Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016575.1_202016-02-08] 165 sequences; 9,355,305 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq36 385 7e-102 seq31 188 1e-42 >seq36 Length=393897 Score = 385 bits (426), Expect = 7e-102 Identities = 1233/1893 (65%), Gaps = 50/1893 (3%) Strand=Plus/Plus Query 75373 CAAC-GTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATACCAGTTT 75431 |||| || |||||||||| || | || | || ||||| || |||||||||||||| | Sbjct 87815 CAACTGTAAACTGAATGGCAGCAGCGGCAGCTTGAGTACGCAGGTAGTACATACCAGTCT 87874 Query 75432 TTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGG 75491 ||| || |||| || || || ||||| || || | ||| | | ||| | Sbjct 87875 TTAATCCTTTCTTCCAACCATAAAAGTGCATACTGGTCAATTTACCCATAGTTGGAGCCA 87934 Query 75492 CTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTT 75551 | ||||| |||| ||||||| ||||||||| | ||| |||||| || ||||| | Sbjct 87935 TCAGGTGAATGTTCAACGACTGAGATTGATCGATATAGGCTGATCTATCGGCAGCCATAT 87994 Query 75552 TTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTG 75611 ||||| |||||||||| ||| ||||||| ||| ||| ||| ||| | | || | Sbjct 87995 CAATAATAGTCTTTTGAGAAATCTCCCAAACAGTCTTGTAAAGGCCTTTAAGTTGCTCAG 88054 Query 75612 GAAGATTTGT---ATTTTGAATGGATCCGCCATCAGATATAATTGTATTCTTGATCTCAT 75668 | | || | ||||||||| || ||| || || || || ||| || || | || Sbjct 88055 GTATGTTGGGCAAATTTTGAATAGAGCCGTTGTCTGAAATGATATGATTTTTCATGTTAT 88114 Query 75669 CATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAATTTGAAATT 75728 | | ||| | || || | | | | | | |||||||||||||||||||| Sbjct 88115 CGTCCCAAAGACCCAAATCCACTAGATCACGCAATAAGTAAGGATTAACAATTTGAAATT 88174 Query 75729 CTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGT 75788 |||||| ||||| | || | ||| || || || || ||||| | | | || |||| Sbjct 88175 CTCCAGCTAATACACGGCGTGAGTAGATGTTGGAAGTGTAAGGTTCGAAACACTCGTTGT 88234 Query 75789 TTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTGA 75848 |||| |||||| | |||||||||||| ||||||||||| || | || ||||| | Sbjct 88235 AACCCAGAATTTGGGAAGTTGAAGCAGTGGGCATAGGTGCAACTAGCAACGAGTTTCTTA 88294 Query 75849 GACCATGTGTTCTGATT-TTATCTTTTAGATATTTCCAATCCCAAAGATCTGATGGTACA 75907 ||| |||| | | || |||| || ||| ||| ||||| || || || || Sbjct 88295 AACC-TGTGGAAACAATCTTGGCTTTGAGTGATTCCCATTCCCACAGCTCAGAGGGCTTC 88353 Query 75908 ACATCCCAGAGATCGTATTGTAGAATTCCGT----TGCTAGCATATGATCCATTATATGT 75963 ||||| | || ||||| | ||| || | |||| | || || | | || Sbjct 88354 TTGTCCCACAAGTCATATTGCAAAATGCCCTGAGATGCTGGA----GAACCTTGGAAGGT 88409 Query 75964 TTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCGTAATAAAT 76023 |||||| | || || | | |||| |||| || || || || | | || || Sbjct 88410 TTCGTAGGCTCCTTCTTCGACGGCTAATTCGTTGGAGGCTTCCAAAGCTGCATGGTAGAT 88469 Query 76024 TGTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAGGATAATGTAA 76083 ||||| ||||||| ||||||| | || ||||| || |||||||||| | | | | Sbjct 88470 AGTTTCAAAAATCTGAATATTAAGCTGTTTGGCTTCTGGAGAATCAAAAGGA-ATTCTCA 88528 Query 76084 AAGA-ATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTAT 76142 | ||||| ||||| |||| || ||||| || | | | |||||||||| | | ||| Sbjct 88529 ACTTCATAAAAGCATCAGCTAAACCTTGAACACCCACAGCTATAGGTCTATTACGCATAT 88588 Query 76143 TGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATTTC 76202 | || | ||||||||||| |||||| |||| | || |||||| | || | || | Sbjct 88589 TCGATCTCCTAGCTTCTGGAACGGGGTAAAAATTTCTGTCGATAATTCTGTTCAAGTTAC 88648 Query 76203 TGACAACTACTTTAACCACGTCCTTTAGTTTGAGAAAAT-----CAA-ATT---TTCCAT 76253 ||| ||||| | || | || || ||| | || | | | ||| Sbjct 88649 