Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016605.1_202016-02-08] 180 sequences; 9,359,306 total letters Query= NC_009334.1 Length=172764 Score E Sequences producing significant alignments: (Bits) Value seq88 280 2e-70 seq87 219 5e-52 >seq88 Length=671 Score = 280 bits (310), Expect = 2e-70 Identities = 163/168 (97%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 96108 GATCCTCACAGGCCGCACCCAGCTCTTCTTCCGTTGCCCCAGTAGCATCTCTGTCTGGTG 96167 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 168 GATCCTCACAGGCCGCACCCAGCTTTTCTTCCGTTGCCCCAGTAGCATCTCTGTCTGGTG 109 Query 96168 ACCTTGAAGAGGAAGAGGAGGGGTCCCGAGAATCCCCATCCCTACCGTCCAGCAAAAAGG 96227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 108 ACCTTGAAGAGGAAGAGGAGGGGTCCCGAGAATCCCCATCCCTACCGTCCAGCAAAAAGG 49 Query 96228 GGGCCGATGAATTTGAGGCCTGGCTTGAGGCTCAGGATGCAAATTTTG 96275 ||| ||| ||||||||||||||||||||||||||||| |||||| ||| Sbjct 48 GGGACGAGGAATTTGAGGCCTGGCTTGAGGCTCAGGACGCAAATCTTG 1 >seq87 Length=772 Score = 219 bits (242), Expect = 5e-52 Identities = 127/131 (97%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 98592 CACTCAGCTCCGCGCTCAACACCTTCTCGCGTTGGAAAACATTAGCGACATTTACCTGGT 98651 |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| Sbjct 772 CACTCAGCTCCGCGCTCAACGCCTTCTCGCTTTGGAAAACATTAGCGACATTTACCTGGT 713 Query 98652 GAGCAATCAGACATGCGACGGCTTTAGCCTGGCCTCCTTAAATTCACCTAAGAATGGGAG 98711 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 712 GCGCAATCAGACATGCGACGGCTTTAGCCTGGCCTCCTTAAATTCACCTAAGAATGGGAG 653 Query 98712 CAACCAGCTGG 98722 |||||||| || Sbjct 652 CAACCAGCAGG 642 Score = 199 bits (220), Expect = 4e-46 Identities = 113/115 (98%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 7342 GCAGGAAAAGGACAAGCAGCGAAAATTCACGCCCCCTTGGGAGGTGGCGGCATATGCAAA 7401 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 646 GCAGGAAAAGGACAAGCAGCGAAAATTCACGCCCCCTTGGGAGGTGGCGGCATATGCAAA 587 Query 7402 GGATAGCACTCCCACTCTACTACTGGGTATTATATGCTGACTGTATATGCATTAG 7456 |||||||||||||||||||||||||||||| ||||||||||||||||||||| || Sbjct 586 GGATAGCACTCCCACTCTACTACTGGGTATCATATGCTGACTGTATATGCATGAG 532 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 552715556387200