Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016585.1_202016-02-08]
196 sequences; 9,355,338 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq33 336 3e-87
seq28 158 1e-33
>seq33
Length=271133
Score = 336 bits (372), Expect = 3e-87
Identities = 1320/2073 (64%), Gaps = 37/2073 (2%)
Strand=Plus/Minus
Query 52797 CCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTC 52856
||||||| | ||| || ||||||| ||| | || | || ||||| || |||||||| |
Sbjct 183323 CCTTGTCAACTGTAAACTGAATGGCAGCAGCGGCAGCTTGAGTACGCAGGTAGTACATAC 183264
Query 52857 CCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCG 52916
| || |||| || |||| || ||||| |||||||| || | ||| | | |
Sbjct 183263 CAGTCTTTAATCCTTTCTTCCAACCATAAAAGTGCATACTGGTCAATTTACCCATAGTTG 183204
Query 52917 GATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAG 52976
|| | | || || |||| || ||| ||||||||| ||||| || || ||||
Sbjct 183203 GAGCCATCAGGTGAATGTTCAACGACTGAGATTGATCGATATAGGCTGATCTATCGGCAG 183144
Query 52977 CCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATAT 53036
|||| | || || |||||||| | ||| ||||||| ||| || |||| | |||| |
Sbjct 183143 CCATATCAATAATAGTCTTTTGAGAAATCTCCCAAACAGTCTTGTAAAGGCCTTTAAGTT 183084
Query 53037 CTTCTGGAAGGTTTGT---ATTCTGAATAGATCCACCATCTACCATAATCCTATTCTTGA 53093
|| || | ||| | ||| |||||||| || ||| || || ||| || |
Sbjct 183083 GCTCAGGTATGTTGGGCAAATTTTGAATAGAGCCGTTGTCTGAAATGATATGATTTTTCA 183024
Query 53094 TCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTT 53153
| | ||| | ||| | || || | | | | | | |||||||| | ||
Sbjct 183023 TGTTATCGTCCCAAAGACCCAAATCCACTAGATCACGCAATAAGTAAGGATTAACAATTT 182964
Query 53154 GAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACT 53213
|||||||||||| ||||| | || | ||| || || || || ||||| | | |||
Sbjct 182963 GAAATTCTCCAGCTAATACACGGCGTGAGTAGATGTTGGAAGTGTAAGGTTCGAAACACT 182904
Query 53214 CATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTAT 53273
| || | |||| |||||| | |||||| ||||| ||||||||||| || | || |
Sbjct 182903 CGTTGTAACCCAGAATTTGGGAAGTTGAAGCAGTGGGCATAGGTGCAACTAGCAACGAGT 182844
Query 53274 TTCTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACG 53333
|||| | ||| | || || |||| || | |||||| | ||| || || || |
Sbjct 182843 TTCTTAAACCTGTGGAAACAATCTTGGCTTTGAGTGATTCCCATTCCCACAGCTCAGAGG 182784
Query 53334 GTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATG 53393
| ||| | ||| || | | || || ||| | |
Sbjct 182783 GCTTCTTGTCCCACAAGTCATATTGCAAAATGCCCTGAGATGCTGGAGAACCTTGGAAGG 182724
Query 53394 TATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAA 53453
| ||||| | |||||| | | |||| ||| || || || || | | || |
Sbjct 182723 TTTCGTAGGCTCCTTCTTCGACGGCTAATTCGTTGGAGGCTTCCAAAGCTGCATGGTAGA 182664
Query 53454 TGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTA 53513
| ||||| || |||| |||| || | || ||||| | |||||| ||| | |
Sbjct 182663 TAGTTTCAAAAATCTGAATATTAAGCTGTTTGGCTTCTGGAGAATCAAAAGGAATTCTCA 182604
Query 53514 AGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTAT 53573
| ||||| || || ||||| ||||||||||| | | | |||||||||| | | |||
Sbjct 182603 ACTTCATAAAAGCATCAGCTAAACCTTGAACACCCACAGCTATAGGTCTATTACGCATAT 182544
Query 53574 TAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGGTTTC 53633
| || | ||||||||||| || ||| |||| | || |||||| | || | ||| |
Sbjct 182543 TCGATCTCCTAGCTTCTGGAACGGGGTAAAAATTTCTGTCGATAATTCTGTTCAAGTTAC 182484
Query 53634 TGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAAT--------CAAATTGTC-CAT 53684
|| |||||| | || | ||| || ||| | || || |||
Sbjct 182483 GAGTAACCACTTTGGTGATTTCATGCAGCTTTTCAAAGTTGTACCAGCAGTGAGTATCAT 182424
Query 53685 CTATTACAAACATG--TTCAAT-GCAATAGATGCCAGATTACAAACGGCTACCTCATTAG 53741
| || ||| | | | || |||||||| |||| ||||| || || ||| | |
Sbjct 182423 CGGTTTCAACAAAGGCTGGAAGAGCAATAGAAGCCAAGTTACAGACAGCAGTCTCTTCCG 182364
