Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016595.1_202016-02-08]
207 sequences; 9,358,152 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq27 95.1 2e-14
>seq27
Length=151803
Score = 95.1 bits (104), Expect = 2e-14
Identities = 135/188 (72%), Gaps = 3/188 (2%)
Strand=Plus/Minus
Query 279702 TCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGTGCC 279761
|| ||||| ||||||||||||||||||||||| | || | ||| |||| |||
Sbjct 104056 TCCCTGTCTGGTGGTTGGAAGATGAAGCTGGCTTTGGCTAGAGCCGTTCTTAGAAATGCT 103997
Query 279762 GATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGGCTA 279821
|| | || |||| ||||| ||||| ||||| ||||||| |||||| || ||| |
Sbjct 103996 GACATTCTGTTGCTAGATGAACCAACTAACCATTTGGACACTGTCAACGTTGCTTGGTTG 103937
Query 279822 GTGTCCTACCTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCACGACTCTGGC 279881
|| |||| | | | | || ||| || | ||| |||||||||| || ||||||||
Sbjct 103936 GTCAACTACTTGAATACT-TGTGGAA--TTACATCCATCATTGTCTCCCATGACTCTGGT 103880
Query 279882 TTCCTAGA 279889
||||| ||
Sbjct 103879 TTCCTGGA 103872
Score = 86.0 bits (94), Expect = 1e-11
Identities = 119/167 (71%), Gaps = 0/167 (0%)
Strand=Plus/Minus
Query 280672 CCAAGCTGGGTCTGGACCCCGAGTTTACAACTCACTCTCGCATTCGCGGTCTTTCTGGAG 280731
||| | |||||||||| | ||||| ||||||| || || | ||||| ||||| |
Sbjct 103044 CCATGTTGGGTCTGGATGCTGAGTTGGTTTCTCACTCCCGTATCAGAGGTCTGTCTGGTG 102985
Query 280732 GCCAGAAGGTCAAACTTGTCATCGGAGCAGCTCTGTGGCAACACCCTCACGTGATCGTTC 280791
| || |||||||| | ||| | | || | |||||| || ||| |||||||
Sbjct 102984 GTCAAAAGGTCAAGTTGGTCTTGGCTGCTTGTACCTGGCAAAGACCCCACCTGATCGTCT 102925
Query 280792 TCGACGAGCCTACCAACTATCTGGACCGCGAGAGCCTGGGCGCTCTG 280838
| |||||||||||||||||| ||||| | || |||||| ||| ||
Sbjct 102924 TGGACGAGCCTACCAACTATTTGGACAGAGACTCCCTGGGAGCTTTG 102878
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027834073984087
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |