Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016585.1_202016-02-08]
196 sequences; 9,355,338 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq28 170 2e-37
seq39 82.4 9e-11
>seq28
Length=536101
Score = 170 bits (188), Expect = 2e-37
Identities = 583/901 (65%), Gaps = 17/901 (2%)
Strand=Plus/Minus
Query 92790 CATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTC 92849
||| ||||| |||||||| || |||| | ||||| ||||| || || || || |
Sbjct 320170 CATGACACCTGCCTTTTGGTAATCAGAAACTCTCTTTTCGAAGAAGTTGGTTTTACCGGC 320111
Query 92850 CAAAGATATCGAATTCACTA-GTGAT-TGGATTCTTGGCGTTATAATACTTTTCACCGAT 92907
|||||| || | || | || | |||||| ||| |||| || ||||| |
Sbjct 320110 CAAAGAAATGTTCTCCATGAAGTCAAATGGATTGTTGACGTTGTACACCTTTTTGTTGCC 320051
Query 92908 CAACTCGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATT 92967
|| | || || ||| ||||| || || || | ||||| ||||||| || ||
Sbjct 320050 CAGAGCTACCAGTAGTCTGTCAGCAACGAACTCAACATACTGGCACATCAAGCTGCAGTT 319991
Query 92968 CATTCCTAG-AAGACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGG 93026
||| || || ||| | ||||| |||||||| || ||| | ||| ||||| | || |
Sbjct 319990 CATCCCCAGTAAGGAG-ACAGGAAGAGCGTCTGTGAAGTACCTTTTTTCGATCTCGACAG 319932
Query 93027 CTTCTTTCAAGATTTCTATTAC--TCTACTATTTGG---TGGTTTTTGTACGACATAATT 93081
| ||| | | || | | || | | || ||| | | ||| | || | |||
Sbjct 319931 CCTCTGTGATAATCTTTTCAACGATTTCCTCACTGGCTCTATTGTTTAAATGAGAAAATA 319872
Query 93082 GTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCT 93141
| | |||| |||||||| || ||||| || ||||||| | || | |||||||
Sbjct 319871 GCA-----AGCAAGCAAAGTCAGTGTGTAATCCCTCGTCTCTGCAAATAAGCTCATTGGA 319817
Query 93142 GAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACC 93201
||| || |||||||| | || |||| ||||| | ||| || || ||||||||| ||
Sbjct 319816 GAAGGTCAAACCTGGCATGAGACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAAGATCC 319757
Query 93202 AGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGA 93261
||||| || ||||| || || || || || || || | |||||| || || |||
Sbjct 319756 TGAAAAGAAGATACCCTCAACAGCAGCGAAGGCAACCAAACGTTCAGCGAACAATGCATC 319697
Query 93262 ATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTC 93321
| | |||||| | | ||||| || || |||| || ||||| || | || ||
Sbjct 319696 GTCATCAGAAATCCATCTCATGGCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTC 319637
Query 93322 GATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAG 93381
||| || || || ||| | || ||| | | |||| ||||| ||||| || | ||
Sbjct 319636 GATGGCATTGAACAGGAATTCAGACTCTTTTGGATCTTTGATGTAAGTATCAATCAGCAA 319577
Query 93382 AGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGC 93441
|| || | || || || | |||||||| || ||||| ||||| || ||| | ||
Sbjct 319576 GGAGTAAGTCTCGGAGTGAATGTTCTCCATCATGATCTGGAAACCGTAAAAGCATTTTGC 319517
Query 93442 TTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATC 93501
||| | | || || || | || | || || | ||||||||||| ||||| ||
Sbjct 319516 TTCGGGAAGTTGAACCTCAGCACTGAAATTTTCCACCAAGTTTTCATTGACAATACCGTC 319457
Query 93502 GGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTT---TAAG 93558
|| || ||||| || || | | | || || ||| |||| ||| | || |
Sbjct 319456 AGAGGCAGCAAAGAAGGCAAGGACTCTCGAGATGAAGAATTTTTCATTATCGTTCATACG 319397
Query 93559 CTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGC 93618
|||| ||| || | ||| || || || | ||| || |||||||||| || ||
Sbjct 319396 ATTATTCCAGTCATGCAAATCCTTACCCAGGTCTATTTCCTCAGCAGTCCAAAAGGAAGC 319337
Query 93619 TTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAAACG 93678
||| || | |||||||| | ||| || || || || | | || || | ||||||||
Sbjct 319336 TTCGGCCTGCTTGTACATTTGCCAGATATCGTGGTACTTCAAAGGGAAGAGCACAAAACG 319277
Query 93679 A 93679
|
Sbjct 319276 A 319276
>seq39
Length=230164
Score = 82.4 bits (90), Expect = 9e-11
Identities = 63/71 (89%), Gaps = 3/71 (4%)
Strand=Plus/Plus
Query 126272 TTGGCCGAGT-GGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA-GCGTGGGTT 126329
|||||||||| |||||||||||||||||| | | ||||| || ||| ||| |||||||||
Sbjct 41162 TTGGCCGAGTTGGTCTAAGGCGCCAGATTAAGGTTCTGG-TCTCTCCGGAGGCGTGGGTT 41220
Query 126330 CGAACCCCACA 126340
|||||||||||
Sbjct 41221 CGAACCCCACA 41231
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556859435691040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |