Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016605.1_202016-02-08]
180 sequences; 9,359,306 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq15 311 1e-79
seq28 170 2e-37
>seq15
Length=271170
Score = 311 bits (344), Expect = 1e-79
Identities = 1211/1903 (64%), Gaps = 45/1903 (2%)
Strand=Plus/Plus
Query 62035 CCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTC 62094
||||||| | ||| || ||||||| ||| | || | || ||||| || |||||||| |
Sbjct 87848 CCTTGTCAACTGTAAACTGAATGGCAGCAGCGGCAGCTTGAGTACGCAGGTAGTACATAC 87907
Query 62095 CCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCG 62154
| || |||| || |||| || ||||| |||||||| || | ||| | | |
Sbjct 87908 CAGTCTTTAATCCTTTCTTCCAACCATAAAAGTGCATACTGGTCAATTTACCCATAGTTG 87967
Query 62155 GATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAG 62214
|| | | || || |||| || ||| ||||||||| ||||| || || ||||
Sbjct 87968 GAGCCATCAGGTGAATGTTCAACGACTGAGATTGATCGATATAGGCTGATCTATCGGCAG 88027
Query 62215 CCATTTTTATGATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATAAACTCGCTTAATAT 62274
|||| | || || |||||||| | ||| ||||||| ||| || |||| | |||| |
Sbjct 88028 CCATATCAATAATAGTCTTTTGAGAAATCTCCCAAACAGTCTTGTAAAGGCCTTTAAGTT 88087
Query 62275 CTTCTGGAAGGTTTGT---ATTCTGAATGGATCCACCATCTACCATAATCCTATTCTTGA 62331
|| || | ||| | ||| ||||| || || ||| || || ||| || |
Sbjct 88088 GCTCAGGTATGTTGGGCAAATTTTGAATAGAGCCGTTGTCTGAAATGATATGATTTTTCA 88147
Query 62332 TCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGGTTAACTACTT 62391
| | ||| | ||| | || || | | | | | | || ||||| | ||
Sbjct 88148 TGTTATCGTCCCAAAGACCCAAATCCACTAGATCACGCAATAAGTAAGGATTAACAATTT 88207
Query 62392 GGAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACT 62451
| |||||||||| ||||| | || | ||| || || || || ||||| | |||
Sbjct 88208 GAAATTCTCCAGCTAATACACGGCGTGAGTAGATGTTGGAAGTGTAAGGTTCGAAACACT 88267
Query 62452 CATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTAT 62511
| || | |||| |||||| | |||||| ||||| ||||||||||| || | || |
Sbjct 88268 CGTTGTAACCCAGAATTTGGGAAGTTGAAGCAGTGGGCATAGGTGCAACTAGCAACGAGT 88327
Query 62512 TTCTAAGACCGTATGTTCTGATTTTATCTTTTAGATGTTCCCAATTCCAAAGATCCGACG 62571
|||| | ||| | || || |||| || |||||| | ||| || || || |
Sbjct 88328 TTCTTAAACCTGTGGAAACAATCTTGGCTTTGAGTGATTCCCATTCCCACAGCTCAGAGG 88387
Query 62572 G-------TACAACANNNNNNNNNNNATATTGTAGAATACCGTTACTGGCGTACGATCCT 62624
| | | ||| |||||| | ||| || | | || || |||
Sbjct 88388 GCTTCTTGTCCCACAAGTC-------ATATTGCAAAATGCCCTGAGATGCTGGAGAACCT 88440
Query 62625 ACATATGTATCATATGGTCCTTCCTTCTCAGCTAGTTTACAACTCGCCTCTAATGCACCG 62684
| || || || | |||||| | | |||| || || || || || |
Sbjct 88441 TGGAAGGTTTCGTAGGCTCCTTCTTCGACGGCTAATTCGTTGGAGGCTTCCAAAGCTGCA 88500
Query 62685 TAATAAATGGTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCAAATGGA 62744
| || || |||||||| |||| |||| || | || ||||| || |||||| |||
Sbjct 88501 TGGTAGATAGTTTCAAAAATCTGAATATTAAGCTGTTTGGCTTCTGGAGAATCAAAAGGA 88560
Query 62745 TAATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGT 62804
| || ||||| || || ||||| ||||||||||| | | | ||||||||||
Sbjct 88561 ATTCTCAACTTCATAAAAGCATCAGCTAAACCTTGAACACCCACAGCTATAGGTCTATTA 88620
Query 62805 CTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTG 62864
| | |||| || | ||||||||||| || ||| |||| | || |||||| | ||
Sbjct 88621 CGCATATTCGATCTCCTAGCTTCTGGAACGGGGTAAAAATTTCTGTCGATAATTCTGTTC 88680
Query 62865 AGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCC----- 62919
| || | || |||||| | || | ||| || ||| | | | |
Sbjct 88681 AAGTTACGAGTAACCACTTTGGTGATTTCATGCAGCTTTTCAAAGTTGTACCAGCAGTGA 88740
