Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016585.1_202016-02-08] 196 sequences; 9,355,338 total letters Query= NC_009334.1 Length=172764 Score E Sequences producing significant alignments: (Bits) Value seq88 1469 0.0 seq98 699 0.0 seq90 506 2e-138 >seq88 Length=870 Score = 1469 bits (1628), Expect = 0.0 Identities = 820/824 (99%), Gaps = 0/824 (0%) Strand=Plus/Minus Query 8246 ATTACACCCTTAGTTTACAGTCCAAAACCGCAGGGCGGCGTGTGGGGGCTGACGCGTGCC 8305 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 870 ATTACACCCTTATTTTACAGTCCAAAACCGCAGGGCGGCGTGTGGGGGCTGACGCGTGCC 811 Query 8306 CCCACTCCACAATTTCaaaaaaaaGAGTGGCCACTTGTCTTTGTTTATGGGCCCCATTGG 8365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 810 CCCACTCCACAATTTCAAAAAAAAGAGTGGCCACTTGTCTTTGTTTATGGGCCCCATTGG 751 Query 8366 CGTGGAGCCCCGTTTAATTTTCGGGGGTGTTAGAGACAACCAGTGGAGTCCGCTGCTGTC 8425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 750 CGTGGAGCCCCGTTTAATTTTCGGGGGTGTTAGAGACAACCAGTGGAGTCCGCTGCTGTC 691 Query 8426 GGCGTCCACTCTCTTTCCCCTTGTTACAAATAGAGTGTAACAACATGGTTCACCTGTCTT 8485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 690 GGCGTCCACTCTCTTTCCCCTTGTTACAAATAGAGTGTAACAACATGGTTCACCTGTCTT 631 Query 8486 GGTCCCTGCCTGGGACACATCTTAATAACCCCAGTATCATATTGCACTAGGATTATGTGT 8545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 630 GGTCCCTGCCTGGGACACATCTTAATAACCCCAGTATCATATTGCACTAGGATTATGTGT 571 Query 8546 TGCCCATAGCCATAAATTCGTGTGAGATGGACATCCAGTCTTTACGGCTTGTCCCCACCC 8605 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 570 TGCCCATAGCCATAAATTCGTGTGAGATGGACATCCAGTCTTTACGGCTTGTCCCCACCC 511 Query 8606 CATGGATTTCTATTGTTAAAGATATTCAGAATGTTTCATTCCTACACTAGTATTTATTGC 8665 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 510 CATGGATTTCTATTGTTAAAGATATTCAGAATGTTTCATTCCTACACTAGTATTTATTGC 451 Query 8666 CCAAGGAGTTTGTGAGGGTTATATTGGTGTCATAGCACAATGCCACCACTGAACCCCCCG 8725 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 450 CCAAGGGGTTTGTGAGGGTTATATTGGTGTCATAGCACAATGCCACCACTGAACCCCCCG 391 Query 8726 TCCAAATTTTATTCTGGGGGCGTCACCTGAAACCTTGTTTTCGAGCACCTCACATACACC 8785 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 390 TCCAAATTTTATTCTGGGGGCGTCACCTGAAACCTTGTTTTCGAGCACCTCACATACACC 331 Query 8786 TTACTGTTCACAACTCAGCAGTTATTCTATTAGCTAAACGAAGGAGAATGAAGAAGCAGG 8845 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 330 TTACTGTTCACAACTCAGCAGTTATTCTATTAGCTAAACGAAGGAGAATGAAGAAGCAGG 271 Query 8846 CGAAGATTCAGGAGAGTTCACTGCCCGCTCCTTGATCTTCAGCCACTGCCCTTGTGACTA 8905 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 270 CGAAGATTCAGGAGAGTTCACTGCCCGCTCCTTGATCTTCAGCCACTGCCCTTGTGACTA 211 Query 8906 AAATGGTTCACTACCCTCGTGGAATCCTGATCCCATGTAAATAAAACCGTGACAGCTCAT 8965 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 210 AAATGGTTCACTACCCTCGTGGAATCCTGACCCCATGTAAATAAAACCGTGACAGCTCAT 151 Query 8966 GGGGTGGGAGATATCGCTGTTCCTTAGGACCCTTTTACTAACCCTAATTCGATAGCATAT 9025 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 150 GGGGTGGGAGATATCGCTGTTCCTTAGGACCCTTTTACTAACCCTAATTCGATAGCATAT 