Query 53742 CATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTT 53801
| |||| | || ||| |||||| ||| | || ||| || || || |
Sbjct 182363 GGGAAGAGTATTCAACAATTTCACAGCAAAGGTTAGAGGATTTAATGACACCCAAGTTCT 182304
Query 53802 GTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAA 53861
|| ||| | ||||||||||| ||||||||||| || |||||||| |||||||||||
Sbjct 182303 TCTGGTTAGTTTTTTTGTTACAAGCATCCTTATACAGCATGAATGGAGTACCAGTTTCTG 182244
Query 53862 TCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGATTTGTATCTCT 53921
| || | || | || || | ||| | | || || || | ||||| | |
Sbjct 182243 TTTGTGCCTCAAGGATGGCGTACCAAAGCTTTTGGGCTTTGAT----GGTTTGTCTTCCA 182188
Query 53922 T----TTCTCTTTCGTATAGTGTATACAATCGTTCAAACTCGTCTCCCCAAACATTGTCC 53977
||| |||||||| | |||||| ||||| || ||||| | || | | |
Sbjct 182187 CGACCTTCCTTTTCGTATCTTTCGTACAATTCCTCAAATTCATCTCCATAGACGTCGGCA 182128
Query 53978 AATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTC 54037
| |||||| |||| ||| | | || | ||| || || | | | |||| ||||
Sbjct 182127 AGGCCAGGAGCTTCACTTGGAGAGAACAGGGTCCAATCGCCATTCTGTTCTACTCTTTTC 182068
Query 54038 ATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTT 54097
|| || |||||||| ||||| | ||| |||| ||||| | ||| ||||| ||
Sbjct 182067 ATGAACAGATCAGGGATCCACAAAGCGGGGAATAAGTCTCTAGCTCTGATCTCCTCTTTA 182008
Query 54098 CCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTAT 54157
|| ||||| || ||| | ||| || | || || | |||||| || ||||||||
Sbjct 182007 CCATGGTTCTTACGAATATCAATGAAGGCAAAGATGTCGGCATGCCATGGCTCCAAGTAC 181948
Query 54158 ATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTA 54217
| | | | ||||| |||||||| || || || || | || | ||| ||||| ||
Sbjct 181947 AAAGCAAATGCACCAGGACGTTTGTTACCACCTTGGTCAACATAACGAGCAGTGTTGTTG 181888
Query 54218 TAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTT 54277
| || |||| |||||||||||||||||| || | ||| || || || | || ||| |
Sbjct 181887 AAGACCCTCACCATTGGAATAATACCATTCGAAGTACCGTTAGTACCAGCAATGTAGGAT 181828
Query 54278 CCACTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAAT 54337
|| |||||||||||||| ||| | ||| || || || || |||| ||||||||
Sbjct 181827 CCTGTGGCACGAATATTATGAATGTGCAAACCAATTCCACCAGCAGTTTTGGAGATTAAA 181768
Query 54338 GCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGA 54397
|| ||| || || ||||| || ||||| || || |||||| |||| || ||
Sbjct 181767 GCACATTCCTTCAAAGTATCGTAAATGCCTTCAATTGAGTCATCCCGCATGGCAACTAAG 181708
Query 54398 AAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGC 54457
||||| |||||||| | || || || || ||||| | |||||||| || ||
Sbjct 181707 AAACATGATGACATTTGTGGGTGAGGGGTACCAGCGTTAAACAGAGTAGGAGAGGCATGA 181648
Query 54458 GTAAACCATTT----TTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCCCA 54513
|| || | || ||| |||| || || || || ||| || | || ||
Sbjct 181647 GTGAAATACTTCTGACTCATAAAG----TTATAAGTTTCAATAACTCTTGCAATGTCATC 181592
Query 54514 TTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTT 54573
|||||| || | || |||||||| | || ||| ||||| | ||| | | ||
Sbjct 181591 ACCATGAATGCCGATAGCAACACGCATAATCAAGTGTTGAGGACGTTCTGCAACATTACC 181532
Query 54574 GTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAA 54633
|| ||| |||| | ||| ||| ||||||| || || || ||||| ||||| || |||
Sbjct 181531 ATTAATTCTCAGAAGGTAAGATCTTTCCAAGGTCTTGAATCCAAAGTAGTTATACTGAAA 181472
Query 54634 GTCTCGTTCGTAAATAATAACTGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCAT 54693
||||| ||||| | |||| | ||||| || | ||| | ||| | || | | |
Sbjct 181471 GTCTCTATCGTAGACAATAGCAGAGTTCAGCTCATCAGCGTGTTTCTGGACAATGT---T 181415
Query 54694 GGTAAT-ACTT--GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTAAA 54750
| | | ||| |||| | ||||| ||||| || || || || |||| || | | |
Sbjct 181414 GTAAGTGTCTTCAGAAACCAGAGGAGAGTGTTTTCCGTTCTTTGGGTTGATGTATTCATA 181355
Query 54751 TAAATCCTTCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGC 54810
|| || || | || | | || | || | || | |||||||| ||| || || ||
Sbjct 181354 CAACTCTTTGGTTACCTGAGAGTATTGCTTAGTGGTCTGTTTGTGTAAATTGGAAACAGC 181295
Query 54811 TATTCTAGCGGCTAGAATGGCATAATCCGGATG 54843
||||| || || | |||||||||||| || ||
Sbjct 181294 AATTCTTGCTGCCAAAATGGCATAATCGGGGTG 181262
>seq28
Length=536101
Score = 158 bits (174), Expect = 1e-33
Identities = 561/862 (65%), Gaps = 16/862 (2%)
Strand=Plus/Minus
Query 23844 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 23903
|||||||| ||| || | |||||||| || || |||||||| | || || || ||
Sbjct 320157 TTTTGGTAATCAGAAACTCTCTTTTCGAAGAAGTTGGTTTTACCGGCCAAAGAAATGTTC 320098
Query 23904 TCCATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAATCCCAATTCAGAAATC 23963
|||||||| || |||||||| | || || || | |||| |||| | |
Sbjct 320097 TCCATGAAGTCAAATGGATTGTTGACGTTGTACACCTTTTTGTTGCCCAGAGCTACCAGT 320038
Query 23964 AATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAATTCATTCCTA-TAAG 24022
| ||| || || || ||||| | ||| ||||| || ||||| || | ||||
Sbjct 320037 AGTCTGTCAGCAACGAACTCAACATACTGGCACATCAAGCTGCAGTTCATCCCCAGTAAG 319978
Query 24023 TTTAACTGGAAGAGCCACAGT-AAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAA 24081
| | |||||||| | || ||| | | || ||| || ||| || ||||| ||||
Sbjct 319977 GAGA-CAGGAAGAGCGTCTGTGAAGTACCTTTT-TTCGATCTCGACAGCCTCTGTGATAA 319920
Query 24082 TAGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGA 24141
| | || |||| ||||| | | || |||||| ||| | ||| || || |
Sbjct 319919 TCTTTTCAACGATTTCCTCACTGGCTCTATTGTTTAAATGAGAAAATAGCAAGCAAGCAA 319860
Query 24142 AATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCA 24201
| || ||||| ||||||||||| | ||| | || ||||| || || | || ||||
Sbjct 319859 AGTCAGTGTGTAATCCCTCGTCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCTGGCA 319800
Query 24202 TTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTT 24261
| || || | ||| || | ||| || || || ||||| ||||| |||||||| || || |
Sbjct 319799 TGAGACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAAGATCCTGAAAAGAAGATACCCT 319740
Query 24262 CTACTGCCGCAAAGGCAATAAGTCTTTCTCC--ATAA-CCGGCGCTGTCATGTATCCA-C 24317
| || || || ||||||| | | ||| | | || | || ||| ||||| |
Sbjct 319739 CAACAGCAGCGAAGGCAACCAAACGTTCAGCGAACAATGCATCGTCATCAGAAATCCATC 319680
Query 24318 TTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGA 24377
| || ||||| || ||||| | ||| | ||| || || ||||| || ||||| || ||
Sbjct 319679 TCATG-GCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTCGATGGCATTGAACAGG 319621
Query 24378 TAGtttttttCATTACTATCTTTAACATATGTATCAATCA--AAAGACTATACATTTCCG 24435
| | || || |||||| | || |||||||||| || || || | || |
Sbjct 319620 AATTCAGACTCTTTTGGATCTTTGATGTAAGTATCAATCAGCAAGGA--GTAAGTCTCGG 319563
Query 24436 AATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTA 24495
| |||||||| || || || || || ||||| || ||| | || |||| || || |
Sbjct 319562 AGTGAATGTTCTCCATCATGATCTGGAAACCGTAAAAGCATTTTGCTTCGGGAAGTTGAA 319503
Query 24496 CTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAA 24555
| || || || ||| | || |||||||| || || |||||| ||| ||||| |
Sbjct 319502 CCTCAGCACTGAAATTTTCCACCAAGTTTTCATTGACAATACCGTCAGAGGCAGCAAAGA 319443
Query 24556 ACGCCAATACATGTTTTATAAAATATTTTTC-GTCTGGT--GTTAGTTTATTCCAATCAT 24612
| || | || || || ||||||| | | || | | |||||||| ||||
Sbjct 319442 AGGCAAGGACTCTCGAGATGAAGAATTTTTCATTATCGTTCATACGATTATTCCAGTCAT 319383
Query 24613 TGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTAT 24672
| ||| ||| | || | ||| || | |||||||| || || || |||| || |
Sbjct 319382 GCAAATCCTTACCCAGGTCTATTTCCTCAGCAGTCCAAAAGGAAGCTTCGGCCTGCTTGT 319323
Query 24673 ACATATTCCAGATGTCATGATA 24694
|||| | |||||| || || ||
Sbjct 319322 ACATTTGCCAGATATCGTGGTA 319301
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593720145382080
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