Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016595.1_202016-02-08]
207 sequences; 9,358,152 total letters
Query= NC_023677.1
Length=153158
Score E
Sequences producing significant alignments: (Bits) Value
seq96 374 8e-99
seq91 143 3e-29
seq83 102 8e-17
>seq96
Length=585
Score = 374 bits (414), Expect = 8e-99
Identities = 239/260 (92%), Gaps = 0/260 (0%)
Strand=Plus/Minus
Query 48035 CCACCAGGATTTGCGGAACGCTGCTGACGCTGATGAGCGGGTCGCTACAGGGTCGCTCGC 48094
|| || |||| ||||| |||||| |||||||| | ||||||||||| ||||||||||||
Sbjct 559 CCCCCGGGATCTGCGGCACGCTGTTGACGCTGTTAAGCGGGTCGCTGCAGGGTCGCTCGG 500
Query 48095 TGTTCGAGGCCACGCGCGTCACCTTAATATGCGAAGTGGACCTCGGGCCGCGCCGCCCAG 48154
||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| |
Sbjct 499 TGTTCGAGGCCACACGCGTCACCTTAATATGCGAAGTGGACCTCGGACCGCGCCGCCCCG 440
Query 48155 ACTGCATCTGCGTGTTCGAATTCGCCAATGACAAGACGCTGGGAGGGGTGTGCGTCATCC 48214
||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||
Sbjct 439 ACTGCATCTGCGTGTTCGAATTCGCCAATGACAAGACGCTGGGCGGGGTTTGTGTCATCA 380
Query 48215 TCGAGCTAAAGACATGCAAATATATTTCTTCCGGGGACACGGCCAGCAAACGCGAACAAC 48274
| || ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||
Sbjct 379 TAGAACTAAAGACATGCAAATATATTTCTTCCGGGGACACCGCCAGCAAACGCGAGCAAC 320
Query 48275 GGACCACGGGGATGAAGCAG 48294
|| |||||||||||||||||
Sbjct 319 GGGCCACGGGGATGAAGCAG 300
>seq91
Length=783
Score = 143 bits (158), Expect = 3e-29
Identities = 133/166 (80%), Gaps = 2/166 (1%)
Strand=Plus/Minus
Query 46326 CGCCAAGAGTCCGCGCTGTGGGTCGCGGGCGTCGGGGGTGTTGGGCAACCACAGACGCCC 46385
||||| | ||||||| |||| | ||| |||||||||||| |||| ||||||||||||
Sbjct 287 CGCCAGAAATCCGCGCGGTGGTTTTTGGGGGTCGGGGGTGTTTGGCAGCCACAGACGCCC 228
Query 46386 GGTGTTTGTGTCGCGCCAGTACATGCGGGCCGCCCCCAGACCGTCCAAATACCACGGGTC 46445
|||||| ||||||||||||||||||||| || ||||| || |||||| |||| |||||
Sbjct 227 GGTGTTCGTGTCGCGCCAGTACATGCGGTCCATGCCCAGGCCATCCAAAAACCATGGGTC 168
Query 46446 GATTTGCTCCGTCCAATACGT-GTCATGGCCCCTGGCAACACCCAA 46490
| ||||| ||||| | ||| | | || |||| ||||| |||||
Sbjct 167 TGTCTGCTCAGTCCAGT-CGTGGACCTGACCCCACGCAACGCCCAA 123
>seq83
Length=928
Score = 102 bits (112), Expect = 8e-17
Identities = 124/166 (75%), Gaps = 6/166 (4%)
Strand=Plus/Plus
Query 46717 CGGTGGGGTGCTGATACGGTGCCAGCCCTGGACCCGAACCCCCGCGCGTATGGACACACC 46776
||||||||| || | ||||||||||||| ||||||||| ||| |||| ||| ||
Sbjct 35 CGGTGGGGTATCGACAGAGTGCCAGCCCTGGGACCGAACCCC-GCGTTTATGAACAAACG 93
Query 46777 ACACGACAACAATGCCTTTTATTCTGtttttttATTGCCGTCATCGCCGGGAGGCCTTCC 46836
|| | ||| | ||| ||||||||||| |||||||||||||||| || || ||||||
Sbjct 94 ACCCAACACCCGTGCGTTTTATTCTGTCTTTTTATTGCCGTCATAGCGCGGGTTCCTTCC 153
Query 46837 ----TTTTGGGCTTCCGTGTTTGAACTAAACTCCCCCCATCTCGCG 46878
|| | ||||||||||| | || || |||||||||| ||
Sbjct 154 GGTATTGTCTCCTTCCGTGTTTCAGTTAGCCT-CCCCCATCTCCCG 198
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 489976332182960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |