Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016575.1_202016-02-08] 165 sequences; 9,355,305 total letters Query= NC_028683.1 Length=177643 Score E Sequences producing significant alignments: (Bits) Value seq33 105 8e-18 >seq33 Length=584130 Score = 105 bits (116), Expect = 8e-18 Identities = 139/191 (73%), Gaps = 5/191 (3%) Strand=Plus/Plus Query 139399 TTTATGTCAAATGAGCCATTCAATTCTGGGTCGTTAATGAAACCTTTCCAACCTACAGTT 139458 || || | ||| || |||| | |||||||| || || | |||||||||||| ||||| Sbjct 211844 TTGATTTGAAACGAACCATCGATGTCTGGGTCATTTATCAGACCTTTCCAACCAACAGTG 211903 Query 139459 GTTCTTGGTTTCTCAAAATAAACACGCATAACCAAAAGAAGAT----TTGGAAATTGTTT 139514 |||||||||||||| |||||| | | ||| | | | |||| | || || | | | Sbjct 211904 GTTCTTGGTTTCTCCAAATAAGCTCTCATTATGATATGAAGCTCACCTTTGATAGTCTCG 211963 Query 139515 TTGTACTTCGGCTAAACGTTCGCCGTATTCGAGAGCAGCTTTAGGGTCATGAATTGAACA 139574 || |||| |||||| | |||| ||| || | ||| || ||||| ||||| || ||||| Sbjct 211964 TTAAACTT-GGCTAATCTCTCGCAGTAGTCTAAAGCTGCCTTAGGATCATGGATGGAACA 212022 Query 139575 AGGGCCTACAA 139585 ||| || |||| Sbjct 212023 AGGTCCGACAA 212033 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 568328427820200