Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016605.1_202016-02-08]
180 sequences; 9,359,306 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq15 390 2e-103
seq28 174 2e-38
>seq15
Length=271170
Score = 390 bits (432), Expect = 2e-103
Identities = 1375/2138 (64%), Gaps = 29/2138 (1%)
Strand=Plus/Plus
Query 70790 CCTTGTCCAATGTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATGC 70849
||||||| | |||||||||||||| || | || |||| ||||| || |||||||| |
Sbjct 87848 CCTTGTCAACTGTAAACTGAATGGCAGCAGCGGCAGCTTGAGTACGCAGGTAGTACATAC 87907
Query 70850 CTGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAGCTA 70908
| || |||| || |||| || ||||| |||||||| || | ||| |||| |
Sbjct 87908 CAGTCTTTAATCCTTTCTTCCAACCATAAAAGTGCATACTGGTCAATTTACCCATAGTT- 87966
Query 70909 GGATCGGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCA 70968
||| | | |||||| |||| ||||||| ||||||||| ||||| || || |||
Sbjct 87967 GGAGCCATCAGGTGAATGTTCAACGACTGAGATTGATCGATATAGGCTGATCTATCGGCA 88026
Query 70969 GCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATA 71028
||||| | || || |||||||| | ||| ||||||| ||| || |||| | ||||
Sbjct 88027 GCCATATCAATAATAGTCTTTTGAGAAATCTCCCAAACAGTCTTGTAAAGGCCTTTAAGT 88086
Query 71029 TCTTCTGGAAGGTTTGT---ATTCTGAATGGATCCACCATCTGCAATAATCCTATTTTTG 71085
| || || | ||| | ||| ||||| || || |||| ||| || ||||||
Sbjct 88087 TGCTCAGGTATGTTGGGCAAATTTTGAATAGAGCCGTTGTCTGAAATGATATGATTTTTC 88146
Query 71086 ATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACTACT 71145
|| | || | ||| | || || | | | | | | ||||||||| | |
Sbjct 88147 ATGTTATCGTCCCAAAGACCCAAATCCACTAGATCACGCAATAAGTAAGGATTAACAATT 88206
Query 71146 TGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGAC 71205
||||||||||||| ||||| | || | ||| || || || || ||||| | ||
Sbjct 88207 TGAAATTCTCCAGCTAATACACGGCGTGAGTAGATGTTGGAAGTGTAAGGTTCGAAACAC 88266
Query 71206 TCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGACTA 71265
|| || | |||| |||||| | |||||| ||||| ||||||||||| || | | || |
Sbjct 88267 TCGTTGTAACCCAGAATTTGGGAAGTTGAAGCAGTGGGCATAGGTGCAACTAGCA-ACGA 88325
Query 71266 -TTTCTAAGACCATGTG-ATCGGATTTTATCTTTTAGAGATTCCCAATTCCAAAGATCCG 71323
||||| | ||| |||| | || || |||| || |||||||| | ||| || || |
Sbjct 88326 GTTTCTTAAACC-TGTGGAAACAATCTTGGCTTTGAGTGATTCCCATTCCCACAGCTCAG 88384
Query 71324 ATGGTACAACNNNNNNNNNNNNNNNNNNNNNNATGCCGTTACTAGCGTATGATCCTGCAT 71383
| || ||||| | | || || |||
Sbjct 88385 AGGGCTTCTTGTCCCACAAGTCATATTGCAAAATGCCCTGAGATGCTGGAGAACCTTGGA 88444
Query 71384 ATGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGCTCCATAAT 71443
| || ||||| | |||||||| |||||| ||| || || || ||| ||| |
Sbjct 88445 AGGTTTCGTAGGCTCCTTCTTCGACGGCTAATTCGTTGGAGGCTTCCAAAGCTGCATGGT 88504
Query 71444 AAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAATGGATAAT 71503
| || ||||| ||||||| |||| || | || ||||| || |||||| |||
Sbjct 88505 AGATAGTTTCAAAAATCTGAATATTAAGCTGTTTGGCTTCTGGAGAATCAAAAGGAATTC 88564
Query 71504 TTAAGAGAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGTCTCT 71563
| || ||||| || || ||||| |||||||| || | | | |||||||| | | |
Sbjct 88565 TCAACTTCATAAAAGCATCAGCTAAACCTTGAACACCCACAGCTATAGGTCTATTACGCA 88624
Query 71564 TATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGAT 71623
|||| || | ||||||||||| || ||| |||| | || |||||| | || | |
Sbjct 88625 TATTCGATCTCCTAGCTTCTGGAACGGGGTAAAAATTTCTGTCGATAATTCTGTTCAAGT 88684
Query 71624 TTCTGACTATT-ACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCTCC-------- 71674
| | || || |||||| | || | || || ||| | | | |
Sbjct 88685 TAC-GAGTAACCACTTTGGTGATTTCATGCAGCTTTTCAAAGTTGTACCAGCAGTGAGTA 88743
Query 71675 -CATCTATTACAAACACG--TTCAAG-GCAACAGATGCCAGATTACAAACGGCTACCTCA 71730
|||| || ||| | | | ||| |||| ||| |||| ||||| || || |||
Sbjct 88744 TCATCGGTTTCAACAAAGGCTGGAAGAGCAATAGAAGCCAAGTTACAGACAGCAGTCTCT 88803
Query 71731 TTAGCATCGGCATATTGTATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAA 71790
| | | |||| | ||||||| |||||| ||| | || ||| || ||
Sbjct 88804 TCCGGGGAAGAGTATTCAACAATTTCACAGCAAAGGTTAGAGGATTTAATGACACCCAAG 88863
Query 71791 TTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTT 71850
|| | || ||| | ||||||||||| ||||||||||| || || || ||||||||||||
Sbjct 88864 TTCTTCTGGTTAGTTTTTTTGTTACAAGCATCCTTATACAGCATGAATGGAGTACCAGTT 88923
Query 71851 TCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAT-TCTTGTA 71909
|| | || | || | || || | ||| | | | || || || | | |||| |
Sbjct 88924 TCTGTTTGTGCCTCAAGGATGGCGTACCAAAGCTTTTGGGCTTTGATGGTTTGTCTTCCA 88983
Query 71910 TCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTC 71969
| || || |||||||| | || ||| || || || ||||| | | | | |
Sbjct 88984 CGACCTTCCT-TTTCGTATCTTTCGTACAATTCCTCAAATTCATCTCCATAGACGTCGGC 89042
Query 71970 TAATCCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTT 72029
| |||||| |||| | ||| | | || | ||| || |||| | | ||||| |||
Sbjct 89043 AAGGCCAGGAGCTTCACTTGGAGAGAACAGGGTCCAATCGCCATTCTGTTCTACTCTTTT 89102
Query 72030 CATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTT 72089
||| || |||||||| ||||| | ||| |||| ||||| | ||| |||||| ||
Sbjct 89103 CATGAACAGATCAGGGATCCACAAAGCGGGGAATAAGTCTCTAGCTCTGATCTCCTCTTT 89162
Query 72090 TCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTA 72149
|| ||||| || ||| | ||| || | || || | |||||| || ||||||||
Sbjct 89163 ACCATGGTTCTTACGAATATCAATGAAGGCAAAGATGTCGGCATGCCATGGCTCCAAGTA 89222
Query 72150 TATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATT 72209
| || | | || || |||||||| || || || || | || | ||| ||||| ||
Sbjct 89223 CAAAGCAAATGCACCAGGACGTTTGTTACCACCTTGGTCAACATAACGAGCAGTGTTGTT 89282
Query 72210 ATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCT 72269
| || |||| |||||||||||||||||| || | ||| || || || | || |||
Sbjct 89283 GAAGACCCTCACCATTGGAATAATACCATTCGAAGTACCGTTAGTACCAGCAATGTAGGA 89342
Query 72270 TCCACTGGCACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAA 72329
||| ||||||||||||| ||| | ||| ||||| || || |||| ||||||||
Sbjct 89343 TCCTGTGGCACGAATATTATGAATGTGCAAACCAATTCCACCAGCAGTTTTGGAGATTAA 89402
Query 72330 TGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAG 72389
|| ||| || || ||||| || ||||| || || |||||| |||| || ||
Sbjct 89403 AGCACATTCCTTCAAAGTATCGTAAATGCCTTCAATTGAGTCATCCCGCATGGCAACTAA 89462
Query 72390 AAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTG 72449
||||| |||||||| | || || || || ||||| | |||||||| || ||
Sbjct 89463 GAAACATGATGACATTTGTGGGTGAGGGGTACCAGCGTTAAACAGAGTAGGAGAGGCATG 89522
Query 72450 CGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTG 72509
|| || | || | | || | || || || |||||| || | | || ||
Sbjct 89523 AGTGAAATACTTCTGACTCATAAAGTTATAAGTTTCAATAACTCTTGCAATGTCATCACC 89582
Query 72510 ATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATT 72569
||| || || | || |||||||| | || || ||||| | ||| | | || |||
Sbjct 89583 ATGAATGCCGATAGCAACACGCATAATCAAGTGTTGAGGACGTTCTGCAACATTACCATT 89642
Query 72570 TATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTC 72629
||| ||| | ||| ||| ||||||| || || || ||||| ||||| || ||||||
Sbjct 89643 AATTCTCAGAAGGTAAGATCTTTCCAAGGTCTTGAATCCAAAGTAGTTATACTGAAAGTC 89702
Query 72630 TCGTTCGTAAATAATAACCGAATTGAGTTTATCCTTATATTTGTTAACTATATCCATGGT 72689
|| ||||| | |||| | || || || | ||| | ||| | || || | ||
Sbjct 89703 TCTATCGTAGACAATAGCAGAGTTCAGCTCATCAGCGTGTTTCTGGACAATGTTGTAAGT 89762
Query 72690 GATACTT--GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAA 72747
| ||| |||| | ||||| ||||| || || || || || | || | | ||
Sbjct 89763 G--TCTTCAGAAACCAGAGGAGAGTGTTTTCCGTTCTTTGGGTTGATGTATTCATACAAC 89820
Query 72748 TCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATT 72807
|| | | || | | || | || | || | ||||||| ||| || || || |||
Sbjct 89821 TCTTTGGTTACCTGAGAGTATTGCTTAGTGGTCTGTTTGTGTAAATTGGAAACAGCAATT 89880
Query 72808 CTGGCGGCTAGAATGGCATAATCTGGATGTTGTGTAGTACAAGTGGCTGCTATTTCTGCT 72867
|| || || | |||||||||||| || || || || | ||| || | || ||
Sbjct 89881 CTTGCTGCCAAAATGGCATAATCGGGGTGAATAGTGGTCATATAGGCAGCAGTCTCAGCA 89940
Query 72868 GCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATA 72905
|| || |||||| || || || ||||| || | |||
Sbjct 89941 GCAAGGTTGTCCAGCTCCACGGTAGTTACACCGTGATA 89978
>seq28
Length=541666
Score = 174 bits (192), Expect = 2e-38
Identities = 576/883 (65%), Gaps = 16/883 (2%)
Strand=Plus/Minus
Query 41774 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTT 41833
|||||||| ||| || | |||||||| || || || || || |||| || || ||
Sbjct 325623 TTTTGGTAATCAGAAACTCTCTTTTCGAAGAAGTTGGTTTTACCGGCCAAAGAAATGTTC 325564
Query 41834 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 41893
|||||||| ||||| |||||| | || || || | ||||| |||| | |
Sbjct 325563 TCCATGAAGTCAAATGGATTGTTGACGTTGTACACCTTTTTGTTGCCCAGAGCTACCAGT 325504
Query 41894 AATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTA-TAAG 41952
| ||| || || | ||| || | ||| ||||| || ||||| || | ||||
Sbjct 325503 AGTCTGTCAGCAACGAACTCAACATACTGGCACATCAAGCTGCAGTTCATCCCCAGTAAG 325444
Query 41953 TTTAACTGGAAGAGCCACAGT-AAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAA 42011
| | |||||||| | || ||| | | || ||| || ||| || ||||| ||||
Sbjct 325443 GAGA-CAGGAAGAGCGTCTGTGAAGTACCTTTT-TTCGATCTCGACAGCCTCTGTGATAA 325386
Query 42012 TAGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGA 42071
| | || |||| ||||| | | || |||||| ||| | ||| || || |
Sbjct 325385 TCTTTTCAACGATTTCCTCACTGGCTCTATTGTTTAAATGAGAAAATAGCAAGCAAGCAA 325326
Query 42072 AATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCA 42131
| || ||| | ||||| ||||| | ||| | || ||||| || || | || ||||
Sbjct 325325 AGTCAGTGTGTAATCCCTCGTCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCTGGCA 325266
Query 42132 TTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTT 42191
| || || | ||| || | ||| || ||||| ||||| ||||| ||||||||||| || |
Sbjct 325265 TGAGACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAAGATCCTGAAAAGAAGATACCCT 325206
Query 42192 CTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTGTCAT---GTATCCA-C 42247
| || || || ||||||| | | || | | ||| ||||| ||||| |
Sbjct 325205 CAACAGCAGCGAAGGCAACCAAACGTTCAGCGAACAATGCATCGTCATCAGAAATCCATC 325146
Query 42248 TTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGA 42307
| || ||||| || ||||| | ||| | ||| || || || || |||||||| || ||
Sbjct 325145 TCATG-GCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTCGATGGCATTGAACAGG 325087
Query 42308 TAGtttttttCATTACTATCTTTAACATATGTATCGATCA--AAAGACTATACATTTCTG 42365
| | || || |||||| | || ||||| |||| || || || | || |
Sbjct 325086 AATTCAGACTCTTTTGGATCTTTGATGTAAGTATCAATCAGCAAGGA--GTAAGTCTCGG 325029
Query 42366 AATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTA 42425
| |||||||| || || ||||| || ||||| || ||| | || |||| || || |
Sbjct 325028 AGTGAATGTTCTCCATCATGATCTGGAAACCGTAAAAGCATTTTGCTTCGGGAAGTTGAA 324969
Query 42426 CTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAAA 42485
| || | || || ||| | || ||||| || || || |||||| ||| ||||| |
Sbjct 324968 CCTCAGCACTGAAATTTTCCACCAAGTTTTCATTGACAATACCGTCAGAGGCAGCAAAGA 324909
Query 42486 ACGCCAATACATGTTTTATAAAATATTTTTCGT--CCGGTGTTA-ATTTATTCCAATCAT 42542
| || | || || || ||||||| | || | || |||||||| ||||
Sbjct 324908 AGGCAAGGACTCTCGAGATGAAGAATTTTTCATTATCGTTCATACGATTATTCCAGTCAT 324849
Query 42543 TGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTTAT 42602
| ||| ||| | |||| ||| || | |||||||| || ||||| |||| || |
Sbjct 324848 GCAAATCCTTACCCAGGTCTATTTCCTCAGCAGTCCAAAAGGAAGCTTCGGCCTGCTTGT 324789
Query 42603 ACATATTCCAGATATCATGATATTGAATTGGGAAAATAACAAA 42645
|||| | ||||||||| || || | | ||||| | |||||
Sbjct 324788 ACATTTGCCAGATATCGTGGTACTTCAAAGGGAAGAGCACAAA 324746
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671137689936800
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