Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016595.1_202016-02-08]
207 sequences; 9,358,152 total letters
Query= NC_002686.2
Length=124784
Score E
Sequences producing significant alignments: (Bits) Value
seq28 145 6e-30
>seq28
Length=584134
Score = 145 bits (160), Expect = 6e-30
Identities = 380/576 (66%), Gaps = 19/576 (3%)
Strand=Plus/Minus
Query 20218 GGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGAC 20277
|| |||||||| || ||||| |||||||||||| | |||||||||||| | ||| |||
Sbjct 304561 GGCGATTTGGGGCCAGTGTACGGATTTCAATGGCGCCATTTTGGAGCTCAGTATAAAGAC 304502
Query 20278 ATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTTAATT 20337
|| ||| | || ||||||||| | |||||| | | || ||| | ||
Sbjct 304501 TGTAAGACAGACTACACTGGACAAGGGTTTGATCAACTTTCTAGGGTAATTGAAACTCTT 304442
Query 20338 AAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTGCCT 20397
|| || ||| | ||||||||||| || | | || |||||| || |||| |
Sbjct 304441 CGTACCAATCCATATGACAGAAGAATAATCATGAGTGCATGGAACCCTCCAGATTTTGAG 304382
Query 20398 TTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTA---------AT 20448
||||||| | || || |||||| | | || || ||||| ||| || ||
Sbjct 304381 AAAATGGCTCTCCCACCCTGTCATGTATTTTGTCACTTTTATGTTTCTTTCCCGAAAGAT 304322
Query 20449 AA------TGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTT 20502
|| |||||| || ||| ||||||||| || ||| |||||||||| |||| |||
Sbjct 304321 AAAAAGCCTGAATTATCTTGTTTAATGTATCAGCGCTCCTGTGATATGGGATTGGGAGTT 304262
Query 20503 CCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTA 20562
|||||||| | || |||||||| |||| || | ||||| ||||| || ||| |
Sbjct 304261 CCTTTCAACGTCGCCAGTTATGCCTTGCTGACCAAAATGATAGCACACGTAGTCGATATG 304202
Query 20563 AAAACGGGTGACTTAGTCCACACCATAGGAGACGCGCATATTTACCTTAATCATATAGA- 20621
| || ||||| | || ||||| || || || ||| | ||||| | ||| ||||
Sbjct 304201 GACTGTGGGGACTTTATACATACCATGGGTGATGCACATGTGTACCTAGACCATGTAGAT 304142
Query 20622 ACCTTTAAAATTACAGTTAACACGACAACCAAAACAATTCCCAACTCTTCGCAT-TACTC 20680
|| | ||| || | | | | || |||| | |||| || || | | || || |
Sbjct 304141 GCCCTGAAAGTTCAGGCTGAAAGGATTCCCAAGA-AATTTCCCACGTTAAGAATCAACAC 304083
Query 20681 GAACTGTTAAAGATATTAACGATTTTAAAGCTGATGATTTTGTGTTAGAAGGTTATAATC 20740
|||| |||||||| | | ||| ||| ||| || ||| | |||| |||| |||
Sbjct 304082 GAAC-ACCAAAGATATCGATGGTTTCAAATTTGAGGACTTTCAGATAGATAATTATGATC 304024
Query 20741 CCCATAATTCAATTCCAATGGAAATGTCTGTTTAAT 20776
| ||| | || |||| ||||||| || ||||
Sbjct 304023 CTCATCCACCCATCAAAATGAAAATGTCCGTGTAAT 303988
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 399182992933615
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |