Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016605.1_202016-02-08]
180 sequences; 9,359,306 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq28 136 8e-27
seq15 98.7 2e-15
>seq28
Length=541666
Score = 136 bits (150), Expect = 8e-27
Identities = 313/467 (67%), Gaps = 17/467 (4%)
Strand=Plus/Plus
Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977
|||||||| ||||| ||||| || ||||||||| || | || || || || ||||||
Sbjct 325187 GTTGCCTTCGCTGCTGTTGAGGGTATCTTCTTTTCAGGATCTTTTGCTTCTATCTTCTGG 325246
Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037
| ||||| || ||| | |||| ||| | |||| |||||||||| | |||| || |||
Sbjct 325247 TTGAAGAAGAGAGGTCTCATGCCAGGTTTGACCTTCTCCAATGAGCTTATTTGCAGAGAC 325306
Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCCCA 102097
|| || | || |||||||| ||| |||| || | | || | || |
Sbjct 325307 GAGGGATTACACACTGACTTTGCTTGCTTGCTATTT--------TCTCATTTAAACA--A 325356
Query 102098 TCAAG--AGAAAGGAT-TC-TTGAAA---TTGTCACTGAAGCCGTCCGAATTGAACAAGA 102150
| || || |||| || |||||| || |||| || || ||| || ||| ||
Sbjct 325357 TAGAGCCAGTGAGGAAATCGTTGAAAAGATTATCACAGAGGCTGTCGAGATCGAAAAAAG 325416
Query 102151 ATTTCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCA 102210
| |||||| | || ||||| ||| |||| |||||||||| |||||| ||||
Sbjct 325417 GTACTTCACAGACGCTCTTCCTGTCTCCTTACTGGGGATGAACTGCAGCTTGATGTGCCA 325476
Query 102211 GTACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAGCACTATAA 102270
||| |||| || || || || | |||| |||| | |||| ||||| || ||
Sbjct 325477 GTATGTTGAGTTCGTTGCTGACAGACTACTGGTAGCTCTGGGCAACAAAAAGGTGTACAA 325536
Query 102271 TGTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTT 102330
|| | ||| || || |||||||| || ||||| | | ||| |||||||| ||
Sbjct 325537 CGTCAACAATCCATTTGACTTCATGGAGAACATTTCTTTGGCCGGTAAAACCAACTTCTT 325596
Query 102331 TGAAAAGAGAGTCGCCGAGTATCAACGTGCCCAGGTCATGGCTTCTA 102377
||||||||||| | || || ||| || |||||||||||||
Sbjct 325597 CGAAAAGAGAGTTTCTGATTACCAAAAGGCAGGTGTCATGGCTTCTA 325643
>seq15
Length=271170
Score = 98.7 bits (108), Expect = 2e-15
Identities = 186/271 (69%), Gaps = 2/271 (1%)
Strand=Plus/Plus
Query 94770 ATCATGAAAGTGGATGCCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAG 94829
|| ||||| ||| | || | ||| |||||||| |||||||| | || ||||| |
Sbjct 89358 ATTATGAATGTGCAAACCAATTCCACCAGCAGTTTTGGAGATTAAAGCACATTCCTTCAA 89417
Query 94830 AGTATCATAAATACCCTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAG 94889
|||||| ||||| || ||||| ||||| | | | | | | ||| || || || |
Sbjct 89418 AGTATCGTAAATGCCTTCAATTGAGTCATCCCGCATGGCAACTAAGAAACATGATGACAT 89477
Query 94890 TTGGGGTGTGACTGTT-CCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCC 94948
||| || |||| | | ||| |||||||| || || || ||||| || ||||| | |
Sbjct 89478 TTGTGG-GTGAGGGGTACCAGCGTTAAACAGAGTAGGAGAGGCATGAGTGAAATACTTCT 89536
Query 94949 TCGACATGAGATCATATGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAG 95008
||| | | ||| |||||||| || | ||||| || |||||||||| ||
Sbjct 89537 GACTCATAAAGTTATAAGTTTCAATAACTCTTGCAATGTCATCACCATGAATGCCGATAG 89596
Query 95009 CCACACGCATAATCATGTCCTGAGGGCGCTC 95039
| ||||||||||||| || ||||| || ||
Sbjct 89597 CAACACGCATAATCAAGTGTTGAGGACGTTC 89627
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989581717771900
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |