Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016605.1_202016-02-08] 180 sequences; 9,359,306 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq15 167 6e-36 >seq15 Length=271170 Score = 167 bits (184), Expect = 6e-36 Identities = 771/1203 (64%), Gaps = 34/1203 (3%) Strand=Plus/Minus Query 363380 AGTATGA-TATTTTCGGATATAAGACGATGGAGAAATCCTACCTATCTC-GTATCAATGG 363437 ||||| | || ||| |||| ||||| |||| | ||| ||||| ||| | || ||||| Sbjct 89695 AGTATAACTACTTT-GGATTCAAGACCTTGGAAAGATCTTACCT-TCTGAGAATTAATGG 89638 Query 363438 TGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCC 363497 | || ||| ||||| || || || || | |||||||||||||| || || ||| | Sbjct 89637 TAATGTTGCAGAACGTCCTCAACACTTGATTATGCGTGTTGCTATCGGCATTCATGGTGA 89578 Query 363498 GGATGTTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTA-TTCACGCACG 363556 || ||| | |||||||| ||||| || | ||| | ||| ||||| || | Sbjct 89577 TGACATTGCAAGAGTTATTGAAACTTATAACTTTATGAGT-CAGAAGTATTTCACTCATG 89519 Query 363557 CCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTT- 363615 || | || || ||| || ||||| || | | | ||||| ||||| || || |||||| Sbjct 89518 CCTCTCCTACTCTGTTTAACGCTGGTACCCCTCACCCACAAATGTCATCATG-TTTCTTA 89460 Query 363616 CTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTT 363675 | ||| ||| || || || || || || | || || | ||| | |||||| | Sbjct 89459 GTTGCCATGCGGGATGACTCAATTGAAGGCATTTACGATACTTTGAAGGAATGTGCTTTA 89400 Query 363676 ATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTG-CACAGAACAG 363734 || ||||| | ||| || ||||||||| | || || ||| |||||| ||||| | Sbjct 89399 ATCTCCAAAACTGCTGGTGGAATTGGTTTGCACATTCATAATATTCGTGCCACAGGA-TC 89341 Query 363735 TTACATTCGCGGCACAGGGGGATAC-TCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTG 363793 |||||| || || || ||| |||||||| | |||| ||| | | || || Sbjct 89340 CTACATTGCTGGTACTAACGG-TACTTCGAATGGTATTATTCCAATGGTGAGGGTCTTCA 89282 Query 363794 ACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGT 363853 |||| ||||| | || || ||||| ||||| || || || || |||||| ||| Sbjct 89281 ACAACACTGCTCGTTATGTTGACCAAGGTGGTAACAAACGTCCTGGTGCATTTGCTTTGT 89222 Query 363854 ATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAA 363913 | | ||||| |||||||| || |||| || |||| | || || ||| || | Sbjct 89221 ACTTGGAGCCATGGCATGCCGACATCTTTGCCTTCATTGATATTCGTAAGAACCATGGTA 89162 Query 363914 AAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGA 363973 ||||||| | | || | || | ||| || | ||| | |||| | || |||| Sbjct 89161 AAGAGGAGATCAGAGCTAGAGACTTATTCCCCGCTTTGTGGATCCCTGATCTGTTCATGA 89102 Query 363974 AGCGCGTGGAGGCAG-GTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTT 364032 | | || || ||| | ||||| | || || | ||| ||| ||| || ||| Sbjct 89101 AAAGAGTAGA-ACAGAATGGCGATTGGACCCTGTTCTCTCCAAGTGAAGCTCCTGGCCTT 89043 Query 364033 TCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAG 364092 |||| || | || || || | || | | ||||||| || ||| | |||| | Sbjct 89042 GCCGACGTCTATGGAGATGAATTTGAGGAATTGTACGAAAGATACGAA----AAGGAAGG 88987 Query 364093 GCTCGTAAGACA----ATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGAT 364148 | | |||||| || || || ||||| |||| |||||| | || | || | Sbjct 