Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016605.1_202016-02-08] 180 sequences; 9,359,306 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq15 390 2e-103 seq28 174 2e-38 >seq15 Length=271170 Score = 390 bits (432), Expect = 2e-103 Identities = 1375/2138 (64%), Gaps = 29/2138 (1%) Strand=Plus/Plus Query 70790 CCTTGTCCAATGTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATGC 70849 ||||||| | |||||||||||||| || | || |||| ||||| || |||||||| | Sbjct 87848 CCTTGTCAACTGTAAACTGAATGGCAGCAGCGGCAGCTTGAGTACGCAGGTAGTACATAC 87907 Query 70850 CTGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAGCTA 70908 | || |||| || |||| || ||||| |||||||| || | ||| |||| | Sbjct 87908 CAGTCTTTAATCCTTTCTTCCAACCATAAAAGTGCATACTGGTCAATTTACCCATAGTT- 87966 Query 70909 GGATCGGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCA 70968 ||| | | |||||| |||| ||||||| ||||||||| ||||| || || ||| Sbjct 87967 GGAGCCATCAGGTGAATGTTCAACGACTGAGATTGATCGATATAGGCTGATCTATCGGCA 88026 Query 70969 GCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATA 71028 ||||| | || || |||||||| | ||| ||||||| ||| || |||| | |||| Sbjct 88027 GCCATATCAATAATAGTCTTTTGAGAAATCTCCCAAACAGTCTTGTAAAGGCCTTTAAGT 88086 Query 71029 TCTTCTGGAAGGTTTGT---ATTCTGAATGGATCCACCATCTGCAATAATCCTATTTTTG 71085 | || || | ||| | ||| ||||| || || |||| ||| || |||||| Sbjct 88087 TGCTCAGGTATGTTGGGCAAATTTTGAATAGAGCCGTTGTCTGAAATGATATGATTTTTC 88146 Query 71086 ATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACTACT 71145 || | || | ||| | || || | | | | | | ||||||||| | | Sbjct 88147 ATGTTATCGTCCCAAAGACCCAAATCCACTAGATCACGCAATAAGTAAGGATTAACAATT 88206 Query 71146 TGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGAC 71205 ||||||||||||| ||||| | || | ||| || || || || ||||| | || Sbjct 88207 TGAAATTCTCCAGCTAATACACGGCGTGAGTAGATGTTGGAAGTGTAAGGTTCGAAACAC 88266 Query 71206 TCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGACTA 71265 || || | |||| |||||| | |||||| ||||| ||||||||||| || | | || | Sbjct 88267 TCGTTGTAACCCAGAATTTGGGAAGTTGAAGCAGTGGGCATAGGTGCAACTAGCA-ACGA 88325 Query 71266 -TTTCTAAGACCATGTG-ATCGGATTTTATCTTTTAGAGATTCCCAATTCCAAAGATCCG 71323 ||||| | ||| |||| | || || |||| || |||||||| | ||| || || | Sbjct 88326 GTTTCTTAAACC-TGTGGAAACAATCTTGGCTTTGAGTGATTCCCATTCCCACAGCTCAG 88384 Query 71324 ATGGTACAACNNNNNNNNNNNNNNNNNNNNNNATGCCGTTACTAGCGTATGATCCTGCAT 71383 | || ||||| | | || || ||| Sbjct 88385 AGGGCTTCTTGTCCCACAAGTCATATTGCAAAATGCCCTGAGATGCTGGAGAACCTTGGA 88444 Query 71384 ATGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGCTCCATAAT 71443 | || ||||| | |||||||| |||||| ||| || || || ||| ||| | Sbjct 88445 AGGTTTCGTAGGCTCCTTCTTCGACGGCTAATTCGTTGGAGGCTTCCAAAGCTGCATGGT 88504 Query 71444 AAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAATGGATAAT 71503 | || ||||| ||||||| |||| || | || ||||| || |||||| ||| Sbjct 88505 AGATAGTTTCAAAAATCTGAATATTAAGCTGTTTGGCTTCTGGAGAATCAAAAGGAATTC 88564 Query 71504 TTAAGAGAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGTCTCT 71563 | || ||||| || || ||||| |||||||| || | | | |||||||| | | | Sbjct 88565 TCAACTTCATAAAAGCATCAGCTAAACCTTGAACACCCACAGCTATAGGTCTATTACGCA 88624 Query 71564 TATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGAT 71623 |||| || | ||||||||||| || ||| |||| | || |||||| | || | | Sbjct 88625 TATTCGATCTCCTAGCTTCTGGAACGGGGTAAAAATTTCTGTCGATAATTCTGTTCAAGT 88684 Query 71624 TTCTGACTATT-ACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCTCC-------- 71674 | | || || |||||| | || | || || ||| | | | | Sbjct 88685 TAC-GAGTAACCACTTTGGTGATTTCATGCAGCTTTTCAAAGTTGTACCAGCAGTGAGTA 88743 Query 71675 -CATCTATTACAAACACG--TTCAAG-GCAACAGATGCCAGATTACAAACGGCTACCTCA 71730 |||| || ||| | | | ||| |||| ||| |||| ||||| || || ||| Sbjct 88744 TCATCGGTTTCAACAAAGGCTGGAAGAGCAATAGAAGCCAAGTTACAGACAGCAGTCTCT 88803 Query 71731 TTAGCATCGGCATATTGTATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAA 71790 | | | |||| | ||||||| |||||| ||| | || ||| || || Sbjct 88804 TCCGGGGAAGAGTATTCAACAATTTCACAGCAAAGGTTAGAGGATTTAATGACACCCAAG 88863 Query 71791 TTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTT 71850 || | || ||| | ||||||||||| ||||||||||| || || || |||||||||||| Sbjct 88864 TTCTTCTGGTTAGTTTTTTTGTTACAAGCATCCTTATACAGCATGAATGGAGTACCAGTT 88923 Query 71851 TCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAT-TCTTGTA 71909 || | || | || | || || | ||| | | | || || || | | |||| | Sbjct 88924 TCTGTTTGTGCCTCAAGGATGGCGTACCAAAGCTTTTGGGCTTTGATGGTTTGTCTTCCA 88983 Query 71910 TCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTC 71969 | || || |||||||| | || ||| || || || ||||| | | | | | Sbjct 88984 CGACCTTCCT-TTTCGTATCTTTCGTACAATTCCTCAAATTCATCTCCATAGACGTCGGC 89042 Query 71970 TAATCCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTT 72029 | |||||| |||| | ||| | | || | ||| || |||| | | ||||| ||| Sbjct 89043 AAGGCCAGGAGCTTCACTTGGAGAGAACAGGGTCCAATCGCCATTCTGTTCTACTCTTTT 89102 Query 72030 CATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTT 72089 ||| || |||||||| ||||| | ||| |||| ||||| | ||| |||||| || Sbjct 89103 CATGAACAGATCAGGGATCCACAAAGCGGGGAATAAGTCTCTAGCTCTGATCTCCTCTTT 89162 Query 72090 TCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTA 72149 || ||||| || ||| | ||| || | || || | |||||| || |||||||| Sbjct 89163 ACCATGGTTCTTACGAATATCAATGAAGGCAAAGATGTCGGCATGCCATGGCTCCAAGTA 89222 Query 72150 TATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATT 72209 | || | | || || |||||||| || || || || | || | ||| ||||| || Sbjct 89223 CAAAGCAAATGCACCAGGACGTTTGTTACCACCTTGGTCAACATAACGAGCAGTGTTGTT 89282 Query 72210 ATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCT 72269 | || |||| |||||||||||||||||| || | ||| || || || | || ||| Sbjct 89283 GAAGACCCTCACCATTGGAATAATACCATTCGAAGTACCGTTAGTACCAGCAATGTAGGA 89342 Query 72270 TCCACTGGCACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAA 72329 ||| ||||||||||||| ||| | ||| ||||| || || |||| |||||||| Sbjct 89343 TCCTGTGGCACGAATATTATGAATGTGCAAACCAATTCCACCAGCAGTTTTGGAGATTAA 89402 Query 72330 TGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAG 72389 || ||| || || ||||| || ||||| || || |||||| |||| || || Sbjct 89403 AGCACATTCCTTCAAAGTATCGTAAATGCCTTCAATTGAGTCATCCCGCATGGCAACTAA 89462 Query 72390 AAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTG 72449 ||||| |||||||| | || || || || ||||| | |||||||| || || Sbjct 89463 GAAACATGATGACATTTGTGGGTGAGGGGTACCAGCGTTAAACAGAGTAGGAGAGGCATG 89522 Query 72450 CGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTG 72509 || || | || | | || | || || || |||||| || | | || || Sbjct 89523 AGTGAAATACTTCTGACTCATAAAGTTATAAGTTTCAATAACTCTTGCAATGTCATCACC 89582 Query 72510 ATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATT 72569 ||| || || | || |||||||| | || || ||||| | ||| | | || ||| Sbjct 89583 ATGAATGCCGATAGCAACACGCATAATCAAGTGTTGAGGACGTTCTGCAACATTACCATT 89642 Query 72570 TATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTC 72629 ||| ||| | ||| ||| ||||||| || || || ||||| ||||| || |||||| Sbjct 89643 AATTCTCAGAAGGTAAGATCTTTCCAAGGTCTTGAATCCAAAGTAGTTATACTGAAAGTC 89702 Query 72630 TCGTTCGTAAATAATAACCGAATTGAGTTTATCCTTATATTTGTTAACTATATCCATGGT 72689 || ||||| | |||| | || || || | ||| | ||| | || || | || Sbjct 89703 TCTATCGTAGACAATAGCAGAGTTCAGCTCATCAGCGTGTTTCTGGACAATGTTGTAAGT 89762 Query 72690 GATACTT--GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAA 72747 | ||| |||| | ||||| ||||| || || || || || | || | | || Sbjct 89763 G--TCTTCAGAAACCAGAGGAGAGTGTTTTCCGTTCTTTGGGTTGATGTATTCATACAAC 89820 Query 72748 TCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATT 72807 || | | || | | || | || | || | ||||||| ||| || || || ||| Sbjct 89821 TCTTTGGTTACCTGAGAGTATTGCTTAGTGGTCTGTTTGTGTAAATTGGAAACAGCAATT 89880 Query 72808 CTGGCGGCTAGAATGGCATAATCTGGATGTTGTGTAGTACAAGTGGCTGCTATTTCTGCT 72867 || || || | |||||||||||| || || || || | ||| || | || || Sbjct 89881 CTTGCTGCCAAAATGGCATAATCGGGGTGAATAGTGGTCATATAGGCAGCAGTCTCAGCA 89940 Query 72868 GCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATA 72905 || || |||||| || || || ||||| || | ||| Sbjct 89941 GCAAGGTTGTCCAGCTCCACGGTAGTTACACCGTGATA 89978 >seq28 Length=541666 Score = 174 bits (192), Expect = 2e-38 Identities = 576/883 (65%), Gaps = 16/883 (2%) Strand=Plus/Minus Query 41774 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTT 41833 |||||||| ||| || | |||||||| || || || || || |||| || || || Sbjct 325623 TTTTGGTAATCAGAAACTCTCTTTTCGAAGAAGTTGGTTTTACCGGCCAAAGAAATGTTC 325564 Query 41834 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 41893 |||||||| ||||| |||||| | || || || | ||||| |||| | | Sbjct 325563 TCCATGAAGTCAAATGGATTGTTGACGTTGTACACCTTTTTGTTGCCCAGAGCTACCAGT 325504 Query 41894 AATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTA-TAAG 41952 | ||| || || | ||| || | ||| ||||| || ||||| || | |||| Sbjct 325503 AGTCTGTCAGCAACGAACTCAACATACTGGCACATCAAGCTGCAGTTCATCCCCAGTAAG 325444 Query 41953 TTTAACTGGAAGAGCCACAGT-AAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAA 42011 | | |||||||| | || ||| | | || ||| || ||| || ||||| |||| Sbjct 325443 GAGA-CAGGAAGAGCGTCTGTGAAGTACCTTTT-TTCGATCTCGACAGCCTCTGTGATAA 325386 Query 42012 TAGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGA 42071 | | || |||| ||||| | | || |||||| ||| | ||| || || | Sbjct 325385 TCTTTTCAACGATTTCCTCACTGGCTCTATTGTTTAAATGAGAAAATAGCAAGCAAGCAA 325326 Query 42072 AATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCA 42131 | || ||| | ||||| ||||| | ||| | || ||||| || || | || |||| Sbjct 325325 AGTCAGTGTGTAATCCCTCGTCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCTGGCA 325266 Query 42132 TTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTT 42191 | || || | ||| || | ||| || ||||| ||||| ||||| ||||||||||| || | Sbjct 325265 TGAGACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAAGATCCTGAAAAGAAGATACCCT 325206 Query 42192 CTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTGTCAT---GTATCCA-C 42247 | || || || ||||||| | | || | | ||| ||||| ||||| | Sbjct 325205 CAACAGCAGCGAAGGCAACCAAACGTTCAGCGAACAATGCATCGTCATCAGAAATCCATC 325146 Query 42248 TTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGA 42307 | || ||||| || ||||| | ||| | ||| || || || || |||||||| || || Sbjct 325145 TCATG-GCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTCGATGGCATTGAACAGG 325087 Query 42308 TAGtttttttCATTACTATCTTTAACATATGTATCGATCA--AAAGACTATACATTTCTG 42365 | | || || |||||| | || ||||| |||| || || || | || | Sbjct 325086 AATTCAGACTCTTTTGGATCTTTGATGTAAGTATCAATCAGCAAGGA--GTAAGTCTCGG 325029 Query 42366 AATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTA 42425 | |||||||| || || ||||| || ||||| || ||| | || |||| || || | Sbjct 325028 AGTGAATGTTCTCCATCATGATCTGGAAACCGTAAAAGCATTTTGCTTCGGGAAGTTGAA 324969 Query 42426 CTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAAA 42485 | || | || || ||| | || ||||| || || || |||||| ||| ||||| | Sbjct 324968 CCTCAGCACTGAAATTTTCCACCAAGTTTTCATTGACAATACCGTCAGAGGCAGCAAAGA 324909 Query 42486 ACGCCAATACATGTTTTATAAAATATTTTTCGT--CCGGTGTTA-ATTTATTCCAATCAT 42542 | || | || || || ||||||| | || | || |||||||| |||| Sbjct 324908 AGGCAAGGACTCTCGAGATGAAGAATTTTTCATTATCGTTCATACGATTATTCCAGTCAT 324849 Query 42543 TGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTTAT 42602 | ||| ||| | |||| ||| || | |||||||| || ||||| |||| || | Sbjct 324848 GCAAATCCTTACCCAGGTCTATTTCCTCAGCAGTCCAAAAGGAAGCTTCGGCCTGCTTGT 324789 Query 42603 ACATATTCCAGATATCATGATATTGAATTGGGAAAATAACAAA 42645 |||| | ||||||||| || || | | ||||| | ||||| Sbjct 324788 ACATTTGCCAGATATCGTGGTACTTCAAAGGGAAGAGCACAAA 324746 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671137689936800