91 Query 9026 GCTTCCCGTTGGGTAACATGTGCTATTGAATTAGGGTTAGTCTG 9069 ||||||||||||||||||| |||||||||||||||||||||||| Sbjct 90 GCTTCCCGTTGGGTAACATATGCTATTGAATTAGGGTTAGTCTG 47 >seq98 Length=462 Score = 699 bits (774), Expect = 0.0 Identities = 410/425 (96%), Gaps = 0/425 (0%) Strand=Plus/Plus Query 97933 TTGCAGAAGGTTTAAGACTTCTCCTGGCTAGGTGTCACGTAGAAAGGACTACCGAGGATG 97992 ||||||||||||||||| ||||||||||||| |||||||||||||||||||||| || | Sbjct 1 TTGCAGAAGGTTTAAGAGCTCTCCTGGCTAGGAGTCACGTAGAAAGGACTACCGACGAAG 60 Query 97993 GAAATTGGGTCGCCGGTGTGTTCGTATATGGAGGTAGTAAGACCTCCCTTTACAACCTCA 98052 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 61 GAACTTGGGTCGCCGGTGTGTTCGTATATGGAGGTAGTAAGACCTCCCTTTACAACCTAA 120 Query 98053 GGCGAGGAATTGGCCTTGCTATTCCACAATGTCGTCTTACACCATTGAGTCGTCTCCCCT 98112 ||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 GGCGAGGAACTGCCCTTGCTATTCCACAATGTCGTCTTACACCATTGAGTCGTCTCCCCT 180 Query 98113 TTGGAATGGCCCCTGGACCCGGCCCACAACCTGGCCCACTAAGGGAGTCCATTGTCTGTT 98172 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 181 TTGGAATGGCCCCTGGACCCGGCCCACAACCTGGCCCGCTAAGGGAGTCCATTGTCTGTT 240 Query 98173 ATTTCATTGTCTTTTTACAAACTCATATATTTGCTGAGGGTTTGAAGGATGCGATTAAGG 98232 ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 241 ATTTCATGGTCTTTTTACAAACTCATATATTTGCTGAGGTTTTGAAGGATGCGATTAAGG 300 Query 98233 ACCTTGTTTTGCCAAAGCCCGCTCCTACCTGCAATATCAAGGTGACTGTGTGCAGCTTTG 98292 |||||||| || ||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 301 ACCTTGTTATGACAAAGCCCGCTCCTACCTGCAATATCAGGGTGACTGTGTGCAGCTTTG 360 Query 98293 ACGATGGAGTAGATTTGCCTCCCTGGTTTCCACCTATGGTGGAAGGGGCTGCCGCGGAGG 98352 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 361 ACGATGGAGTAGATTTGCCTCCCTGGTTTCCACCTATGGTGGAAGGGGCTGCCGCGGAGG 420 Query 98353 GTGAT 98357 ||||| Sbjct 421 GTGAT 425 >seq90 Length=761 Score = 506 bits (560), Expect = 2e-138 Identities = 289/295 (98%), Gaps = 0/295 (0%) Strand=Plus/Plus Query 96108 GATCCTCACAGGCCGCACCCAGCTCTTCTTCCGTTGCCCCAGTAGCATCTCTGTCTGGTG 96167 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 467 GATCCTCACAGGCCGCACCCAGCTTTTCTTCCGTTGCCCCAGTAGCATCTCTGTCTGGTG 526 Query 96168 ACCTTGAAGAGGAAGAGGAGGGGTCCCGAGAATCCCCATCCCTACCGTCCAGCAAAAAGG 96227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 527 ACCTTGAAGAGGAAGAGGAGGGGTCCCGAGAATCCCCATCCCTACCGTCCAGCAAAAAGG 586 Query 96228 GGGCCGATGAATTTGAGGCCTGGCTTGAGGCTCAGGATGCAAATTTTGAGGATGTTCAGC 96287 ||| ||| ||||||||||||||||||||||||||||| |||||| ||||||||||||||| Sbjct 587 GGGACGAGGAATTTGAGGCCTGGCTTGAGGCTCAGGACGCAAATCTTGAGGATGTTCAGC 646 Query 96288 GAGAGTTTTCCGGGCTGCGAGTAATTGGTGATGAGGACGAGGATGGTTCGGAGGATGGGG 96347 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 647 GGGAGTTTTCCGGGCTGCGAGTAATTGGTGATGAGGACGAGGATGGTTCGGAGGATGGGG 706 Query 96348 AATTTTCAGACCTGGATCTGTCTGACAGCGACCATGAAGGGGATGAGGGTGGGGG 96402 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 707 AATTTTCAGACCTGGATCTGTCTGACAGCGACCATGAAGGGGATGAGGGTGGGGG 761 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 552715445843840