88986 TCGTGGAAGACAAACCATCAAAGCCCAAAAGCTTTGGTACGCCATCCTTGAGGCACAAAC 88927 Query 364149 TGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCA 364208 || || || || || | ||| |||| || ||| | || ||| || | |||||| | Sbjct 88926 AGAAACTGGTACTCCATTCATGCTGTATAAGGATGCTTGTAACAAAAAAACTAACCAGAA 88867 Query 364209 GCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCC 364268 | || | ||| ||| | ||||| || || ||| |||||||| | | || Sbjct 88866 GAACTTGGGTGTCATTAAATCCTCTAACCTTTGCTGTGAAATTGTTGAATACTCTTCCCC 88807 Query 364269 CGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT---AAAAGA 364325 || |||||||| || |||||| | || || || || ||||| || ||||| || || Sbjct 88806 GGAAGAGACTGCTGTCTGTAACTTGGCTTCTATTGCTCTTCCAGCCTTTGTTGAAACCGA 88747 Query 364326 TGGTACT------TTTGACCAC---CAGCATCTTTATGACGTAACCTATCATGCTACTTG 364376 || |||| | || || | | || |||| | ||| | | |||| | Sbjct 88746 TGATACTCACTGCTGGTACAACTTTGAAAAGCTGCATGAAATCACCAAAGTGGTTACTCG 88687 Query 364377 CAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAA 364436 || | ||| ||||||||| |||| ||| || |||| ||||| | | || || Sbjct 88686 TAACTTGAACAGAATTATCGACAGAAATTTTTACCCCGTTCCAGAAGCTAGGAGATCGAA 88627 Query 364437 TATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCT 364496 ||||||| || | || || | | | ||||| || || | ||||| | |||||||| | | Sbjct 88626 TATGCGTAATAGACCTATAGCTGTGGGTGTTCAAGGTTTAGCTGATGCTTTTATGAAGTT 88567 Query 364497 CAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAAT 364556 | || | |||||||| || || || || |||| |||| |||||||| || Sbjct 88566 GAGAATTCCTTTTGATTCTCCAGAAGCCAAACAGCTTAATATTCAGATTTTTGAAACTAT 88507 Query 364557 GTA 364559 || Sbjct 88506 CTA 88504 Score = 84.2 bits (92), Expect = 6e-11 Identities = 224/337 (66%), Gaps = 8/337 (2%) Strand=Plus/Minus Query 364753 CCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTT 364812 || |||||||| ||||| ||| | || || || || |||||||||| |||||||| | Sbjct 88310 CCTATGCCCACTGCTTCAACTTCCCAAATTCTGGGTTACAACGAGTGTTTCGAACCTTAC 88251 Query 364813 ACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTAC 364872 || ||| | || |||||||| || | | |||||||||| | |||||| ||| Sbjct 88250 ACTTCCAACATCTACTCACGCCGTGTATTAGCTGGAGAATTTCAAATTGTTAATCCTTAC 88191 Query 364873 CTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCATC 364932 || | ||||| || || || |||| || | |||||| || ||||||| Sbjct 88190 TTATTGCGTGATCTAGTGGATTTGGGTCTTTGGGACGATAACATGAAAAATCATATCATT 88131 Query 364933 GCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAA--GCCTATTT 364990 | | || || ||| | || || | || | || || | || || |||| || Sbjct 88130 TCAGACAACGGCTCTATTCAAAATTTGCCCAACATACCTGAGCAACTTAAAGGCCT--TT 88073 Query 364991 ACAAAACCGTATGGGAAATTTC-CATGCGAACTCTCATTGATATGGCGGCCGATCGCGGT 365049 |||| || || ||||| ||||| || || || | ||||||||||| |||||| | Sbjct 88072 ACAAGACTGTTTGGGAGATTTCTCAAAAGA-CTATTATTGATATGGCTGCCGATAGATCA 88014 Query 365050 GCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCA 365086 || | |||| ||| |||||||| ||| ||||| Sbjct 88013 GCCTATATCGATCAATCTCAGTCGTTGAAC--ATTCA 87979 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303350594140760