Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016595.1_202016-02-08] 207 sequences; 9,358,152 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq27 95.1 2e-14 >seq27 Length=151803 Score = 95.1 bits (104), Expect = 2e-14 Identities = 135/188 (72%), Gaps = 3/188 (2%) Strand=Plus/Minus Query 279702 TCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGTGCC 279761 || ||||| ||||||||||||||||||||||| | || | ||| |||| ||| Sbjct 104056 TCCCTGTCTGGTGGTTGGAAGATGAAGCTGGCTTTGGCTAGAGCCGTTCTTAGAAATGCT 103997 Query 279762 GATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGGCTA 279821 || | || |||| ||||| ||||| ||||| ||||||| |||||| || ||| | Sbjct 103996 GACATTCTGTTGCTAGATGAACCAACTAACCATTTGGACACTGTCAACGTTGCTTGGTTG 103937 Query 279822 GTGTCCTACCTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCACGACTCTGGC 279881 || |||| | | | | || ||| || | ||| |||||||||| || |||||||| Sbjct 103936 GTCAACTACTTGAATACT-TGTGGAA--TTACATCCATCATTGTCTCCCATGACTCTGGT 103880 Query 279882 TTCCTAGA 279889 ||||| || Sbjct 103879 TTCCTGGA 103872 Score = 86.0 bits (94), Expect = 1e-11 Identities = 119/167 (71%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 280672 CCAAGCTGGGTCTGGACCCCGAGTTTACAACTCACTCTCGCATTCGCGGTCTTTCTGGAG 280731 ||| | |||||||||| | ||||| ||||||| || || | ||||| ||||| | Sbjct 103044 CCATGTTGGGTCTGGATGCTGAGTTGGTTTCTCACTCCCGTATCAGAGGTCTGTCTGGTG 102985 Query 280732 GCCAGAAGGTCAAACTTGTCATCGGAGCAGCTCTGTGGCAACACCCTCACGTGATCGTTC 280791 | || |||||||| | ||| | | || | |||||| || ||| ||||||| Sbjct 102984 GTCAAAAGGTCAAGTTGGTCTTGGCTGCTTGTACCTGGCAAAGACCCCACCTGATCGTCT 102925 Query 280792 TCGACGAGCCTACCAACTATCTGGACCGCGAGAGCCTGGGCGCTCTG 280838 | |||||||||||||||||| ||||| | || |||||| ||| || Sbjct 102924 TGGACGAGCCTACCAACTATTTGGACAGAGACTCCCTGGGAGCTTTG 102878 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027834073984087