GAGTAACCACTTTGGTGATTTCATGCAGCTTTTCAAAGTTGTACCAGCAGTGAGTATCAT 88708 Query 76254 C--TATCA-CAAACATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAG 76310 | | ||| |||| |||||| ||||| || | ||||| || || ||| | | Sbjct 88709 CGGTTTCAACAAAGGCTGGAAGAGCAATAGAAGCCAAGTTACAGACAGCAGTCTCTTCCG 88768 Query 76311 CATTGGCATATTGTATTATCTCCGTGCATAGATTACTACACTTGAT-AGTTCCAAGATTT 76369 | |||| | || || ||| || ||| | || || | ||||| | | Sbjct 88769 GGGAAGAGTATTCAACAATTTCACAGCAAAGGTTAGAGGATTTAATGACACCCAAGTTCT 88828 Query 76370 TGTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCA 76429 | | |||| | ||||||||||| | |||||||| || | || ||||| |||||||| Sbjct 88829 TCT-GGTTAGTTTTTTTGTTACAAGCATCCTTATACAGCATGAATGGAGTACCAGTTTCT 88887 Query 76430 ATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTTATTATAGATTTGTAT--- 76486 | |||| || | || | | ||| | | ||||| || | ||||| | Sbjct 88888 GTTTGTGCCTCAAGGATGGCGTACCAAAGCTTTTGGGCTTTGAT----GGTTTGTCTTCC 88943 Query 76487 -CG--CTTCTCTCTTTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCA 76543 || |||| || |||| ||| | || || |||||||||||||| | || || Sbjct 88944 ACGACCTTC-CT-TTTCGTATCTTTCGTACAATTCCTCAAATTCATCTCCATAGACGTCG 89001 Query 76544 TCCAAACCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGT 76603 | | |||||| |||| | ||| | | || | ||| || |||| | | || | | Sbjct 89002 GCAAGGCCAGGAGCTTCACTTGGAGAGAACAGGGTCCAATCGCCATTCTGTTCTACTCTT 89061 Query 76604 TTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCA 76663 ||||| || |||||||| ||||| | ||| |||| |||| | ||| || || Sbjct 89062 TTCATGAACAGATCAGGGATCCACAAAGCGGGGAATAAGTCTCTAGCTCTGATCTCCTCT 89121 Query 76664 TTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGA 76723 || || ||||| || ||| | ||| | | || || | ||||||||| || | Sbjct 89122 TTACCATGGTTCTTACGAATATCAATGAAGGCAAAGATGTCGGCATGCCATGGCTCCAAG 89181 Query 76724 TATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTA 76783 || | || | |||| || ||||| ||||| || || || | ||| | |||||||| Sbjct 89182 TACAAAGCAAATGCACCAGGACGTTTGTTACCACCTTGGTCAACATAACGAGCAGTGTTG 89241 Query 76784 TTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAA 76843 || | || |||| |||||||||||| || || || ||||| || || |||| ||| || Sbjct 89242 TTGAAGACCCTCACCATTGGAATAATACCATTCGAAGTACCGTTAGTACCAGCAATGTAG 89301 Query 76844 CTTCCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATT 76903 ||| |||||||||||| ||| | || ||||| || || |||| |||||| Sbjct 89302 GATCCTGTGGCACGAATATTATGAATGTGCAAACCAATTCCACCAGCAGTTTTGGAGATT 89361 Query 76904 AGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGA 76963 | |||||| ||||| || || || ||||| || || |||||| |||| || Sbjct 89362 AAAGCACATTCCTTCAAAGTATCGTAAATGCCTTCAATTGAGTCATCCCGCATGGCAACT 89421 Query 76964 AGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCA 77023 | ||||| |||||||| | ||| || || || ||||||| |||||||| ||| Sbjct 89422 AAGAAACATGATGACATTTGTGGGTGAGGGGTACCAGCGTTAAACAGAGTAGGAGAGGCA 89481 Query 77024 TGAGTGAACCATTT----TTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATC 77079 |||||||| | || ||| |||| || || |||||||||||| | | || || Sbjct 89482 TGAGTGAAATACTTCTGACTCATAAAG----TTATAAGTTTCAATAACTCTTGCAATGTC 89537 Query 77080 CCATTGATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTT 77139 |||||| || | ||| |||||||| | || || ||||| |||||| || || Sbjct 89538 ATCACCATGAATGCCGATAGCAACACGCATAATCAAGTGTTGAGGACGTTCTGCAACATT 89597 Query 77140 ATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGA 77199 | ||| ||| ||| | ||| ||| ||||||| || || || ||||| ||||| || Sbjct 89598 ACCATTAATTCTCAGAAGGTAAGATCTTTCCAAGGTCTTGAATCCAAAGTAGTTATACTG 89657 Query 77200 AAAGTCTCTTTCGTAAATAATAACCGAATTTAG 77232 ||||||||| ||||| | |||| | || || || Sbjct 89658 AAAGTCTCTATCGTAGACAATAGCAGAGTTCAG 89690 >seq31 Length=329313 Score = 188 bits (208), Expect = 1e-42 Identities = 560/855 (65%), Gaps = 14/855 (2%) Strand=Plus/Plus Query 46339 TTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 46398 |||||||| ||| || | || ||||| || || ||||| || |||| || || || Sbjct 9109 TTTTGGTAATCAGAAACTCTCTTTTCGAAGAAGTTGGTTTTACCGGCCAAAGAAATGTTC 9168 Query 46399 TCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAAATC 46458 ||||| || ||||| ||||| | || || || | ||||| || | || | Sbjct 9169 TCCATGAAGTCAAATGGATTGTTGACGTTGTACACCTTTTTGTTGCCCAGAGCTACCAGT 9228 Query 46459 AGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGT 46518 ||||| || |||||||| || | |||| ||||| || ||||| || | | Sbjct 9229 AGTCTGTCAGCAACGAACTCAACATACTGGCACATCAAGCTGCAGTTCATCCCCAGTAAG 9288 Query 46519 TTGACCGGTAGAGCCTCCGT-AAGAAACTCTTGTTCAATAGTGACAGCATCCGATATTAT 46577 ||| || ||||| || || ||| | || || ||| || |||||| || | || || Sbjct 9289 GAGACAGGAAGAGCGTCTGTGAAGTACCTTTT-TTCGATCTCGACAGCCTCTGTGATAAT 9347 Query 46578 CGATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAACATGCAAA 46637 | | || |||||||||| | | || | ||||| ||| | || || ||||| Sbjct 9348 CTTTTCAACGATTTCCTCACTGGCTCTATTGTTTAAATGAGAAAATAGCAAGCAAGCAAA 9407 Query 46638 ATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCAT 46697 ||| || | || || ||||| | ||| | || || || || || | || ||||| Sbjct 9408 GTCAGTGTGTAATCCCTCGTCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCTGGCAT 9467 Query 46698 TAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTC 46757 || || | ||| || | ||| || |||| || |||||||| |||||||| || || || Sbjct 9468 GAGACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAAGATCCTGAAAAGAAGATACCCTC 9527 Query 46758 TACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTATGA---ATCCACCT 46814 ||||| ||||| || || | | || || | ||||| | || | ||||| || Sbjct 9528 AACAGCAGCGAAGGCAACCAAACGTTCAGCGAACAATGCATCGTCATCAGAAATCCATCT 9587 Query 46815 TTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAA 46874 ||||| |||||||||| || | ||| || || || || || ||||| || || || Sbjct 9588 CATGGCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTCGATGGCATTGAACAGGAA 9647 Query 46875 GtttttttCATCACTATCTTTAACATATGTATCTATTA--AAAGACTATACATTTCTGAA 46932 | || | |||||| | || ||||| || | || || || | || || Sbjct 9648 TTCAGACTCTTTTGGATCTTTGATGTAAGTATCAATCAGCAAGGAGTAAG--TCTCGGAG 9705 Query 46933 TGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACC 46992 |||||||| || || ||||| || |||||||| ||| ||||||| | || || ||| Sbjct 9706 TGAATGTTCTCCATCATGATCTGGAAACCGTAAAAGCATTTTGCTTCGGGAAGTTGAACC 9765 Query 46993 TCTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAAT 47052 || | || || ||| ||| || ||||| || || || ||| |||||||| || Sbjct 9766 TCAGCACTGAAATTTTCCACCAAGTTTTCATTGACAATACCGTCAGAGGCAGCAAAGAAG 9825 Query 47053 GCCAATACATGTTTA-ATAAAATATTTTTCAT---CGGTAGTCAGTTTATTCCAGTCATT 47108 || | || | | | || || ||||||||| || | | | ||||||||||||| Sbjct 9826 GCAAGGAC-TCTCGAGATGAAGAATTTTTCATTATCGTTCATACGATTATTCCAGTCATG 9884 Query 47109 GATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATA 47168 | ||| || | |||| ||| ||||| ||||| || || || || || | || || Sbjct 9885 CAAATCCTTACCCAGGTCTATTTCCTCAGCAGTCCAAAAGGAAGCTTCGGCCTGCTTGTA 9944 Query 47169 CATATTCCATATATC 47183 ||| | ||| ||||| Sbjct 9945 CATTTGCCAGATATC 9959 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712932929572800