Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016585.1_202016-02-08]
196 sequences; 9,355,338 total letters
Query= NC_009334.1
Length=172764
Score E
Sequences producing significant alignments: (Bits) Value
seq88 1469 0.0
seq98 699 0.0
seq90 506 2e-138
>seq88
Length=870
Score = 1469 bits (1628), Expect = 0.0
Identities = 820/824 (99%), Gaps = 0/824 (0%)
Strand=Plus/Minus
Query 8246 ATTACACCCTTAGTTTACAGTCCAAAACCGCAGGGCGGCGTGTGGGGGCTGACGCGTGCC 8305
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 870 ATTACACCCTTATTTTACAGTCCAAAACCGCAGGGCGGCGTGTGGGGGCTGACGCGTGCC 811
Query 8306 CCCACTCCACAATTTCaaaaaaaaGAGTGGCCACTTGTCTTTGTTTATGGGCCCCATTGG 8365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 810 CCCACTCCACAATTTCAAAAAAAAGAGTGGCCACTTGTCTTTGTTTATGGGCCCCATTGG 751
Query 8366 CGTGGAGCCCCGTTTAATTTTCGGGGGTGTTAGAGACAACCAGTGGAGTCCGCTGCTGTC 8425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 750 CGTGGAGCCCCGTTTAATTTTCGGGGGTGTTAGAGACAACCAGTGGAGTCCGCTGCTGTC 691
Query 8426 GGCGTCCACTCTCTTTCCCCTTGTTACAAATAGAGTGTAACAACATGGTTCACCTGTCTT 8485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 690 GGCGTCCACTCTCTTTCCCCTTGTTACAAATAGAGTGTAACAACATGGTTCACCTGTCTT 631
Query 8486 GGTCCCTGCCTGGGACACATCTTAATAACCCCAGTATCATATTGCACTAGGATTATGTGT 8545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 630 GGTCCCTGCCTGGGACACATCTTAATAACCCCAGTATCATATTGCACTAGGATTATGTGT 571
Query 8546 TGCCCATAGCCATAAATTCGTGTGAGATGGACATCCAGTCTTTACGGCTTGTCCCCACCC 8605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 570 TGCCCATAGCCATAAATTCGTGTGAGATGGACATCCAGTCTTTACGGCTTGTCCCCACCC 511
Query 8606 CATGGATTTCTATTGTTAAAGATATTCAGAATGTTTCATTCCTACACTAGTATTTATTGC 8665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 510 CATGGATTTCTATTGTTAAAGATATTCAGAATGTTTCATTCCTACACTAGTATTTATTGC 451
Query 8666 CCAAGGAGTTTGTGAGGGTTATATTGGTGTCATAGCACAATGCCACCACTGAACCCCCCG 8725
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 450 CCAAGGGGTTTGTGAGGGTTATATTGGTGTCATAGCACAATGCCACCACTGAACCCCCCG 391
Query 8726 TCCAAATTTTATTCTGGGGGCGTCACCTGAAACCTTGTTTTCGAGCACCTCACATACACC 8785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 390 TCCAAATTTTATTCTGGGGGCGTCACCTGAAACCTTGTTTTCGAGCACCTCACATACACC 331
Query 8786 TTACTGTTCACAACTCAGCAGTTATTCTATTAGCTAAACGAAGGAGAATGAAGAAGCAGG 8845
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 330 TTACTGTTCACAACTCAGCAGTTATTCTATTAGCTAAACGAAGGAGAATGAAGAAGCAGG 271
Query 8846 CGAAGATTCAGGAGAGTTCACTGCCCGCTCCTTGATCTTCAGCCACTGCCCTTGTGACTA 8905
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 270 CGAAGATTCAGGAGAGTTCACTGCCCGCTCCTTGATCTTCAGCCACTGCCCTTGTGACTA 211
Query 8906 AAATGGTTCACTACCCTCGTGGAATCCTGATCCCATGTAAATAAAACCGTGACAGCTCAT 8965
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 210 AAATGGTTCACTACCCTCGTGGAATCCTGACCCCATGTAAATAAAACCGTGACAGCTCAT 151
Query 8966 GGGGTGGGAGATATCGCTGTTCCTTAGGACCCTTTTACTAACCCTAATTCGATAGCATAT 9025
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 150 GGGGTGGGAGATATCGCTGTTCCTTAGGACCCTTTTACTAACCCTAATTCGATAGCATAT 91
