Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016605.1_202016-02-08] 180 sequences; 9,359,306 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq29 113 1e-19 >seq29 Length=152007 Score = 113 bits (124), Expect = 1e-19 Identities = 178/255 (70%), Gaps = 0/255 (0%) Strand=Plus/Plus Query 319776 AATGAAGTCAATGATAGCCGTGTTAGAATCGGACCCGTCGAGATCGTGTTCCACGTAAGC 319835 ||||||||||| | | |||| | || || || |||| ||||| || ||||| | Sbjct 104168 AATGAAGTCAACAGTGGAGGTGTCGGCTTCAGAACCATCGATGTCGTGCTCGACGTAGAC 104227 Query 319836 AGTTTTCAAAACATCCGCAGAGGGGAACCCTTCAAGCTGGCCGTTCACAATAGCGCGCAT 319895 |||| | | |||| ||| ||||| || |||| || ||||| ||||||| | ||| Sbjct 104228 AGTTCTACATTCATCTTGAGATGGGAAGCCCTCAACTTGACCGTTGGCAATAGCTCTCAT 104287 Query 319896 CAGGGTTGATTTACCCGCCCCGTTTGGCCCACACAGACCGTAGCGGTTTCCGCGTTTCAG 319955 || ||||| ||||| || ||||| || ||||| ||||| || || | | | |||| Sbjct 104288 CAAAGTTGACTTACCAGCACCGTTAGGACCACAGAGACCATAACGTCTAGCTCTCTTCAA 104347 Query 319956 GTTGAACCGCGTGTTGTTCAGAAGAATTTTTCCACCATATGCCAGAGAAAATTCACAATC 320015 ||| | || |||||||| | || || |||| || ||||| || || ||||| | Sbjct 104348 ACGGAATTGAGTCTTGTTCAGCAAGATCTTAGCACCGTAAGCCAGGGAGAACTCACAGTT 104407 Query 320016 ACACAGATCCTCACC 320030 ||| ||||| ||||| Sbjct 104408 ACATAGATCTTCACC 104422 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057821560393400