Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016605.1_202016-02-08] 180 sequences; 9,359,306 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq28 136 8e-27 seq15 98.7 2e-15 >seq28 Length=541666 Score = 136 bits (150), Expect = 8e-27 Identities = 313/467 (67%), Gaps = 17/467 (4%) Strand=Plus/Plus Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977 |||||||| ||||| ||||| || ||||||||| || | || || || || |||||| Sbjct 325187 GTTGCCTTCGCTGCTGTTGAGGGTATCTTCTTTTCAGGATCTTTTGCTTCTATCTTCTGG 325246 Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037 | ||||| || ||| | |||| ||| | |||| |||||||||| | |||| || ||| Sbjct 325247 TTGAAGAAGAGAGGTCTCATGCCAGGTTTGACCTTCTCCAATGAGCTTATTTGCAGAGAC 325306 Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCCCA 102097 || || | || |||||||| ||| |||| || | | || | || | Sbjct 325307 GAGGGATTACACACTGACTTTGCTTGCTTGCTATTT--------TCTCATTTAAACA--A 325356 Query 102098 TCAAG--AGAAAGGAT-TC-TTGAAA---TTGTCACTGAAGCCGTCCGAATTGAACAAGA 102150 | || || |||| || |||||| || |||| || || ||| || ||| || Sbjct 325357 TAGAGCCAGTGAGGAAATCGTTGAAAAGATTATCACAGAGGCTGTCGAGATCGAAAAAAG 325416 Query 102151 ATTTCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCA 102210 | |||||| | || ||||| ||| |||| |||||||||| |||||| |||| Sbjct 325417 GTACTTCACAGACGCTCTTCCTGTCTCCTTACTGGGGATGAACTGCAGCTTGATGTGCCA 325476 Query 102211 GTACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAGCACTATAA 102270 ||| |||| || || || || | |||| |||| | |||| ||||| || || Sbjct 325477 GTATGTTGAGTTCGTTGCTGACAGACTACTGGTAGCTCTGGGCAACAAAAAGGTGTACAA 325536 Query 102271 TGTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTT 102330 || | ||| || || |||||||| || ||||| | | ||| |||||||| || Sbjct 325537 CGTCAACAATCCATTTGACTTCATGGAGAACATTTCTTTGGCCGGTAAAACCAACTTCTT 325596 Query 102331 TGAAAAGAGAGTCGCCGAGTATCAACGTGCCCAGGTCATGGCTTCTA 102377 ||||||||||| | || || ||| || ||||||||||||| Sbjct 325597 CGAAAAGAGAGTTTCTGATTACCAAAAGGCAGGTGTCATGGCTTCTA 325643 >seq15 Length=271170 Score = 98.7 bits (108), Expect = 2e-15 Identities = 186/271 (69%), Gaps = 2/271 (1%) Strand=Plus/Plus Query 94770 ATCATGAAAGTGGATGCCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAG 94829 || ||||| ||| | || | ||| |||||||| |||||||| | || ||||| | Sbjct 89358 ATTATGAATGTGCAAACCAATTCCACCAGCAGTTTTGGAGATTAAAGCACATTCCTTCAA 89417 Query 94830 AGTATCATAAATACCCTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAG 94889 |||||| ||||| || ||||| ||||| | | | | | | ||| || || || | Sbjct 89418 AGTATCGTAAATGCCTTCAATTGAGTCATCCCGCATGGCAACTAAGAAACATGATGACAT 89477 Query 94890 TTGGGGTGTGACTGTT-CCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCC 94948 ||| || |||| | | ||| |||||||| || || || ||||| || ||||| | | Sbjct 89478 TTGTGG-GTGAGGGGTACCAGCGTTAAACAGAGTAGGAGAGGCATGAGTGAAATACTTCT 89536 Query 94949 TCGACATGAGATCATATGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAG 95008 ||| | | ||| |||||||| || | ||||| || |||||||||| || Sbjct 89537 GACTCATAAAGTTATAAGTTTCAATAACTCTTGCAATGTCATCACCATGAATGCCGATAG 89596 Query 95009 CCACACGCATAATCATGTCCTGAGGGCGCTC 95039 | ||||||||||||| || ||||| || || Sbjct 89597 CAACACGCATAATCAAGTGTTGAGGACGTTC 89627 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989581717771900