGGCTTCGT 262225 Query 281799 CAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCT-T 281857 | || || | | | ||| | | |||||||||||||| | |||| | || ||| Sbjct 262224 CTGGGTTGATGGACTTGTTTGGCTCCTTACCATTGAAAAAGTCAGAAACTAATT-TCTGA 262166 Query 281858 ACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATCC 281917 ||||| ||||| | | || || ||||| || ||||| ||||| || || ||||| ||| Sbjct 262165 ACCTTTGGAATTCTGGTAGAACCACCAACCAAAACAATCTCATGAACTTGAGATTTGTCC 262106 Query 281918 AGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGTCTGAA 281977 | || || || || ||| | ||||| || || | | ||| |||||||| | | Sbjct 262105 AACTTGGAGTCTTTCAAGACTCTCTCAACAGGCTCGATGGTGGATCTGAACAAGTCGGCA 262046 Query 281978 CAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT-TATAA-TCAATTCCTTCGAACA 282035 || || || |||||| |||||||||| || || | || || || || || ||||||| Sbjct 262045 CAGAGCTCCTCGAATCTAGCTCTAGT--GATCGAGGTGTAGAAGTCGATACCCTCGAACA 261988 Query 282036 AAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCAC 282095 ||||||||| || || | || |||| |||||||| | | | || ||||| |||| Sbjct 261987 AAGAATCAATCTCGATGGAGGTCTGAGCAGAAGAAGACAAAGTTCTCTTTGCACGCTCAC 261928 Query 282096 ATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCAA--ATCTGTTTTATATTT 282153 | || || |||||||||| ||||| | | ||| || | || |||| | || || Sbjct 261927 AAGCGGTTCTTAGTCTTC-TAAGGGATCT-CTGGTTTGTAGAAAGATCTTTCTTGGTCTT 261870 Query 282154 TCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCCAA 282213 ||||||||| || | | | | | || | | ||||| || || ||||| ||||| Sbjct 261869 TCTCTTGAACTCGGCGATAAAGTGGTTGACTAATCTGTTATCGAAGTCCTCACCACCCAA 261810 Query 282214 TTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGT 282273 | || | |||| || || | |||| ||||| || || |||| ||| | |||| Sbjct 261809 GTGGGTGTCACCTGCGGTGGCCTTGACTTCGAAAATACCCTCATCAATAGATAGTAGAGA 261750 Query 282274 AACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGT------C 282327 |||||| ||||| ||||| | ||| || || || | || || || | Sbjct 261749 AACATCGAAAGTTCCTCCACCTAGATCGAAGATTAGAATGTTGTGCTCACCGTGGCCTGC 261690 Query 282328 TTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAA 282387 | || || || | || || |||| || ||||| || || |||||||| ||||| Sbjct 261689 ATCCTTCTTGTCCAACCCGTAAGCAATTGCGGCAGCGGTGGGCTCATTAATGATTCTTTG 261630 Query 282388 AACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAA 282447 ||| || | ||||||||| || ||||| || |||||||||||||| || || || || Sbjct 261629 AACGTTCAAACCAGCAATCAAACCAGCATCCTTGGTGGCTTGTCTTTGAGAGTCATTGAA 261570 Query 282448 ATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATA-AGCGCTTGCTG 282506 || ||||||||||| | ||| ||||| | | || | || | ||| || | || | Sbjct 261569 GTAAGCAGGAACAGTGACAACTGCATCGTTGATTTTCTCACCCAAATACTGCTC-AGCAG 261511 Query 282507 TTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGG--AGAATATTGCTTGGA 282564 | | |||||||| ||| || ||| || ||||| | ||| || ||| | ||| | Sbjct 261510 TATCCTTCATTTTTGTTAGAACCATGGAGGAAATCTCTTCGGGGCTGAAAA--CCTTAGT 261453 Query 282565 TTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGG 282624 ||| | | || |||| | || || || || || |||||||| || || Sbjct 261452 CTCACCCTTAAATTCGACTTGGATATTAGGCTTTCCCCCCTTGTTGATAACTTTGAAAGG 261393 Query 282625 CCAATATTTCATATCTGATTGAACACTTT---GGTCATTAAAATCTCTACCAATTAATCG 282681 | | || ||||| | || | ||| |||| | || | |||||| ||||| || Sbjct 261392 GAAGTGCTTAATATCGGCCTG---AGTTTCCGGGTCGTCGAATTTTCTACCGATTAAACG 261336 Query 282682 TTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCC 282741 ||| ||||| |||| ||| || | |||||| | |||||||| | || || ||||| || Sbjct 261335 TTTGGCATCGAAAACAGTGTTAGCTGGATTCATGGCAGCTTGGTTCTTTGCAGCATCACC 261276 Query 282742 AATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATC 282801 ||||| ||| || || ||||| | || | |||||||| || | |||||||| || Sbjct 261275 AATCAATCTTTCAGTGTCGGTAAAGGCGACGAACGATGGAGTCGTCCTGTTACCTTGGTC 261216 Query 282802 ATTCGCAATAATTTCAAC 282819 || || || || ||||| Sbjct 261215 GTTAGCTATGATCTCAAC 261198 Score = 89.7 bits (98), Expect = 4e-12 Identities = 219/331 (66%), Gaps = 6/331 (2%) Strand=Plus/Minus Query 400268 ACAAAGCAGGAACCAAAGAAGGATATAAATGTACCCTAATTTTGACAGAGGGAGATTCAG 400327 ||||||| || ||||||||||| || |||||||| || ||| | |||||||||||||| | Sbjct 435361 ACAAAGCCGGTACCAAAGAAGGTTACAAATGTACGCTGATTCTCACAGAGGGAGATTCGG 435302 Query 400328 CTAAAACATTCGCTATGTCTGGCCTTAATGTTATTGGAAGAGATTATTATGGAGTTTTCC 400387 | | || ||| | | || | |||| |||| ||||||||||| || || | | Sbjct 435301 CCTCTTCGTTGGCTGTTGCAGGTTTGGCTGTTGTTGGTAGAGATTATTACGGCGTCTATC 435242 Query 400388 CACTTAGAGGAAAACTTTTGAATGTTAGGGATGCTAGTCCTaaaaaaaTTGCCGATAATG 400447 | | ||||| || | | || || || || || ||| | | |||| | |||| Sbjct 435241 CGTTAAGAGGTAAGATGCTTAACGTGAGAGAAGCAAGTGCCGATCAAATCATGAAGAATG 435182 Query 400448 AGGAAATTACAGCAATCaaaaaaaTTGTTGGACTTGA--ACAAGGAAAAGTTTA----TG 400501 |||||| || |||||| ||||| | ||| | | ||||| | || | || || Sbjct 435181 CTGAAATTCAGGCTATCAAACAAATTATGGGATTCCAACACAAGAAGAATTATACTCCTG 435122 Query 400502 ATGATCTCAAAGGTTTACGATATGGTAGTATTATGATTCTTGCTGATCAAGATGTTGATG 400561 | | |||| | | || || ||| || ||||| | ||||||| ||| || | Sbjct 435121 AAAACATCAACTCTCTTCGCTACGGTCACATAATGATCATGACTGATCAGGATCACGACG 435062 Query 400562 GGTACCATATCAAAGGATTAATCATGAATTT 400592 | | |||||| || ||| | || || || || Sbjct 435061 GTTCCCATATTAAGGGACTGATTATAAACTT 435031 Score = 87.8 bits (96), Expect = 1e-11 Identities = 93/120 (78%), Gaps = 2/120 (2%) Strand=Plus/Minus Query 282344 CCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGC- 282402 || || || |||| |||||| || || ||||| |||| ||| ||||| |||||||| | Sbjct 582942 CCGTAAGCCAAAGAAGCAGCGGTGGGCTCATTGATAACTCTTAAAACTTTAAGACCCACT 582883 Query 282403 AATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGT 282462 || || || ||| ||||| ||||||||||| |||||||| || || ||||| ||||| Sbjct 582882 AAATCA-CCAGCAATCTTAGTTGCTTGTCTTTGCGAATCGTTGAAGTAGGCAGGCACAGT 582824 >seq25 Length=164208 Score = 320 bits (354), Expect = 1e-81 Identities = 971/1475 (66%), Gaps = 24/1475 (2%) Strand=Plus/Plus Query 281417 TTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATT 281476 || ||| |||||| || || | |||||||||||||||| || || ||||| || || Sbjct 90753 TTCTCAACGGCAGAGACGTTCAAGATACCATTGGCATCCATGTCGAAAGTGACCTCGATC 90812 Query 281477 TGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTA-TT 281535 ||||| || ||||| |||| || || || || || | || | |||| || | || Sbjct 90813 TGAGGAACACCTCTTGGAGCTGGAGGAATACCAGACAGCTCGAACTTACCCA-ATAAGTT 90871 Query 281536 ATTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATT 281595 || || ||| || ||||||||| | | || || || | | ||| || Sbjct 90872 GTTGTCGGCAGTCTTGGCTCTCTCACCCTCGTATACCTGAATCAACACACCTGGTTGGTT 90931 Query 281596 ATCTGAATAAGTTGTAAATACTCT-GGATTTTTTACAAGGAATTGTTGTGTTTCTATCAA 281654 || | ||||| | || | ||| ||| || || || || || | |||||| | Sbjct 90932 GTCAGCGTAAGTGGAGAA-AGTCTCGGACTTCTTGGTTGGGATGGTAGAGTTTCTTGGGA 90990 Query 281655 TAATATTGGTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAA 281714 | | |||||||| ||||||||||| || || | ||| || || ||||||| || || | Sbjct 90991 TCAGCTTGGTCATGATACCACCAGCAGTCTCAATACCCAGGGACAGAGGAGCAACGTCCA 91050 Query 281715 CTAGGACAATATTTTGAAGTTTTTCA-TCAGTTTGACCAACAAGAATAGCTGCTTGAATA 281773 || | | || ||| || || | ||| | ||| ||||||||| ||||| | | Sbjct 91051 ACAGCAACAAATCTTG-GGTCTTGGAGGAAGTGTCACCGGAAAGAATAGCAGCTTGCACA 91109 Query 281774 GCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTG 281833 || ||||| || |||||||| ||||| || || | || | ||| ||| ||||| ||| Sbjct 91110 GCGGCACCGTAGGCAACAGCCTCATCTGGGTTGATAGATCTGTTTGGTTCCTTACCGTTG 91169 Query 281834 AAAAAATTTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACA 281893 || || | || | | | | ||||| ||||| | | || || ||||| || ||| Sbjct 91170 AAGAAGTCAGACACCAACTTTTGGACCTTTGGAATTCTGGTGGAACCACCAACCAAGACA 91229 Query 281894 ATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCA 281953 || || | || || || || |||| || | ||| ||||| || || || || ||| Sbjct 91230 ATCTCGTTGACTTGGGACTTGTCCAACTTAGCGTCCTTCAAAACCTTCTCCACAGGCTCA 91289 Query 281954 AGACCAGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGT--AAG-AGTG 282010 | || ||| || | || ||| ||||| |||||| | ||||| || ||| |||| Sbjct 91290 ATGGTAGATCTGAATAGATCACCACACAGTTCCTCGAATCTGGCTCTGGTCAAAGAAGTG 91349 Query 282011 ACATTATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAA 282070 | | | |||| ||||| |||||||| || | || || | |||||||| |||||| Sbjct 91350 ---TAAAAGTCAACACCTTCAAACAAAGAGTCGATCTCGATGGAAGTTTGAGCAGAAGAA 91406 Query 282071 GATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCT-TTTGCTGA 282129 || | | | |||||||| ||||| || || || | ||||| || ||| |||| | Sbjct 91407 GACAAAGTTCTCTTAGCACGCTCACAGGCGGTTCTCAATCTTCTCAAAGCTCTTTG--GT 91464 Query 282130 TTG-ATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGAC 282188 ||| | ||| || | || | ||||||||||| || | | | | || | | Sbjct 91465 TTGAAGACAAGTCCTTCTTGTTCTTTCTCTTGAATTCAGCGATGAAGTGGTTGACCAATC 91524 Query 282189 GATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAA 282248 || ||||| || ||||| || || | ||| | || | ||||| | || | ||||| Sbjct 91525 TGTTGTCAAAGTCCTCACCACCTAAGTGAGTGTCACCAGCAGTAGCCTTGACCTCGAAAA 91584 Query 282249 GTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAA 282308 || ||||||| |||| | || |||||| ||||| ||||||| || || || | Sbjct 91585 TACCGTCTTCAATGGACAGCAAAGAAACATCGAAAGTTCCTCCACCCAAGTCGAAGATCA 91644 Query 282309 GTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTG 282368 | || ||| | || || ||||| || | ||| || |||| |||||||| |||| Sbjct 91645 GAACGTTCTTCTCACCCTCAGCTTTTTTGTCCAAACCGTAGGCAATGGCAGCAGCGGTTG 91704 Query 282369 GTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTT 282428 | || || || ||||||| ||| || | ||| ||||| || ||||| |||||||| | Sbjct 91705 GCTCGTTGATGATTCTCATAACGTTCAAACCGGCAATGAGACCAGCATCCTTAGTGGCCT 91764 Query 282429 GTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTC 282488 |||| || || ||||| || || || || ||||| | ||||||||| | || | | | Sbjct 91765 GTCTCTGAGAGTCGTTGAAGTAAGCTGGGACAGTGACAACGGCATCGTTAACCTTGTCAC 91824 Query 282489 CAATATAAGCGCT-TGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCT 282547 ||| || ||| || || | ||||| || | |||| ||| || || || | |||| Sbjct 91825 CAA-GGAATTGCTCAGCAGTGTCCTTCATCTTGGTCAAAACCATGGAAGAGATCTCTTCT 91883 Query 282548 GGAGAATATTGCTTGGATTCA-TTTTGATATGATACTTCAAAATATGGTTTATTACCAAC 282606 |||| | ||| | ||| ||||| || |||| || | ||| || ||| Sbjct 91884 GGAGTGAAGACCTTAGTCTCACCTTTGA-ATTCAACTTGAATGTTTGGCTTTCCACCCTT 91942 Query 282607 ATTAATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTG-GTCATTAAAAT 282665 | || || || ||||| | | || ||||| | ||| || | || || | Sbjct 91943 GTCAACGACCTTGAATGGGAAGTGCTTGATATCAGCTTG-GGTCTCAGCATCTGAGAACT 92001 Query 282666 CTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGAT 282725 |||||| || || || || || || |||| || |||| ||| || | |||||||| | Sbjct 92002 TTCTACCGATCAAACGCTTGGCGTCGAAAACGGTGTTGGCTGGGTTCATAGCAGCTTGGT 92061 Query 282726 ATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTG 282785 || || || || |||||||| || || || || || | || ||||||| || | Sbjct 92062 TCTTAGCAGCGTCACCAATCAGTCTCTCGGTGTCAGTGAAAGCGACGAATGATGGGGTAG 92121 Query 282786 TGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATA-CACCTACA 282844 | | ||||| || ||||| ||||| || ||||| | || || || | | | ||| Sbjct 92122 TTCTGTTACCCTGGTCATTTGCAATGATCTCAACACGATCA-TTGGCGAAATGTGCCACA 92180 Query 282845 CAACTAAAAGTTGTTCCTAAATCAATACCAATAGC 282879 || | || ||||||||||||||||| | ||| Sbjct 92181 CATGAGTATGTAGTTCCTAAATCAATACCGACAGC 92215 >seq4 Length=372207 Score = 185 bits (204), Expect = 7e-41 Identities = 699/1082 (65%), Gaps = 35/1082 (3%) Strand=Plus/Minus Query 281758 AATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATT 281817 |||||| |||||| || ||||| || || ||||| |||||||| || | | || | Sbjct 308861 AATAGCACCTTGAACGGCGGCACCGTAAGCGACAGCCTCATCAGGGTTGATGGATTTCTC 308802 Query 281818 TAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGA 281877 | || ||||||| ||| || | || | || | | ||||| ||||| | | || Sbjct 308801 CAATTGCTTACCATCGAAGAAGTCAGACAACAGCTTTTGGACCTTTGGAATTCTGGTGGA 308742 Query 281878 TCCTCCAACTAATACAATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAAC 281937 || ||||| || || | |||| |||| ||||| || | ||||| ||| ||||| Sbjct 308741 ACCACCAACCAAGACGACGTCATCGACCTTGGATTTCTCGATCTTTGAGTCCTTCAAAAC 308682 Query 281938 TTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGC 281997 || |||||| || || | | || | ||||| || | | | ||||||||||| Sbjct 308681 TTGTTCAACAGGCTCCAAAGTAGACTTGAACAAATCAGCGTTGATAGCCTCGAATTTAGC 308622 Query 281998 TCTAG-----TAAG-AGTGACATTATAATCAATTCCTTCGAACAAAGAATCAACTTCAAT 282051 ||| | | || ||||| | | | ||| || |||||||| || || ||||||| Sbjct 308621 TCTGGAGATTTCAGCAGTGA-AGTCT--TCA---CCATCGAACAAGGAGTCGACTTCAAC 308568 Query 282052 CGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCT 282111 ||| || |||| |||||| | | | |||||||| ||||| || || || | ||| Sbjct 308567 CGTGGTCTGAGCAACAGAAGACAAAGTTCTCTTAGCACGCTCACAAGCAGTTCTCAATCT 308508 Query 282112 TCGTAAGGCTTTTGCTGATTGATTCAAATCTGT-TTTA--TATTTTCTCTTGAAAT--CT 282166 || |||||| | || || | || | ||| ||| | |||| || ||| || Sbjct 308507 TCTCAAGGCTCTGGC--ATCG--TCGGAGATGTCCTTACCGGTCTTCTTCTGGAATTCCT 308452 Query 282167 TC----AACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATT 282222 || | || ||| ||||| | | ||||| || | ||| ||||| | || | Sbjct 308451 TCTTGAAGAACTCCA----ACAAGTTG-GTGTCAAAGTCCTGACCACCCAAGTGGGTGTC 308397 Query 282223 TCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATG 282282 || | || || | || ||| | ||| | ||| ||| || | |||||| Sbjct 308396 ACCAGCAGTGGCCTTAACAGTGAAGACACCACCAGCAATGTGCAACAGGGAAACATCGAA 308337 Query 282283 GGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTT---TTTATC 282339 ||||| ||||||| ||| ||||| | || | | | || | || || | | Sbjct 308336 AGTTCCTCCACCCAAATCGAAAATCAAAACGTGCTTCTCCTCCTCAGACTTACCAGCACC 308277 Query 282340 AAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACC 282399 |||||| || |||| || || ||||| ||||| || || || | |||||| || ||||| Sbjct 308276 AAGACCGTAAGCAATGGCGGCGGCAGTAGGTTCGTTGATGATACGCAAAACGTTCAGACC 308217 Query 282400 AGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAAC 282459 || ||| || || |||||||| ||||||||||| | |||||| || || || || || Sbjct 308216 AGAAATGGCACCAGCGTCTTTAGTAGCTTGTCTTTGAGCATCGTTGAAGTAAGCTGGGAC 308157 Query 282460 AGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTT 282519 || | ||| || | || | || || || | ||| || | ||||| || Sbjct 308156 GGTGACAACAGCCTTCTCGACCTTTTGACCGATCTTAGCCTCAGCGACCTCCTTCATCTT 308097 Query 282520 ACTTAAAATCATTGATGAAATTTGTTCTGGAGAATATTGCTTGGATTCATTTTGATATGA 282579 | |||| ||| || ||||||| | ||||| ||||||||| ||| || Sbjct 308096 GGTCAAAACCATGGACGAAATTTCCTGAGGAGAGAATTGCTTGGTCTCACCCAAGTACTC 308037 Query 282580 TACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGCCAATATTTCATATC 282639 || |||| |||| ||| | || | ||| || ||||||||| | || || || Sbjct 308036 AACCTCAATCAATGGGTTACCGTTGTCGTTGACAACCTTGAATGGCCAAGACTTGATGTC 307977 Query 282640 TGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGT 282699 ||| ||| | ||||| ||| |||||||||| || || || || ||||||| ||| Sbjct 307976 CTTTTGGACAGACTCGTCATCAAAGGCTCTACCAATCAAACGCTTAGCGTCAAAAACAGT 307917 Query 282700 ATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGT-TCTGTCT 282758 || |||| || | |||||||| | || || || || ||||||| || | ||| Sbjct 307916 GTTCTTTGGGTTTAAAGCAGCTTGGTTCTTAGCAGCGTCACCAATCA-ATCTCTCTTCAG 307858 Query 282759 CTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAA 282818 || || | ||| | || ||||| || |||||||| || || ||||| || || | Sbjct 307857 GAGTGAAAGCAACGAAGGAAGGAGTAACACGGTTACCTTGCTCGTTGGCAATGATCTCCA 307798 Query 282819 CT 282820 || Sbjct 307797 CT 307796 >seq19 Length=629025 Score = 109 bits (120), Expect = 4e-18 Identities = 164/228 (72%), Gaps = 4/228 (2%) Strand=Plus/Plus Query 164593 TTTACAGGACTGTTTGGGAAATTCCTCAAAAATCCATCATTGAAATGGCAGCTGATAGAG 164652 |||||| ||||||||||| || |||||| | | || | ||||| || ||||||| Sbjct 589194 TTTACAAAACTGTTTGGGAGATCTCTCAAAGAATTACTATAAACATGGCTGCAGATAGAG 589253 Query 164653 CACCTTTTGTTGATCAAACACAGAGTATGAATTTGTACATTGATAAACCTAGT-TTTGCA 164711 | || |||||||| | ||||||||||||||||| | | |||||| | | | | Sbjct 589254 GCCGATTCATTGATCAATCTCAGAGTATGAATTTGTATCTGGCTAAACCAAATAGAGGGA 589313 Query 164712 AGATTAAATTCTTGTCTATTTTATGCATGGAGGAAAGGTCTCAAAACCGGTATGTATTAT 164771 || ||| | || | |||||||| |||| |||||| | || || || ||||| || Sbjct 589314 AGCTTACAGCAATG-CACTTTTATGCCTGGAAAAAAGGTTTAAAGACGGGGATGTACTAC 589372 Query 164772 TTGAGATCTAAACCAGCTTCTTCCGCCAATCAA-TTCGGAATTGACAT 164818 || ||| ||||| |||||||||| ||| ||||| || |||||| || Sbjct 589373 TTAAGAACTAAAGCAGCTTCTTCTGCC-ATCAAGTTTTCAATTGATAT 589419 >seq3 Length=116891 Score = 107 bits (118), Expect = 1e-17 Identities = 166/237 (70%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 432279 AGATTGAGAGGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGATATG 432338 ||||||| ||||||||||| ||| | ||||| ||| | |||||||||||||| || | Sbjct 112753 AGATTGAAGGGTAAAGAAGGACGTTTGAGAGGTAATCTTATGGGAAAGCGTGTTGACTTT 112812 Query 432339 TCTGCACGTACAGTTATTACTTCTGATCCTAATATTGCTCTCAATGAAGTTGGTGTTCCT 432398 || |||||||| |||||| | ||| |||||| | | | | |||||||||| || Sbjct 112813 TCAGCACGTACTGTTATTTCCGGTGACCCTAATTTGGAGTTGGACCAAGTTGGTGTACCC 112872 Query 432399 CTCATTATTGCGAAAAATCTTACTTTTGACGAAATTGTAACAGAACATAATATTGATTAT 432458 | | |||||| |||| |||| | | || | || ||| || | |||||| || Sbjct 112873 ATTAGTATTGCCAAAACTCTTTCCTACCCAGAGACAGTCACACAATACAATATTCATAGG 112932 Query 432459 TTGACTCAATTAGTGAAAAATGGTAAAAGAGTATATCCAGGTGCCAATTTTGTAATC 432515 |||||| ||| || ||||| | | | ||||||||||||| | ||| ||| Sbjct 112933 TTGACTGAATACGTTCGTAATGGGCCGAACGAACATCCAGGTGCCAAATATGTTATC 112989 Score = 93.3 bits (102), Expect = 3e-13 Identities = 136/190 (72%), Gaps = 2/190 (1%) Strand=Plus/Plus Query 435133 GAATTTTTCTTCCAAGTAATGGCTGGTCGTGAAGGTATTATTAATACAGCTATTAAAACT 435192 || || ||||| || | |||||||||||||||||| | ||| |||||||| | |||||| Sbjct 114205 GAGTTCTTCTTTCACGCCATGGCTGGTCGTGAAGGTTTGATTGATACAGCTGTGAAAACT 114264 Query 435193 GCTGATACTGGTTATATTCAAAGAAAACTTGTCAAGATGCTTGAAGATATTAAACAAGAA 435252 ||||| || ||||||||||| | | || ||| || || ||||| | | Sbjct 114265 GCTGAAACAGGTTATATTCAGCGTCGTTTAGTGAAGGCACTAGAGGATATAATGGTTCAC 114324 Query 435253 TATGATGGTACAGTGAGAAATGCAAATGGTAAACTTATATCA-TGTGTTTATGGTGATAA 435311 ||||||||||| |||||| || ||| | |||| ||| | | |||||||||| | Sbjct 114325 TATGATGGTACTACGAGAAACTCACTAGGTGACATTAT-TCAGTTTCTTTATGGTGAAGA 114383 Query 435312 TGGTATTAAT 435321 |||| || || Sbjct 114384 TGGTCTTGAT 114393 >seq40 Length=318577 Score = 93.3 bits (102), Expect = 3e-13 Identities = 293/449 (65%), Gaps = 14/449 (3%) Strand=Plus/Plus Query 281363 GAGAATCTTCCGCGATTATTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCA 281422 || ||||| || |||| ||| | || || || || |||||| ||| ||||| Sbjct 263950 GACAATCTACCACGATCATTGTTGATGGTGATGGACTCGGATTTTCCAGTTCCCTTATCG 264009 Query 281423 GCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGG 281482 | ||||| || || | ||| || || || || ||| |||| || || |||| |||||| Sbjct 264010 GTGGCAGAGACCTTCAAAATTCCGTTAGCGTCTAAAACAAAAGTAACCTCAACTTGAGGA 264069 Query 281483 ACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCT 281542 ||||| |||| ||||| || || || | ||| | || || || || || Sbjct 264070 GTACCTCTTGGAGCTGGTGGAATACCAGTCAGCTCGAATTTACCAAGCAAGTTGTTGTCC 264129 Query 281543 TTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTT---TGATTATCT 281599 |||| || || |||||||| ||| ||| || ||| |||||| || || || Sbjct 264130 TTAGCCAAGGCTCTCTCACCCTCATAAACTTGAATC--AAC-ACAGTTGGCTGGTTGTCA 264186 Query 281600 GAATAAGTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATA 281659 | | ||| | || | | ||||| ||| || || | |||||||| | || | Sbjct 264187 GCAGCAGTGGAGAAAATTTGAGATTTCTTAGTTGGGATAGCAGTGTTTCTGTTGATTAAG 264246 Query 281660 TTGGTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGG 281719 | ||||||| ||||||| || || | ||| |||| || || | ||||||| | | Sbjct 264247 GTAGTCATAACGCCACCAGTAGTCTCGATACCCAGAGTTAGGGGGTTCACATCAAGCAAG 264306 Query 281720 ACAATATTTTGAAGTTTTTCATCAGTTTGACCA-ACAAGAATAGCTGCTTGAATAGCAGC 281778 || || | | | ||| ||| ||| |||| || | | || |||| |||||| Sbjct 264307 ACGATGTCATCGACACCTTCCTCA------CCAGACAA-AACACCAGCCTGAACAGCAGC 264359 Query 281779 ACCATATGCAACAGCTTCATCAGGATTAA 281807 ||| ||||| ||||||||||| || |||| Sbjct 264360 ACCGTATGCGACAGCTTCATCTGGGTTAA 264388 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740622299197290