Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016585.1_202016-02-08] 196 sequences; 9,355,338 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq33 219 5e-52 seq28 96.9 4e-15 >seq33 Length=271133 Score = 219 bits (242), Expect = 5e-52 Identities = 797/1234 (65%), Gaps = 25/1234 (2%) Strand=Plus/Minus Query 106094 TCCCACATATCAAATTGAAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAG 106153 ||||||| ||| |||| | | || || || | |||||||| | || || || ||| Sbjct 182775 TCCCACAAGTCATATTGCAAAATGCCCTGAGATGCTGGAGAACCTTGGAAGGTTTCGTAG 182716 Query 106154 GAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCA 106213 | |||| | | || ||||| | || |||| | ||| || || || |||||| Sbjct 182715 GCTCCTTCTTCGACGGCTAATTCGTTGGAGGCTTCCAAAGCTGCATGGTAGATAGTTTCA 182656 Query 106214 AAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATA 106273 || || || ||| | || |||||||| |||||||| | | || ||| Sbjct 182655 AAAATCTGAATATTAAGCTGTTTGGCTTCTGGAGAATCAAAAGGAATTCTCAACTTCATA 182596 Query 106274 AATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTT 106333 || |||| || | |||||||||||||| | | |||||||| | |||||||| || | Sbjct 182595 AAAGCATCAGCTAAACCTTGAACACCCACAGCTATAGGTCTATTACGCATATTCGATCTC 182536 Query 106334 CGCGCAGTCTC-AACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAAC 106392 | || ||| |||||| |||||||||||||| || | || ||| | || ||||| Sbjct 182535 CTAGCT-TCTGGAACGGGGTAAAAATTTCTGTCGATAATTCTGTTCAAGTTACGAGTAAC 182477 Query 106393 AATCTTTGTGATTTCATGAAGTTTTTCATA-----ATCAAAAGTGCGAGTCTCTTC---A 106444 | || ||||||||||| || |||||| | | || ||| |||| || || Sbjct 182476 CACTTTGGTGATTTCATGCAGCTTTTCAAAGTTGTACCAGCAGT--GAGTATCATCGGTT 182419 Query 106445 TTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCT 106504 | ||| | |||||| || || || ||||| || || ||||| ||||| ||| Sbjct 182418 TCAACAAAGGCTGGAAGAGCAATAGAAGCCAAGTTACAGACAGCAGTCTCTTCCGGGGAA 182359 Query 106505 GTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGG 106564 | ||| || | |||||| || | ||| || ||||| ||||| ||||| ||| Sbjct 182358 GAGTATTCAACAATTTCACAGCAAAGGTTAGAGGATTTAATGACACCCAAGTTCTTCTGG 182299 Query 106565 TTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGT 106624 ||| | |||||||| || |||||||| || |||||| | || || || || || || ||| Sbjct 182298 TTAGTTTTTTTGTTACAAGCATCCTTATACAGCATGAATGGAGTACCAGTTTCTGTTTGT 182239 Query 106625 GACTTGAGAATTGCCTTCCACACATCGGCGGC--TGGTACAATGGCGTTGGCCCGTCCCT 106682 | || || || || | ||| | | ||| || | || | | | || || | Sbjct 182238 GCCTCAAGGATGGCGTACCAAAGCTTTTGGGCTTTGATGGTTTGTC--TTCCACGACCTT 182181 Query 106683 CCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTG 106742 || ||||| || ||| | | ||||| || || || |||||| || || | Sbjct 182180 CCTTTTCGTATCTTTCGTACAATTCCTCAAATTCATCTCCATAGACGTCGGCAAGGCCAG 182121 Query 106743 GTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAA 106802 | || | |||| |||| || | ||| | ||| || || || | |||||||| | Sbjct 182120 GAGCTTCACTTGGAGAGAACAGGGTCCAATCGCCATTCTGTTCTACTCTTTTCATGAACA 182061 Query 106803 GGTCTGGAATCCACAGGGATGAAAAGAGATCTCTA-CACCGAGCCTCTTCGTCACCTTGG 106861 | || || ||||||| | | || | |||||| | | || ||| || | ||| ||| Sbjct 182060 GATCAGGGATCCACAAAGCGGGGAATAAGTCTCTAGCTCTGA-TCTCCTCTTTACCATGG 182002 Query 106862 TTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCG 106921 || || | |||| ||| | | ||| || || ||||||||||| | || | || Sbjct 182001 TTCTTACGAATATCAATGAAGGCAAAGATGTCGGCATGCCATGGCTCCAAGTACAAAGCA 181942 Query 106922 ATAGATCC----CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATAC 106977 | | || | || | ||| |||| | ||||| || || ||| ||| || || Sbjct 181941 AATGCACCAGGACGTTTG-TTACCACCTTGGTCAACATAACGAGCAGTGTTGTTGAAGAC 181883 Query 106978 GCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATT 107037 | | ||||||||||||||||| || ||| || || || ||| ||| | Sbjct 181882 CCTCACCATTGGAATAATACCATTCGAAGTACCGTTAGTACCAGCAATGTAGGATCCTGT 181823 Query 107038 GGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACA 107097 ||| | | || ||| ||||||| ||||| || ||||| || |||||| ||||| Sbjct 181822 GGCACGAATATTATGAATGTGCAAACCAATTCCACCAGCAGTTTTGGAGATTAAAGCACA 181763 Query 107098 CTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCA 107157 ||| | | ||| | || || || | |||||||| ||| |||| | | ||| || Sbjct 181762 TTCCTTCAAAGTATCGTAAATGCCTTCAATTGAGTCATCCCGCATGGCAACTAAGAAACA 181703 Query 107158 ACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAA 107217 ||||| || || || |||||||| || || || || || | || ||| |||| Sbjct 181702 TGATGACATTTGTGGGTGAGGGGTACCAGCGTTAAACAGAGTAGGAGAGGCATGAGTGAA 181643 Query 107218 CATACCT-TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGA 107276 |||| | || ||| || || || || | || ||||||| || || || | Sbjct 181642 -ATACTTCTGACTCATAAAGTTATAAGTTTCAATAACTCTTGCAATGTCATCACCATGAA 181584 Query 107277 TGCCGATGGCCACACGCATAAACATGTATTGGGG 107310 ||||||| || |||||||||| || || ||| || Sbjct 181583 TGCCGATAGCAACACGCATAATCAAGTGTTGAGG 181550 >seq28 Length=536101 Score = 96.9 bits (106), Expect = 4e-15 Identities = 167/238 (70%), Gaps = 10/238 (4%) Strand=Plus/Minus Query 117274 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCT 117333 ||||| || ||| | ||||| |||| | ||||||| ||||| |||||| | ||| Sbjct 319863 GCAAAGTCAGTGTGTAATCCCTCGTCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCT 319804 Query 117334 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGC-GCAGAATGACCCGGAGAAGAAGAT 117392 ||||||||||| | |||||||||||| | |||| ||| || || || || |||||||| Sbjct 319803 GGCATGAGACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAA-GATCCTGAAAAGAAGAT 319745 Query 117393 ACCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGT-GTC-- 117449 |||||| ||| || || |||| | || || ||||| | | | | || || Sbjct 319744 ACCCTCAACAGCAGCGAAGGCAACCAAACGTTCAGCGAA----CAATGCATCGTCATCAG 319689 Query 117450 -AAACCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGC 117506 || |||| |||| ||||| | ||||| | | |||||||| | || | |||||| Sbjct 319688 AAATCCATCTCATGGCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTCGATGGC 319631 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589979354547040