Query 9026 GCTTCCCGTTGGGTAACATGTGCTATTGAATTAGGGTTAGTCTG 9069
||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 90 GCTTCCCGTTGGGTAACATATGCTATTGAATTAGGGTTAGTCTG 47
>seq98
Length=462
Score = 699 bits (774), Expect = 0.0
Identities = 410/425 (96%), Gaps = 0/425 (0%)
Strand=Plus/Plus
Query 97933 TTGCAGAAGGTTTAAGACTTCTCCTGGCTAGGTGTCACGTAGAAAGGACTACCGAGGATG 97992
||||||||||||||||| ||||||||||||| |||||||||||||||||||||| || |
Sbjct 1 TTGCAGAAGGTTTAAGAGCTCTCCTGGCTAGGAGTCACGTAGAAAGGACTACCGACGAAG 60
Query 97993 GAAATTGGGTCGCCGGTGTGTTCGTATATGGAGGTAGTAAGACCTCCCTTTACAACCTCA 98052
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 61 GAACTTGGGTCGCCGGTGTGTTCGTATATGGAGGTAGTAAGACCTCCCTTTACAACCTAA 120
Query 98053 GGCGAGGAATTGGCCTTGCTATTCCACAATGTCGTCTTACACCATTGAGTCGTCTCCCCT 98112
||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 121 GGCGAGGAACTGCCCTTGCTATTCCACAATGTCGTCTTACACCATTGAGTCGTCTCCCCT 180
Query 98113 TTGGAATGGCCCCTGGACCCGGCCCACAACCTGGCCCACTAAGGGAGTCCATTGTCTGTT 98172
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 181 TTGGAATGGCCCCTGGACCCGGCCCACAACCTGGCCCGCTAAGGGAGTCCATTGTCTGTT 240
Query 98173 ATTTCATTGTCTTTTTACAAACTCATATATTTGCTGAGGGTTTGAAGGATGCGATTAAGG 98232
||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 241 ATTTCATGGTCTTTTTACAAACTCATATATTTGCTGAGGTTTTGAAGGATGCGATTAAGG 300
Query 98233 ACCTTGTTTTGCCAAAGCCCGCTCCTACCTGCAATATCAAGGTGACTGTGTGCAGCTTTG 98292
|||||||| || ||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 301 ACCTTGTTATGACAAAGCCCGCTCCTACCTGCAATATCAGGGTGACTGTGTGCAGCTTTG 360
Query 98293 ACGATGGAGTAGATTTGCCTCCCTGGTTTCCACCTATGGTGGAAGGGGCTGCCGCGGAGG 98352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 361 ACGATGGAGTAGATTTGCCTCCCTGGTTTCCACCTATGGTGGAAGGGGCTGCCGCGGAGG 420
Query 98353 GTGAT 98357
|||||
Sbjct 421 GTGAT 425
>seq90
Length=761
Score = 506 bits (560), Expect = 2e-138
Identities = 289/295 (98%), Gaps = 0/295 (0%)
Strand=Plus/Plus
Query 96108 GATCCTCACAGGCCGCACCCAGCTCTTCTTCCGTTGCCCCAGTAGCATCTCTGTCTGGTG 96167
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 467 GATCCTCACAGGCCGCACCCAGCTTTTCTTCCGTTGCCCCAGTAGCATCTCTGTCTGGTG 526
Query 96168 ACCTTGAAGAGGAAGAGGAGGGGTCCCGAGAATCCCCATCCCTACCGTCCAGCAAAAAGG 96227
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 527 ACCTTGAAGAGGAAGAGGAGGGGTCCCGAGAATCCCCATCCCTACCGTCCAGCAAAAAGG 586
Query 96228 GGGCCGATGAATTTGAGGCCTGGCTTGAGGCTCAGGATGCAAATTTTGAGGATGTTCAGC 96287
||| ||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||
Sbjct 587 GGGACGAGGAATTTGAGGCCTGGCTTGAGGCTCAGGACGCAAATCTTGAGGATGTTCAGC 646
Query 96288 GAGAGTTTTCCGGGCTGCGAGTAATTGGTGATGAGGACGAGGATGGTTCGGAGGATGGGG 96347
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 647 GGGAGTTTTCCGGGCTGCGAGTAATTGGTGATGAGGACGAGGATGGTTCGGAGGATGGGG 706
Query 96348 AATTTTCAGACCTGGATCTGTCTGACAGCGACCATGAAGGGGATGAGGGTGGGGG 96402
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 707 AATTTTCAGACCTGGATCTGTCTGACAGCGACCATGAAGGGGATGAGGGTGGGGG 761
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 552715445843840
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