Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016605.1_202016-02-08]
180 sequences; 9,359,306 total letters
Query= NC_006966.1
Length=166259
Score E
Sequences producing significant alignments: (Bits) Value
seq28 154 2e-32
>seq28
Length=541666
Score = 154 bits (170), Expect = 2e-32
Identities = 590/919 (64%), Gaps = 25/919 (3%)
Strand=Plus/Minus
Query 21185 TTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATAGAT 21244
||||| |||||| |||||| |||||||| || || || || || |||| || ||
Sbjct 325623 TTTTGGTAATCAGAAACTCTCTTTTCGAAGAAGTTGGTTTTACCGGCCAAAGAAATGTTC 325564
Query 21245 TCCATAAAATCAAATGGATT-TTCAGATT-TAAATATTTTATTACAACCCAGTTCTGATA 21302
||||| || ||||||||||| || | || || | |||| | ||||| || |
Sbjct 325563 TCCATGAAGTCAAATGGATTGTTGACGTTGTACACCTTTTTGTTG--CCCAGAGCTACCA 325506
Query 21303 ATAATCTATCTGCTACAAATTCTATATATTGACACATTAATTCACAATTCATACCGATCA 21362
|| ||| || || || || || | ||| || ||||| || || ||||| || | |
Sbjct 325505 GTAGTCTGTCAGCAACGAACTCAACATACTGGCACATCAAGCTGCAGTTCATCCCCAGTA 325446
Query 21363 ATTTTACAGGAAGAGCTTTTGTCAAAAAAGATTTTTCTATAGAGACGGCTTCAACAATTA 21422
| ||||||||||| | ||| || | |||||| || ||| || || || |
Sbjct 325445 AGGAGACAGGAAGAGCGTCTGTGAAGTACCTTTTTTCGATCTCGACAGCCTCTGTGATAA 325386
Query 21423 TATTTATTATCCTAGATGTACTAGGGGGATACAAT----AATTGTTTAAACATCAAACAT 21478
| ||| || ||| | || || | | | || || ||| | ||| ||
Sbjct 325385 TCTTT----TCAACGATTTCCTCACTGGCTCTATTGTTTAAATGAGAAAATAGCAAGCAA 325330
Query 21479 GCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCG 21538
||||| ||| || || || || || || | || | ||||| || || || |||||
Sbjct 325329 GCAAAGTCAGTGTGTAATCCCTCGTCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCT 325270
Query 21539 GGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAATG 21598
||||| | |||||||| || ||||| || || || ||||| | |||||||||||| ||
Sbjct 325269 GGCATGAGACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAAGATCCTGAAAAGAAGATA 325210
Query 21599 CCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATTCTTTATCCAATATC 21658
|||||||| ||||| || ||||| || |||||| || | | || | ||| | |||
Sbjct 325209 CCCTCAACAGCAGCGAAGGCAACCAAACGTTCAGCGAACAATGCATCGTCATCAGAAATC 325150
Query 21659 CATTTTTCTGCCCATTTTGCCTTTTCTTTAATACAATCAATTGTATCAATAGCTTTTAAA 21718
||| | ||||| | ||||||||||| ||||| ||| || || || || || ||
Sbjct 325149 CATCTCATGGCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTCGATGGCATTGAAC 325090
Query 21719 AGATGAttt--ttttCATCTACATCGGTTATGNNNNNNNNNNNNNNNNNACTATACATTT 21776
|| || || || | | ||| | ||| || | |
Sbjct 325089 AG--GAATTCAGACTCTTTTGGATCTTTGATGTAAGTATCAATCAGCAAGGAGTAAGTCT 325032
Query 21777 CAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGCCTCTGAACATT 21836
| || || || || || ||| ||||| || |||||||| ||| |||| || | | ||
Sbjct 325031 CGGAGTGAATGTTCTCCATCATGATCTGGAAACCGTAAAAGCATTTTGCTTCGGGAAGTT 324972
Query 21837 GAACCTC-GGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCATCACTGGCGGCA 21895
||||||| | | | |||| || ||||||||||||| || || || ||| ||| |||
Sbjct 324971 GAACCTCAGCACTGAAAT-TTTCCACCAAGTTTTCATTGACAATACCGTCAGAGGCAGCA 324913
Query 21896 AAAAATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAAT----TTTTTCCA 21951
|| || || | | | || || || ||| ||||| ||| || || |||||
Sbjct 324912 AAGAAGGCAAGGACTCTCGAGATGAAGAATTTTTCATTATC-GTTCATACGATTATTCCA 324854
Query 21952 ATCTAATAAATCTTTTGATAAATCTACTTCTTCAGTTGTCCAAAAGCTAGCAATAGCCTT 22011
|| ||||| || | |||| ||| |||| ||||||||| ||| ||||
Sbjct 324853 GTCATGCAAATCCTTACCCAGGTCTATTTCCTCAGCAGTCCAAAAGGAAGCTTCGGCCTG 324794
Query 22012 TTTATACATAATCCAGATATCATTATATATTATTGGAAATATTACAAACCTGTTATTTGA 22071
|| ||||| ||||||||| | || | | || || | ||||| | | |||
Sbjct 324793 CTTGTACATTTGCCAGATATCGTGGTACTTCAAAGGGAAGAGCACAAAAC-GACGTTTAT 324735
Query 22072 T-TCAACTAAAAGTGGTTC 22089
| |||||||| ||||||||
Sbjct 324734 TCTCAACTAAGAGTGGTTC 324716
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 531899603223200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |