Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016605.1_202016-02-08] 180 sequences; 9,359,306 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq15 336 3e-87 seq28 158 1e-33 >seq15 Length=271170 Score = 336 bits (372), Expect = 3e-87 Identities = 1320/2073 (64%), Gaps = 37/2073 (2%) Strand=Plus/Plus Query 52797 CCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTC 52856 ||||||| | ||| || ||||||| ||| | || | || ||||| || |||||||| | Sbjct 87848 CCTTGTCAACTGTAAACTGAATGGCAGCAGCGGCAGCTTGAGTACGCAGGTAGTACATAC 87907 Query 52857 CCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCG 52916 | || |||| || |||| || ||||| |||||||| || | ||| | | | Sbjct 87908 CAGTCTTTAATCCTTTCTTCCAACCATAAAAGTGCATACTGGTCAATTTACCCATAGTTG 87967 Query 52917 GATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAG 52976 || | | || || |||| || ||| ||||||||| ||||| || || |||| Sbjct 87968 GAGCCATCAGGTGAATGTTCAACGACTGAGATTGATCGATATAGGCTGATCTATCGGCAG 88027 Query 52977 CCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATAT 53036 |||| | || || |||||||| | ||| ||||||| ||| || |||| | |||| | Sbjct 88028 CCATATCAATAATAGTCTTTTGAGAAATCTCCCAAACAGTCTTGTAAAGGCCTTTAAGTT 88087 Query 53037 CTTCTGGAAGGTTTGT---ATTCTGAATAGATCCACCATCTACCATAATCCTATTCTTGA 53093 || || | ||| | ||| |||||||| || ||| || || ||| || | Sbjct 88088 GCTCAGGTATGTTGGGCAAATTTTGAATAGAGCCGTTGTCTGAAATGATATGATTTTTCA 88147 Query 53094 TCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTT 53153 | | ||| | ||| | || || | | | | | | |||||||| | || Sbjct 88148 TGTTATCGTCCCAAAGACCCAAATCCACTAGATCACGCAATAAGTAAGGATTAACAATTT 88207 Query 53154 GAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACT 53213 |||||||||||| ||||| | || | ||| || || || || ||||| | | ||| Sbjct 88208 GAAATTCTCCAGCTAATACACGGCGTGAGTAGATGTTGGAAGTGTAAGGTTCGAAACACT 88267 Query 53214 CATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTAT 53273 | || | |||| |||||| | |||||| ||||| ||||||||||| || | || | Sbjct 88268 CGTTGTAACCCAGAATTTGGGAAGTTGAAGCAGTGGGCATAGGTGCAACTAGCAACGAGT 88327 Query 53274 TTCTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACG 53333 |||| | ||| | || || |||| || | |||||| | ||| || || || | Sbjct 88328 TTCTTAAACCTGTGGAAACAATCTTGGCTTTGAGTGATTCCCATTCCCACAGCTCAGAGG 88387 Query 53334 GTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATG 53393 | ||| | ||| || | | || || ||| | | Sbjct 88388 GCTTCTTGTCCCACAAGTCATATTGCAAAATGCCCTGAGATGCTGGAGAACCTTGGAAGG 88447 Query 53394 TATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAA 53453 | ||||| | |||||| | | |||| ||| || || || || | | || | Sbjct 88448 TTTCGTAGGCTCCTTCTTCGACGGCTAATTCGTTGGAGGCTTCCAAAGCTGCATGGTAGA 88507 Query 53454 TGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTA 53513 | ||||| || |||| |||| || | || ||||| | |||||| ||| | | Sbjct 88508 TAGTTTCAAAAATCTGAATATTAAGCTGTTTGGCTTCTGGAGAATCAAAAGGAATTCTCA 88567 Query 53514 AGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTAT 53573 | ||||| || || ||||| ||||||||||| | | | |||||||||| | | ||| Sbjct 88568 ACTTCATAAAAGCATCAGCTAAACCTTGAACACCCACAGCTATAGGTCTATTACGCATAT 88627 Query 53574 TAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGGTTTC 53633 | || | ||||||||||| || ||| |||| | || |||||| | || | ||| | Sbjct 88628 TCGATCTCCTAGCTTCTGGAACGGGGTAAAAATTTCTGTCGATAATTCTGTTCAAGTTAC 88687 Query 53634 TGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAAT--------CAAATTGTC-CAT 53684 || |||||| | || | ||| || ||| | || || ||| Sbjct 88688 GAGTAACCACTTTGGTGATTTCATGCAGCTTTTCAAAGTTGTACCAGCAGTGAGTATCAT 88747 Query 53685 CTATTACAAACATG--TTCAAT-GCAATAGATGCCAGATTACAAACGGCTACCTCATTAG 53741 | || ||| | | | || |||||||| |||| ||||| || || ||| | | Sbjct 88748 CGGTTTCAACAAAGGCTGGAAGAGCAATAGAAGCCAAGTTACAGACAGCAGTCTCTTCCG 88807 Query 53742 CATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTT 53801 | |||| | || ||| |||||| ||| | || ||| || || || | Sbjct 88808 GGGAAGAGTATTCAACAATTTCACAGCAAAGGTTAGAGGATTTAATGACACCCAAGTTCT 88867 Query 53802 GTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAA 53861 || ||| | ||||||||||| ||||||||||| || |||||||| ||||||||||| Sbjct 88868 TCTGGTTAGTTTTTTTGTTACAAGCATCCTTATACAGCATGAATGGAGTACCAGTTTCTG 88927 Query 53862 TCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGATTTGTATCTCT 53921 | || | || | || || | ||| | | || || || | ||||| | | Sbjct 88928 TTTGTGCCTCAAGGATGGCGTACCAAAGCTTTTGGGCTTTGAT----GGTTTGTCTTCCA 88983 Query 53922 T----TTCTCTTTCGTATAGTGTATACAATCGTTCAAACTCGTCTCCCCAAACATTGTCC 53977 ||| |||||||| | |||||| ||||| || ||||| | || | | | Sbjct 88984 CGACCTTCCTTTTCGTATCTTTCGTACAATTCCTCAAATTCATCTCCATAGACGTCGGCA 89043 Query 53978 AATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTC 54037 | |||||| |||| ||| | | || | ||| || || | | | |||| |||| Sbjct 89044 AGGCCAGGAGCTTCACTTGGAGAGAACAGGGTCCAATCGCCATTCTGTTCTACTCTTTTC 89103 Query 54038 ATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTT 54097 || || |||||||| ||||| | ||| |||| ||||| | ||| ||||| || Sbjct 89104 ATGAACAGATCAGGGATCCACAAAGCGGGGAATAAGTCTCTAGCTCTGATCTCCTCTTTA 89163 Query 54098 CCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTAT 54157 || ||||| || ||| | ||| || | || || | |||||| || |||||||| Sbjct 89164 CCATGGTTCTTACGAATATCAATGAAGGCAAAGATGTCGGCATGCCATGGCTCCAAGTAC 89223 Query 54158 ATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTA 54217 | | | | ||||| |||||||| || || || || | || | ||| ||||| || Sbjct 89224 AAAGCAAATGCACCAGGACGTTTGTTACCACCTTGGTCAACATAACGAGCAGTGTTGTTG 89283 Query 54218 TAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTT 54277 | || |||| |||||||||||||||||| || | ||| || || || | || ||| | Sbjct 89284 AAGACCCTCACCATTGGAATAATACCATTCGAAGTACCGTTAGTACCAGCAATGTAGGAT 89343 Query 54278 CCACTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAAT 54337 || |||||||||||||| ||| | ||| || || || || |||| |||||||| Sbjct 89344 CCTGTGGCACGAATATTATGAATGTGCAAACCAATTCCACCAGCAGTTTTGGAGATTAAA 89403 Query 54338 GCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGA 54397 || ||| || || ||||| || ||||| || || |||||| |||| || || Sbjct 89404 GCACATTCCTTCAAAGTATCGTAAATGCCTTCAATTGAGTCATCCCGCATGGCAACTAAG 89463 Query 54398 AAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGC 54457 ||||| |||||||| | || || || || ||||| | |||||||| || || Sbjct 89464 AAACATGATGACATTTGTGGGTGAGGGGTACCAGCGTTAAACAGAGTAGGAGAGGCATGA 89523 Query 54458 GTAAACCATTT----TTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCCCA 54513 || || | || ||| |||| || || || || ||| || | || || Sbjct 89524 GTGAAATACTTCTGACTCATAAAG----TTATAAGTTTCAATAACTCTTGCAATGTCATC 89579 Query 54514 TTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTT 54573 |||||| || | || |||||||| | || ||| ||||| | ||| | | || Sbjct 89580 ACCATGAATGCCGATAGCAACACGCATAATCAAGTGTTGAGGACGTTCTGCAACATTACC 89639 Query 54574 GTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAA 54633 || ||| |||| | ||| ||| ||||||| || || || ||||| ||||| || ||| Sbjct 89640 ATTAATTCTCAGAAGGTAAGATCTTTCCAAGGTCTTGAATCCAAAGTAGTTATACTGAAA 89699 Query 54634 GTCTCGTTCGTAAATAATAACTGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCAT 54693 ||||| ||||| | |||| | ||||| || | ||| | ||| | || | | | Sbjct 89700 GTCTCTATCGTAGACAATAGCAGAGTTCAGCTCATCAGCGTGTTTCTGGACAATGT---T 89756 Query 54694 GGTAAT-ACTT--GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTAAA 54750 | | | ||| |||| | ||||| ||||| || || || || |||| || | | | Sbjct 89757 GTAAGTGTCTTCAGAAACCAGAGGAGAGTGTTTTCCGTTCTTTGGGTTGATGTATTCATA 89816 Query 54751 TAAATCCTTCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGC 54810 || || || | || | | || | || | || | |||||||| ||| || || || Sbjct 89817 CAACTCTTTGGTTACCTGAGAGTATTGCTTAGTGGTCTGTTTGTGTAAATTGGAAACAGC 89876 Query 54811 TATTCTAGCGGCTAGAATGGCATAATCCGGATG 54843 ||||| || || | |||||||||||| || || Sbjct 89877 AATTCTTGCTGCCAAAATGGCATAATCGGGGTG 89909 >seq28 Length=541666 Score = 158 bits (174), Expect = 1e-33 Identities = 561/862 (65%), Gaps = 16/862 (2%) Strand=Plus/Minus Query 23844 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 23903 |||||||| ||| || | |||||||| || || |||||||| | || || || || Sbjct 325623 TTTTGGTAATCAGAAACTCTCTTTTCGAAGAAGTTGGTTTTACCGGCCAAAGAAATGTTC 325564 Query 23904 TCCATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAATCCCAATTCAGAAATC 23963 |||||||| || |||||||| | || || || | |||| |||| | | Sbjct 325563 TCCATGAAGTCAAATGGATTGTTGACGTTGTACACCTTTTTGTTGCCCAGAGCTACCAGT 325504 Query 23964 AATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAATTCATTCCTA-TAAG 24022 | ||| || || || ||||| | ||| ||||| || ||||| || | |||| Sbjct 325503 AGTCTGTCAGCAACGAACTCAACATACTGGCACATCAAGCTGCAGTTCATCCCCAGTAAG 325444 Query 24023 TTTAACTGGAAGAGCCACAGT-AAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAA 24081 | | |||||||| | || ||| | | || ||| || ||| || ||||| |||| Sbjct 325443 GAGA-CAGGAAGAGCGTCTGTGAAGTACCTTTT-TTCGATCTCGACAGCCTCTGTGATAA 325386 Query 24082 TAGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGA 24141 | | || |||| ||||| | | || |||||| ||| | ||| || || | Sbjct 325385 TCTTTTCAACGATTTCCTCACTGGCTCTATTGTTTAAATGAGAAAATAGCAAGCAAGCAA 325326 Query 24142 AATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCA 24201 | || ||||| ||||||||||| | ||| | || ||||| || || | || |||| Sbjct 325325 AGTCAGTGTGTAATCCCTCGTCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCTGGCA 325266 Query 24202 TTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTT 24261 | || || | ||| || | ||| || || || ||||| ||||| |||||||| || || | Sbjct 325265 TGAGACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAAGATCCTGAAAAGAAGATACCCT 325206 Query 24262 CTACTGCCGCAAAGGCAATAAGTCTTTCTCC--ATAA-CCGGCGCTGTCATGTATCCA-C 24317 | || || || ||||||| | | ||| | | || | || ||| ||||| | Sbjct 325205 CAACAGCAGCGAAGGCAACCAAACGTTCAGCGAACAATGCATCGTCATCAGAAATCCATC 325146 Query 24318 TTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGA 24377 | || ||||| || ||||| | ||| | ||| || || ||||| || ||||| || || Sbjct 325145 TCATG-GCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTCGATGGCATTGAACAGG 325087 Query 24378 TAGtttttttCATTACTATCTTTAACATATGTATCAATCA--AAAGACTATACATTTCCG 24435 | | || || |||||| | || |||||||||| || || || | || | Sbjct 325086 AATTCAGACTCTTTTGGATCTTTGATGTAAGTATCAATCAGCAAGGA--GTAAGTCTCGG 325029 Query 24436 AATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTA 24495 | |||||||| || || || || || ||||| || ||| | || |||| || || | Sbjct 325028 AGTGAATGTTCTCCATCATGATCTGGAAACCGTAAAAGCATTTTGCTTCGGGAAGTTGAA 324969 Query 24496 CTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAA 24555 | || || || ||| | || |||||||| || || |||||| ||| ||||| | Sbjct 324968 CCTCAGCACTGAAATTTTCCACCAAGTTTTCATTGACAATACCGTCAGAGGCAGCAAAGA 324909 Query 24556 ACGCCAATACATGTTTTATAAAATATTTTTC-GTCTGGT--GTTAGTTTATTCCAATCAT 24612 | || | || || || ||||||| | | || | | |||||||| |||| Sbjct 324908 AGGCAAGGACTCTCGAGATGAAGAATTTTTCATTATCGTTCATACGATTATTCCAGTCAT 324849 Query 24613 TGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTAT 24672 | ||| ||| | || | ||| || | |||||||| || || || |||| || | Sbjct 324848 GCAAATCCTTACCCAGGTCTATTTCCTCAGCAGTCCAAAAGGAAGCTTCGGCCTGCTTGT 324789 Query 24673 ACATATTCCAGATGTCATGATA 24694 |||| | |||||| || || || Sbjct 324788 ACATTTGCCAGATATCGTGGTA 324767 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593720264126400