Query 62920 ----CATCTATTACAAACATG--TTCAAT-GCAACAGATGCCAGATTACACACGGCTACC 62972
|||| || ||| | | | || |||| ||| |||| ||||| || || |
Sbjct 88741 GTATCATCGGTTTCAACAAAGGCTGGAAGAGCAATAGAAGCCAAGTTACAGACAGCAGTC 88800
Query 62973 TCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCT 63032
|| | | | |||| | || ||| |||||| ||| | || || ||
Sbjct 88801 TCTTCCGGGGAAGAGTATTCAACAATTTCACAGCAAAGGTTAGAGGATTTAATGACACCC 88860
Query 63033 AAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCA 63092
|| || | || ||| | ||||||||||| ||||||||||| || |||||||||||||||
Sbjct 88861 AAGTTCTTCTGGTTAGTTTTTTTGTTACAAGCATCCTTATACAGCATGAATGGAGTACCA 88920
Query 63093 GTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTG 63152
||||| | || | || | || || | ||| | | | || || || | ||||
Sbjct 88921 GTTTCTGTTTGTGCCTCAAGGATGGCGTACCAAAGCTTTTGGGCTTTGAT----GGTTTG 88976
Query 63153 TATCTC----CTTTCTCTTTCGTATAGAGTATACAATCGTTCGAACTCGTCTCCCCAAAC 63208
| | | | ||| |||||||| |||||| || || || ||||| | ||
Sbjct 88977 TCTTCCACGACCTTCCTTTTCGTATCTTTCGTACAATTCCTCAAATTCATCTCCATAGAC 89036
Query 63209 ATTGTCCAATCTAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCAC 63268
| | | | | |||| |||| ||| | | || | ||| || || | | | ||
Sbjct 89037 GTCGGCAAGGCCAGGAGCTTCACTTGGAGAGAACAGGGTCCAATCGCCATTCTGTTCTAC 89096
Query 63269 TCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGTTC 63328
|| |||||| || |||||||| ||||| | ||| |||| ||||| | ||| ||
Sbjct 89097 TCTTTTCATGAACAGATCAGGGATCCACAAAGCGGGGAATAAGTCTCTAGCTCTGATCTC 89156
Query 63329 CTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTC 63388
||| || || ||||| || ||| | ||| || | || || | |||||| || ||
Sbjct 89157 CTCTTTACCATGGTTCTTACGAATATCAATGAAGGCAAAGATGTCGGCATGCCATGGCTC 89216
Query 63389 CAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGT 63448
|||||| | || | | ||||| |||||||| || || || || | || | ||| ||
Sbjct 89217 CAAGTACAAAGCAAATGCACCAGGACGTTTGTTACCACCTTGGTCAACATAACGAGCAGT 89276
Query 63449 GTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGAT 63508
||| || | || |||| ||||||||||||||| || || |||| || ||||| | ||
Sbjct 89277 GTTGTTGAAGACCCTCACCATTGGAATAATACCATTCGAAGTACCGTTAGTACCAGCAAT 89336
Query 63509 ATAGCCTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGA 63568
||| ||| |||||||||||||| ||| | ||| ||||| || || |||| ||
Sbjct 89337 GTAGGATCCTGTGGCACGAATATTATGAATGTGCAAACCAATTCCACCAGCAGTTTTGGA 89396
Query 63569 GATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATGTT 63628
|||||| || ||| || || || || || |||||||| || ||||| ||||
Sbjct 89397 GATTAAAGCACATTCCTTCAAAGTATCGTAAATGCCTTCAATTGAGTCATCCCGCATGGC 89456
Query 63629 AAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGA 63688
|| || ||||| |||||||| | ||| || || || ||||| | ||||||||
Sbjct 89457 AACTAAGAAACATGATGACATTTGTGGGTGAGGGGTACCAGCGTTAAACAGAGTAGGAGA 89516
Query 63689 AGCGTGCGTAAACCATTT----TTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTA 63744
|| || || || | || ||| |||| || || || |||||| || | |
Sbjct 89517 GGCATGAGTGAAATACTTCTGACTCATAAAG----TTATAAGTTTCAATAACTCTTGCAA 89572
Query 63745 TATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAA 63804
| || |||||| || | || |||||||| | || ||| ||||| | ||| |||
Sbjct 89573 TGTCATCACCATGAATGCCGATAGCAACACGCATAATCAAGTGTTGAGGACGTTCTGCAA 89632
Query 63805 TTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGT 63864
|| || ||| ||| | ||| ||| ||||||| || || || ||||| ||||| |
Sbjct 89633 CATTACCATTAATTCTCAGAAGGTAAGATCTTTCCAAGGTCTTGAATCCAAAGTAGTTAT 89692
Query 63865 ATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGCTTATC 63907
| |||||||| ||||| | |||| | || || |||| |||
Sbjct 89693 ACTGAAAGTCTCTATCGTAGACAATAGCAGAGTTCAGCTCATC 89735
>seq28
Length=541666
Score = 170 bits (188), Expect = 2e-37
Identities = 574/882 (65%), Gaps = 14/882 (2%)
Strand=Plus/Minus
Query 33291 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33350
|||||||| ||| || | |||||||| || || ||||| || |||| || || ||
Sbjct 325623 TTTTGGTAATCAGAAACTCTCTTTTCGAAGAAGTTGGTTTTACCGGCCAAAGAAATGTTC 325564
Query 33351 TCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCCCAATTCAGAAATC 33410
|||||||| ||||| |||||| | || ||||| | ||||| |||| | |
Sbjct 325563 TCCATGAAGTCAAATGGATTGTTGACGTTGTACACCTTTTTGTTGCCCAGAGCTACCAGT 325504
Query 33411 AATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATGAGT 33470
| ||| || || ||||| || | ||| ||||| || ||||| || | |
Sbjct 325503 AGTCTGTCAGCAACGAACTCAACATACTGGCACATCAAGCTGCAGTTCATCCCCAGTAAG 325444
Query 33471 TTAACTGGAAGAGCCACAGT-AAGAAATTCTTGTTCAATGGATACCGCATTTGTTATAAT 33529
|| |||||||| | || ||| | | || ||| || || || | ||| |||||
Sbjct 325443 GAGACAGGAAGAGCGTCTGTGAAGTACCTTTT-TTCGATCTCGACAGCCTCTGTGATAAT 325385
Query 33530 AAATCTAACGGTTTCTTCACTCGGTGGATGTAATAAATGTTTAAACATCAAACATGCGAA 33589
| |||| |||| ||||| | | || |||||| ||| | ||| || || ||
Sbjct 325384 CTTTTCAACGATTTCCTCACTGGCTCTATTGTTTAAATGAGAAAATAGCAAGCAAGCAAA 325325
Query 33590 ATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCAT 33649
|| ||| | ||||||||||| | ||| | || || || || || | || |||||
Sbjct 325324 GTCAGTGTGTAATCCCTCGTCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCTGGCAT 325265
Query 33650 TAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTC 33709
|| || | ||| || | ||| || || ||||| || ||||| ||||||||||| || ||
Sbjct 325264 GAGACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAAGATCCTGAAAAGAAGATACCCTC 325205
Query 33710 TACTGCAGCAAAGGCAATAAGTCTCTCTCC--ATAA-CCGGCGCTGTCATGTATCCA-CT 33765
|| ||||| ||||||| | | || | | || | || ||| ||||| ||
Sbjct 325204 AACAGCAGCGAAGGCAACCAAACGTTCAGCGAACAATGCATCGTCATCAGAAATCCATCT 325145
Query 33766 TTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGAT 33825
|| ||||| || ||||| | ||| | ||| || || || || |||||||| || ||
Sbjct 325144 CATG-GCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTCGATGGCATTGAACAGGA 325086
Query 33826 AGtttttttCATTACTATCTTTAACATAAGTATCGATCA--AAAGACTATACATTTCCGA 33883
| | || || |||||| | |||||||| |||| || || || | || ||
Sbjct 325085 ATTCAGACTCTTTTGGATCTTTGATGTAAGTATCAATCAGCAAGGA--GTAAGTCTCGGA 325028
Query 33884 ATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCAC 33943
|||||||| || || ||||| || ||||| || ||| | || |||| || || ||
Sbjct 325027 GTGAATGTTCTCCATCATGATCTGGAAACCGTAAAAGCATTTTGCTTCGGGAAGTTGAAC 324968
Query 33944 TTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAA 34003
|| | || || ||| | || |||||||| || || || ||| ||| ||||| ||
Sbjct 324967 CTCAGCACTGAAATTTTCCACCAAGTTTTCATTGACAATACCGTCAGAGGCAGCAAAGAA 324908
Query 34004 CGCCAATACATGTTTTATAAAATATTTTTC-GTCTGGT--GTTAGTTTATTCCAATCATT 34060
|| | || || || ||||||| | | || | | |||||||| ||||
Sbjct 324907 GGCAAGGACTCTCGAGATGAAGAATTTTTCATTATCGTTCATACGATTATTCCAGTCATG 324848
Query 34061 GATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATA 34120
| ||| ||| | || | ||| || | |||||||| || || || |||| || ||
Sbjct 324847 CAAATCCTTACCCAGGTCTATTTCCTCAGCAGTCCAAAAGGAAGCTTCGGCCTGCTTGTA 324788
Query 34121 CATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAA 34162
||| | |||||| || || || | | ||||| | |||||
Sbjct 324787 CATTTGCCAGATATCGTGGTACTTCAAAGGGAAGAGCACAAA 324746
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629816182910400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |