Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016595.1_202016-02-08]
207 sequences; 9,358,152 total letters
Query= NC_001806.2
Length=152222
Score E
Sequences producing significant alignments: (Bits) Value
seq91 509 2e-139
seq96 448 5e-121
seq83 349 3e-91
>seq91
Length=783
Score = 509 bits (564), Expect = 2e-139
Identities = 285/287 (99%), Gaps = 0/287 (0%)
Strand=Plus/Minus
Query 46183 CGCCAGAAATCCGCGCGGTGGTTTTTGGGGGTCGGGGGTGTTTGGCAGCCACAGACGCCC 46242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 287 CGCCAGAAATCCGCGCGGTGGTTTTTGGGGGTCGGGGGTGTTTGGCAGCCACAGACGCCC 228
Query 46243 GGTGTTCGTGTCGCGCCAGTACATGCGGTCCATGCCCAGGCCATCCAAAAACCATGGGTC 46302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 227 GGTGTTCGTGTCGCGCCAGTACATGCGGTCCATGCCCAGGCCATCCAAAAACCATGGGTC 168
Query 46303 TGTCTGCTCAGTCCAGTCGTGGACCTGACCCCACGCAACGCCCAAAATAATAACCCCCAC 46362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 167 TGTCTGCTCAGTCCAGTCGTGGACCTGACCCCACGCAACGCCCAAAATAATAACCCCCAC 108
Query 46363 GAACCATAAACCATTCCCCATGGGGGACCCCGTCCCTAACCCACGGGGCCCGTGGCTATG 46422
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 107 GAACCATAAACCATTCCCCATGGGGGACCCCGTCCCTAACCCACGGGGCCAGTGGCTATG 48
Query 46423 GCAGGGCTTGCCGCCCCGACGTTGGCTGCGAGCCCTGGGCCTTCACC 46469
||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 47 GCAGGGCCTGCCGCCCCGACGTTGGCTGCGAGCCCTGGGCCTTCACC 1
>seq96
Length=585
Score = 448 bits (496), Expect = 5e-121
Identities = 251/253 (99%), Gaps = 0/253 (0%)
Strand=Plus/Minus
Query 47857 GATCTGCGGCACGCTGTTGACGCTGTTAAGCGGGTCGCTGCAGGGTCGCTCGGTATTCGA 47916
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 552 GATCTGCGGCACGCTGTTGACGCTGTTAAGCGGGTCGCTGCAGGGTCGCTCGGTGTTCGA 493
Query 47917 GGCCACACGCGTCACCTTAATATGCGAAGTGGACCTGGGACCGCGCCGCCCCGACTGCAT 47976
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 492 GGCCACACGCGTCACCTTAATATGCGAAGTGGACCTCGGACCGCGCCGCCCCGACTGCAT 433
Query 47977 CTGCGTGTTCGAATTCGCCAATGACAAGACGCTGGGCGGGGTTTGTGTCATCATAGAACT 48036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 432 CTGCGTGTTCGAATTCGCCAATGACAAGACGCTGGGCGGGGTTTGTGTCATCATAGAACT 373
Query 48037 AAAGACATGCAAATATATTTCTTCCGGGGACACCGCCAGCAAACGCGAGCAACGGGCCAC 48096
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 372 AAAGACATGCAAATATATTTCTTCCGGGGACACCGCCAGCAAACGCGAGCAACGGGCCAC 313
Query 48097 GGGGATGAAGCAG 48109
|||||||||||||
Sbjct 312 GGGGATGAAGCAG 300
>seq83
Length=928
Score = 349 bits (386), Expect = 3e-91
Identities = 196/198 (99%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 46499 AAGAAACGCGGGCGTATTGGTCCCAATGGGGTCTCGGTGGGGTATCGACAGAGTGCCAGC 46558
||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct 1 AAGAAACGCGGGCGTATGGGCCCCAATGGGGTCTCGGTGGGGTATCGACAGAGTGCCAGC 60
Query 46559 CCTGGGACCGAACCCCGCGTTTATGAACAAACGACCCAACACCCGTGCGTTTTATTCTGT 46618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 CCTGGGACCGAACCCCGCGTTTATGAACAAACGACCCAACACCCGTGCGTTTTATTCTGT 120
Query 46619 CTTTTTATTGCCGTCATAGCGCGGGTTCCTTCCGGTATTGTCTCCTTCCGTGTTTCAGTT 46678
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 121 CTTTTTATTGCCGTCATAGCGCGGGTTCCTTCCGGTATTGTCTCCTTCCGTGTTTCAGTT 180
Query 46679 AGCCTCCCCCATCTCCCG 46696
||||||||||||||||||
Sbjct 181 AGCCTCCCCCATCTCCCG 198
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 486981139933040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |