Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016595.1_202016-02-08] 207 sequences; 9,358,152 total letters Query= NC_001798.2 Length=154675 Score E Sequences producing significant alignments: (Bits) Value seq96 343 1e-89 seq91 140 3e-28 seq83 100 3e-16 >seq96 Length=585 Score = 343 bits (380), Expect = 1e-89 Identities = 232/260 (89%), Gaps = 0/260 (0%) Strand=Plus/Minus Query 48086 CCACCAGGATTTGTGGAACGCTGCTGACGCTGATGAGCGGGTCGCTGCAGGGTCGCTCGC 48145 || || |||| || || |||||| |||||||| | |||||||||||||||||||||||| Sbjct 559 CCCCCGGGATCTGCGGCACGCTGTTGACGCTGTTAAGCGGGTCGCTGCAGGGTCGCTCGG 500 Query 48146 TGTTCGAGGCCACGCGCGTCACCTTAATATGCGAAGTGGACCTCGGGCCGCGCCGCCCAG 48205 ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| | Sbjct 499 TGTTCGAGGCCACACGCGTCACCTTAATATGCGAAGTGGACCTCGGACCGCGCCGCCCCG 440 Query 48206 ACTGCATCTGCGTGTTCGAATTCGCCAATGACAAAACGTTGGGAGGTGTGTGCGTCATCC 48265 |||||||||||||||||||||||||||||||||| ||| |||| || || || |||||| Sbjct 439 ACTGCATCTGCGTGTTCGAATTCGCCAATGACAAGACGCTGGGCGGGGTTTGTGTCATCA 380 Query 48266 TGGAGCTAAAGACATGCAAATCGATTTCTTCCGGGGACACGGCCAGCAAACGCGAACAGC 48325 | || |||||||||||||||| ||||||||||||||||| |||||||||||||| || | Sbjct 379 TAGAACTAAAGACATGCAAATATATTTCTTCCGGGGACACCGCCAGCAAACGCGAGCAAC 320 Query 48326 GGACCACGGGCATGAAGCAG 48345 || ||||||| ||||||||| Sbjct 319 GGGCCACGGGGATGAAGCAG 300 >seq91 Length=783 Score = 140 bits (154), Expect = 3e-28 Identities = 126/156 (81%), Gaps = 2/156 (1%) Strand=Plus/Minus Query 46379 TCCGCGCTGGGGGTCGCTGGCGTCGGGGGTGTTGGGCAACCACAGACGCCCGGTGTTTGT 46438 ||||||| | || | || |||||||||||| |||| |||||||||||||||||| || Sbjct 278 TCCGCGCGGTGGTTTTTGGGGGTCGGGGGTGTTTGGCAGCCACAGACGCCCGGTGTTCGT 219 Query 46439 GTCGCGCCAGTACGTGCGGGCCAACCCCAGACCGTGCAAAAACCACGGGTCGATTTGCTC 46498 ||||||||||||| ||||| ||| ||||| || | ||||||||| ||||| | ||||| Sbjct 218 GTCGCGCCAGTACATGCGGTCCATGCCCAGGCCATCCAAAAACCATGGGTCTGTCTGCTC 159 Query 46499 CGTCCAGTACGT-GTCATGGCCCCCGGCAACGCCCA 46533 ||||||| ||| | | || |||| |||||||||| Sbjct 158 AGTCCAGT-CGTGGACCTGACCCCACGCAACGCCCA 124 >seq83 Length=928 Score = 100 bits (110), Expect = 3e-16 Identities = 118/158 (75%), Gaps = 5/158 (3%) Strand=Plus/Plus Query 46767 TCGGTGGGGTGCTGATACGGTGCCAGCCCTGGCCCCGAACCCCCGCGCTTATGGACACAC 46826 |||||||||| || | ||||||||||||| ||||||||| ||| ||||| ||| || Sbjct 34 TCGGTGGGGTATCGACAGAGTGCCAGCCCTGGGACCGAACCCC-GCGTTTATGAACAAAC 92 Query 46827 CACACGACAACAATGCCTTTTATTCTGTTCTTTTATTGCCGTCATCGCCGGGAGGCCTTC 46886 || | ||| | ||| ||||||||||| ||||||||||||||| || || ||||| Sbjct 93 GACCCAACACCCGTGCGTTTTATTCTGTCTTTTTATTGCCGTCATAGCGCGGGTTCCTTC 152 Query 46887 CGTTCGGG----CTTCCGTGTTTGAACTAAACTCCCCC 46920 || | | ||||||||||| | || ||||||| Sbjct 153 CGGTATTGTCTCCTTCCGTGTTTCAGTTAGCCTCCCCC 190 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494830719622200