Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016605.1_202016-02-08]
180 sequences; 9,359,306 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq28 201 1e-46
>seq28
Length=541666
Score = 201 bits (222), Expect = 1e-46
Identities = 475/708 (67%), Gaps = 16/708 (2%)
Strand=Plus/Minus
Query 16674 TTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCT 16733
|||||||||| ||| | |||||||| ||||| ||||| || | | ||| || ||||
Sbjct 325622 TTTGGTAATCAGAAACTCTCTTTTCGAAGAAGTTGGTTTTACCGGCCAAAGAAATGTTCT 325563
Query 16734 CCATGAAATCAAAAGGATTAGTAGC--TGAAAATATTTTAGAGTACCCCAGTTCGGCGAT 16791
||||||| ||||| ||||| | | || | | |||| | | ||||| | | |
Sbjct 325562 CCATGAAGTCAAATGGATTGTTGACGTTGTACACCTTTTTG--TTGCCCAGAGCTACCAG 325505
Query 16792 TAATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTA-TAA 16850
|| ||| || || || || || | ||| |||||||| || ||||||||| || | |||
Sbjct 325504 TAGTCTGTCAGCAACGAACTCAACATACTGGCACATCAAGCTGCAGTTCATCCCCAGTAA 325445
Query 16851 GACGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAA 16910
| | || |||||||| || || || | | || || || | || || || | ||||
Sbjct 325444 GGAG-ACAGGAAGAGCGTCTGTGAAGTACCTTTTTTCGATCTCGACAGCCTCTGTGATAA 325386
Query 16911 TACTAGCAACTCGTTCCTCGGACGGTGTAT-GTTTAAGATGTTTAAACATCAGACATGCG 16969
| | |||| |||||| | | ||| |||||| ||| ||| | || || ||
Sbjct 325385 TCTTTTCAACGATTTCCTCACTGGCTCTATTGTTTAA-ATGAGAAAATAGCAAGCAAGCA 325327
Query 16970 AAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGC 17029
|| || ||||||||||||||||||| ||||| || || || || ||||| || |||
Sbjct 325326 AAGTCAGTGTGTAATCCCTCGTCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCTGGC 325267
Query 17030 ATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCC 17089
|| |||| ||||| ||||| || || | || || || || |||||||| ||||||
Sbjct 325266 ATGAGACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAAGATCCTGAAAAGAAGATACCC 325207
Query 17090 TCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCAT 17149
|| || | || || || | || ||||| ||| || || || | | | |||||||
Sbjct 325206 TCAACAGCAGCGAAGGCAACCAAACGTTCAGCGAACAATGCATCGTCATCAGAAATCCAT 325147
Query 17150 TTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATA-- 17207
|| |||| || || |||| || || || || || || ||||| || || |
Sbjct 325146 CTCATGGCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTCGATGGCATTGAACAGG 325087
Query 17208 ATTTC--TCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTC 17265
| ||| || ||| | | || | || || ||||| || || | | ||| | ||
Sbjct 325086 AATTCAGACTCTTT----TGGATCTTTGATGTAAGTATCAATCAGCAAGGAGTAAGTCTC 325031
Query 17266 GGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTG 17325
|||||| ||||||||||| ||||| || |||||||||||| ||||| | | |||
Sbjct 325030 GGAGTGAATGTTCTCCATCATGATCTGGAAACCGTAAAAGCATTTTGCTTCGGGAAGTTG 324971
Query 17326 AACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTC 17373
||| || | ||| |||| | | ||||| || || || |||||
Sbjct 324970 AACCTCAGCACTGAAATTTTCCACCAAGTTTTCATTGACAATACCGTC 324923
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517544435522400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |