Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016605.1_202016-02-08] 180 sequences; 9,359,306 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq15 214 2e-50 seq28 113 6e-20 >seq15 Length=271170 Score = 214 bits (236), Expect = 2e-50 Identities = 682/1042 (65%), Gaps = 23/1042 (2%) Strand=Plus/Minus Query 111619 ACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTTTTGGAGA 111678 || || | ||||| || || ||||| || ||||| || || |||| ||| | || | Sbjct 89614 ACTTGATTATGCGTGTTGCTATCGGCATTCATGGTGATGACATTGCAAGAGTTATTGAAA 89555 Query 111679 CATACGACAAGATGTCCC-GTGGTATGTTCATCCACGCAACACCAACCCTCTTCAACGCT 111737 | || || ||| | | |||| |||| || || | || || || || |||||| Sbjct 89554 CTTATAACTTTATGAGTCAGAAGTAT-TTCACTCATGCCTCTCCTACTCTGTTTAACGCT 89496 Query 111738 GGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGATTCAATC 111797 ||||| || || |||||||| |||||| | |||| | ||| || ||||| Sbjct 89495 GGTACCCCTCACCCACAAATGTCATCATGTTTCTTAGTTGCCATGCGGGATGACTCAATT 89436 Query 111798 AATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGTGGTATC 111857 | |||||||||| ||| | | |||||||| |||||| || |||||||| || Sbjct 89435 GAAGGCATTTACGATACTTTGAAGGAATGTGCTTTAATCTCCAAAACTGCTGGTGGAATT 89376 Query 111858 GGGATGCACATCCATGATGTCAGAGCCAACAAG-TCTCGTATTAGAGGTACAAATGGTCA 111916 || ||||||| ||| || | | ||| ||| | || ||| ||||| || ||| Sbjct 89375 GGTTTGCACATTCATAATATTCGTGCC-ACAGGATCCTACATTGCTGGTACTAACGGTAC 89317 Query 111917 ATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAACCA 111976 || ||||||||||||||||| | | || || ||| ||| || || ||||| |||| Sbjct 89316 TTCGAATGGTATTATTCCAATGGTGAGGGTCTTCAACAACACTGCTCGTTATGTTGACCA 89257 Query 111977 AGCTGGGCGTCGCAAGGGATCTATCGCAGT--CTAT---CTT-GAGCCATGGCACGCGGA 112030 || || || ||| | || ||| | || | ||| ||||||||||| || || Sbjct 89256 AGGTG---GTAACAAACGTCCTGGTGCATTTGCTTTGTACTTGGAGCCATGGCATGCCGA 89200 Query 112031 TATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGC-CGCG 112089 ||| | | ||| |||| | ||| ||||| ||| | ||||| | | | || | | Sbjct 89199 CATCTTTGCCTTCATTGATATTCGTAAGAACCATGGTAAAGAGGA-GATCAGAGCTAGAG 89141 Query 112090 ATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCA 112149 | | ||| ||||| | ||||| || ||||| |||||||| ||||| || ||| |||| Sbjct 89140 ACTTATTCCCCGCTTTGTGGATCCCTGATCTGTTCATGAAAAGAGTAGAACAGAATGGCG 89081 Query 112150 ATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGAGGAGT 112209 ||||| | || || | |||| | || || || || |||| | | || || || | Sbjct 89080 ATTGGACCCTGTTCTCTCCAAGTGAAGCTCCTGGCCTTGCCGACGTCTATGGAGATGAAT 89021 Query 112210 TTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGGTGCCAGCTG 112269 |||| | | ||| || ||||| | ||| |||| | | || | ||| Sbjct 89020 TTGAGGAATTGTACGAAAGATACGAAAAGGAAGGTCGTGGAAGACAAACCATCAAAGCCC 88961 Query 112270 CCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTT 112329 | | ||| | || || || || | ||||| || |||||||| |||| ||||| | Sbjct 88960 AAAAGCTTTGGTACGCCATCCTTGAGGCACAAACAGAAACTGGTACTCCATTCATGCTGT 88901 Query 112330 ACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCA 112389 | || || || |||||| |||| | ||| || ||||| |||||||| || || || | Sbjct 88900 ATAAGGATGCTTGTAACAAAAAAACTAACCAGAAGAACTTGGGTGTCATTAAATCCTCTA 88841 Query 112390 ACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCG 112449 |||| || ||||| | |||| | | || ||||| ||||| |||||| | | Sbjct 88840 ACCTTTGCTGTGAAATTGTTGAATACTCTTCCCCGGAAGAGACTGCTGTCTGTAACTTGG 88781 Query 112450 CATCAATCGCTCTCCCCAAGTATGTGGATCCAGA-GACAAAGACATTTG-----ATTATG 112503 | || || ||||| || | ||| || | || || | || || | | || Sbjct 88780 CTTCTATTGCTCTTCCAGCCTTTGTTGAAACCGATGATACTCACTGCTGGTACAACTTTG 88721 Query 112504 AAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAA 112563 |||| || || ||| | || ||| || || ||| | |||||| |||| || |||| Sbjct 88720 AAAAGCTGCATGAAATCACCAAAGTGGTTACTCGTAACTTGAACAGAATTATCGACAGAA 88661 Query 112564 ATTTTTACCCCGTT-GAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTC 112622 |||||||||||||| ||| ||| | | ||| |||||| | | | || || | | | Sbjct 88660 ATTTTTACCCCGTTCCAGA-AGCTAGGAGATCGAATATGCGTAATAGACCTATAGCTGTG 88602 Query 112623 GGTGTCCAAGGTCTCGCGGATG 112644 ||||| |||||| | || |||| Sbjct 88601 GGTGTTCAAGGTTTAGCTGATG 88580 >seq28 Length=541666 Score = 113 bits (124), Expect = 6e-20 Identities = 349/524 (67%), Gaps = 22/524 (4%) Strand=Plus/Plus Query 102099 GCCATCCAAACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT 102158 |||||| | || |||||||||| || | || || || ||||| |||| ||| || | Sbjct 325097 GCCATCGAGACCATTCCATGTATCAAAGAAAAGGCTGACTGGGCCATGAGATGGATTTCT 325156 Query 102159 -ACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTT 102217 | | | || || || ||||| || | | || || || ||||||||||||||| Sbjct 325157 GATGACGATGCATTG-TTCGCTGAACGTTTGGTTGCCTTCGCTGCTGTTGAGGGTATCTT 325215 Query 102218 CTTCTCTGGTTCCTTCTGC-GCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTC 102276 ||| || || | ||| ||| |||| | ||| | |||||| ||||||||||||||||| Sbjct 325216 CTTTTCAGGAT-CTTTTGCTTCTATCTTCTGGTTGAAGAAGAGAGGTCTCATGCCAGGTT 325274 Query 102277 TCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC--GGT 102334 | ||||||||| |||||||| | | ||||||||| | ||| || ||||| | | Sbjct 325275 TGACCTTCTCCAATGAGCTTATTTGCAGAGACGAGGGATTACACACTGACTTTGCTTGCT 325334 Query 102335 GGAACTTTTCAAATTATTGCGTATTAAACCAACGACTGAGACTATTCATTCTATTGTTAA 102394 | ||||| ||| | || | ||| || || | || | ||| | | Sbjct 325335 TGCTATTTTCTCATT-TAAACAATAGAGCCAGTGA-GGAAATCGTTGAAAAGATTATCAC 325392 Query 102395 GGAAGCCGTTGAGATTG--AGAAGGGA-TTCATATTGGATGCCCTTCCATGCGCTCTCAT 102451 || || || ||||| | | |||| | |||| | || || ||||| | | | | Sbjct 325393 AGAGGCTGTCGAGATCGAAAAAAGGTACTTCACA---GACGCTCTTCCTGTCTCCTTACT 325449 Query 102452 CGGTATGAATTCTGAA--AAGATGTCCGAATATATTGAGTATGTATCTGATAGATTGTTG 102509 || ||||| ||| | ||||| | | ||| |||||| || |||| ||| | || Sbjct 325450 GGGGATGAA--CTGCAGCTTGATGTGCCAGTATGTTGAGTTCGTTGCTGACAGACTACTG 325507 Query 102510 AAGCAGATCGGGGTGCCTCCAA--TTTGGAACTCCAAGAATCCATTTGACTTCATGGAGA 102567 | || || ||| | || | | ||| ||| |||||||||||||||||||||| Sbjct 325508 --GTAGCTCTGGGCAACAAAAAGGTGTACAACGTCAACAATCCATTTGACTTCATGGAGA 325565 Query 102568 ACATTAGCCTCGACGGGAAGACAAACTTCTTCGAAAAGAGGGTT 102611 ||||| | | ||| || || ||||||||||||||||| ||| Sbjct 325566 ACATTTCTTTGGCCGGTAAAACCAACTTCTTCGAAAAGAGAGTT 325609 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620741003329600