Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016585.1_202016-02-08]
196 sequences; 9,355,338 total letters
Query= NC_006966.1
Length=166259
Score E
Sequences producing significant alignments: (Bits) Value
seq28 154 2e-32
>seq28
Length=536101
Score = 154 bits (170), Expect = 2e-32
Identities = 590/919 (64%), Gaps = 25/919 (3%)
Strand=Plus/Minus
Query 21185 TTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATAGAT 21244
||||| |||||| |||||| |||||||| || || || || || |||| || ||
Sbjct 320157 TTTTGGTAATCAGAAACTCTCTTTTCGAAGAAGTTGGTTTTACCGGCCAAAGAAATGTTC 320098
Query 21245 TCCATAAAATCAAATGGATT-TTCAGATT-TAAATATTTTATTACAACCCAGTTCTGATA 21302
||||| || ||||||||||| || | || || | |||| | ||||| || |
Sbjct 320097 TCCATGAAGTCAAATGGATTGTTGACGTTGTACACCTTTTTGTTG--CCCAGAGCTACCA 320040
Query 21303 ATAATCTATCTGCTACAAATTCTATATATTGACACATTAATTCACAATTCATACCGATCA 21362
|| ||| || || || || || | ||| || ||||| || || ||||| || | |
Sbjct 320039 GTAGTCTGTCAGCAACGAACTCAACATACTGGCACATCAAGCTGCAGTTCATCCCCAGTA 319980
Query 21363 ATTTTACAGGAAGAGCTTTTGTCAAAAAAGATTTTTCTATAGAGACGGCTTCAACAATTA 21422
| ||||||||||| | ||| || | |||||| || ||| || || || |
Sbjct 319979 AGGAGACAGGAAGAGCGTCTGTGAAGTACCTTTTTTCGATCTCGACAGCCTCTGTGATAA 319920
Query 21423 TATTTATTATCCTAGATGTACTAGGGGGATACAAT----AATTGTTTAAACATCAAACAT 21478
| ||| || ||| | || || | | | || || ||| | ||| ||
Sbjct 319919 TCTTT----TCAACGATTTCCTCACTGGCTCTATTGTTTAAATGAGAAAATAGCAAGCAA 319864
Query 21479 GCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCG 21538
||||| ||| || || || || || || | || | ||||| || || || |||||
Sbjct 319863 GCAAAGTCAGTGTGTAATCCCTCGTCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCT 319804
Query 21539 GGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAATG 21598
||||| | |||||||| || ||||| || || || ||||| | |||||||||||| ||
Sbjct 319803 GGCATGAGACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAAGATCCTGAAAAGAAGATA 319744
Query 21599 CCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATTCTTTATCCAATATC 21658
|||||||| ||||| || ||||| || |||||| || | | || | ||| | |||
Sbjct 319743 CCCTCAACAGCAGCGAAGGCAACCAAACGTTCAGCGAACAATGCATCGTCATCAGAAATC 319684
Query 21659 CATTTTTCTGCCCATTTTGCCTTTTCTTTAATACAATCAATTGTATCAATAGCTTTTAAA 21718
||| | ||||| | ||||||||||| ||||| ||| || || || || || ||
Sbjct 319683 CATCTCATGGCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTCGATGGCATTGAAC 319624
Query 21719 AGATGAttt--ttttCATCTACATCGGTTATGNNNNNNNNNNNNNNNNNACTATACATTT 21776
|| || || || | | ||| | ||| || | |
Sbjct 319623 AG--GAATTCAGACTCTTTTGGATCTTTGATGTAAGTATCAATCAGCAAGGAGTAAGTCT 319566
Query 21777 CAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGCCTCTGAACATT 21836
| || || || || || ||| ||||| || |||||||| ||| |||| || | | ||
Sbjct 319565 CGGAGTGAATGTTCTCCATCATGATCTGGAAACCGTAAAAGCATTTTGCTTCGGGAAGTT 319506
Query 21837 GAACCTC-GGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCATCACTGGCGGCA 21895
||||||| | | | |||| || ||||||||||||| || || || ||| ||| |||
Sbjct 319505 GAACCTCAGCACTGAAAT-TTTCCACCAAGTTTTCATTGACAATACCGTCAGAGGCAGCA 319447
Query 21896 AAAAATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAAT----TTTTTCCA 21951
|| || || | | | || || || ||| ||||| ||| || || |||||
Sbjct 319446 AAGAAGGCAAGGACTCTCGAGATGAAGAATTTTTCATTATC-GTTCATACGATTATTCCA 319388
Query 21952 ATCTAATAAATCTTTTGATAAATCTACTTCTTCAGTTGTCCAAAAGCTAGCAATAGCCTT 22011
|| ||||| || | |||| ||| |||| ||||||||| ||| ||||
Sbjct 319387 GTCATGCAAATCCTTACCCAGGTCTATTTCCTCAGCAGTCCAAAAGGAAGCTTCGGCCTG 319328
Query 22012 TTTATACATAATCCAGATATCATTATATATTATTGGAAATATTACAAACCTGTTATTTGA 22071
|| ||||| ||||||||| | || | | || || | ||||| | | |||
Sbjct 319327 CTTGTACATTTGCCAGATATCGTGGTACTTCAAAGGGAAGAGCACAAAAC-GACGTTTAT 319269
Query 22072 T-TCAACTAAAAGTGGTTC 22089
| |||||||| ||||||||
Sbjct 319268 TCTCAACTAAGAGTGGTTC 319250
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 531899496843040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |