Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016595.1_202016-02-08] 207 sequences; 9,358,152 total letters Query= NC_023677.1 Length=153158 Score E Sequences producing significant alignments: (Bits) Value seq96 374 8e-99 seq91 143 3e-29 seq83 102 8e-17 >seq96 Length=585 Score = 374 bits (414), Expect = 8e-99 Identities = 239/260 (92%), Gaps = 0/260 (0%) Strand=Plus/Minus Query 48035 CCACCAGGATTTGCGGAACGCTGCTGACGCTGATGAGCGGGTCGCTACAGGGTCGCTCGC 48094 || || |||| ||||| |||||| |||||||| | ||||||||||| |||||||||||| Sbjct 559 CCCCCGGGATCTGCGGCACGCTGTTGACGCTGTTAAGCGGGTCGCTGCAGGGTCGCTCGG 500 Query 48095 TGTTCGAGGCCACGCGCGTCACCTTAATATGCGAAGTGGACCTCGGGCCGCGCCGCCCAG 48154 ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| | Sbjct 499 TGTTCGAGGCCACACGCGTCACCTTAATATGCGAAGTGGACCTCGGACCGCGCCGCCCCG 440 Query 48155 ACTGCATCTGCGTGTTCGAATTCGCCAATGACAAGACGCTGGGAGGGGTGTGCGTCATCC 48214 ||||||||||||||||||||||||||||||||||||||||||| ||||| || |||||| Sbjct 439 ACTGCATCTGCGTGTTCGAATTCGCCAATGACAAGACGCTGGGCGGGGTTTGTGTCATCA 380 Query 48215 TCGAGCTAAAGACATGCAAATATATTTCTTCCGGGGACACGGCCAGCAAACGCGAACAAC 48274 | || ||||||||||||||||||||||||||||||||||| |||||||||||||| |||| Sbjct 379 TAGAACTAAAGACATGCAAATATATTTCTTCCGGGGACACCGCCAGCAAACGCGAGCAAC 320 Query 48275 GGACCACGGGGATGAAGCAG 48294 || ||||||||||||||||| Sbjct 319 GGGCCACGGGGATGAAGCAG 300 >seq91 Length=783 Score = 143 bits (158), Expect = 3e-29 Identities = 133/166 (80%), Gaps = 2/166 (1%) Strand=Plus/Minus Query 46326 CGCCAAGAGTCCGCGCTGTGGGTCGCGGGCGTCGGGGGTGTTGGGCAACCACAGACGCCC 46385 ||||| | ||||||| |||| | ||| |||||||||||| |||| |||||||||||| Sbjct 287 CGCCAGAAATCCGCGCGGTGGTTTTTGGGGGTCGGGGGTGTTTGGCAGCCACAGACGCCC 228 Query 46386 GGTGTTTGTGTCGCGCCAGTACATGCGGGCCGCCCCCAGACCGTCCAAATACCACGGGTC 46445 |||||| ||||||||||||||||||||| || ||||| || |||||| |||| ||||| Sbjct 227 GGTGTTCGTGTCGCGCCAGTACATGCGGTCCATGCCCAGGCCATCCAAAAACCATGGGTC 168 Query 46446 GATTTGCTCCGTCCAATACGT-GTCATGGCCCCTGGCAACACCCAA 46490 | ||||| ||||| | ||| | | || |||| ||||| ||||| Sbjct 167 TGTCTGCTCAGTCCAGT-CGTGGACCTGACCCCACGCAACGCCCAA 123 >seq83 Length=928 Score = 102 bits (112), Expect = 8e-17 Identities = 124/166 (75%), Gaps = 6/166 (4%) Strand=Plus/Plus Query 46717 CGGTGGGGTGCTGATACGGTGCCAGCCCTGGACCCGAACCCCCGCGCGTATGGACACACC 46776 ||||||||| || | ||||||||||||| ||||||||| ||| |||| ||| || Sbjct 35 CGGTGGGGTATCGACAGAGTGCCAGCCCTGGGACCGAACCCC-GCGTTTATGAACAAACG 93 Query 46777 ACACGACAACAATGCCTTTTATTCTGtttttttATTGCCGTCATCGCCGGGAGGCCTTCC 46836 || | ||| | ||| ||||||||||| |||||||||||||||| || || |||||| Sbjct 94 ACCCAACACCCGTGCGTTTTATTCTGTCTTTTTATTGCCGTCATAGCGCGGGTTCCTTCC 153 Query 46837 ----TTTTGGGCTTCCGTGTTTGAACTAAACTCCCCCCATCTCGCG 46878 || | ||||||||||| | || || |||||||||| || Sbjct 154 GGTATTGTCTCCTTCCGTGTTTCAGTTAGCCT-CCCCCATCTCCCG 198 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 489976332182960