Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016605.1_202016-02-08] 180 sequences; 9,359,306 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq15 246 4e-60 seq28 96.9 4e-15 >seq15 Length=271170 Score = 246 bits (272), Expect = 4e-60 Identities = 800/1229 (65%), Gaps = 29/1229 (2%) Strand=Plus/Minus Query 75219 ACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTCTTGGAGA 75278 || || | ||||| || || |||||||| || || || ||||||| || | || | Sbjct 89614 ACTTGATTATGCGTGTTGCTATCGGCATTCATGGTGATGACATTGCAAGAGTTATTGAAA 89555 Query 75279 CATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCT 75337 | || || ||| || | |||| |||| ||| || | || || || || || ||| Sbjct 89554 CTTATAACTTTATGAGTCAGAAGTAT-TTCACTCATGCCTCTCCTACTCTGTTTAACGCT 89496 Query 75338 GGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATC 75397 ||||| || || || ||||| || ||| | | |||| ||| |||||||| Sbjct 89495 GGTACCCCTCACCCACAAATGTCATCATGTTTCTTAGTTGCCATGCGGGATGACTCAATT 89436 Query 75398 AACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATT 75457 | || || || | ||| | | ||| ||||| |||||| || ||||| || ||| Sbjct 89435 GAAGGCATTTACGATACTTTGAAGGAATGTGCTTTAATCTCCAAAACTGCTGGTGGAATT 89376 Query 75458 GGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAA 75517 || ||||||| ||| || | | |||| ||| ||| || || || ||| Sbjct 89375 GGTTTGCACATTCATAATATTCGTGCCACAGGATCCTACATTGCTGGTACTAACGGTACT 89316 Query 75518 TCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAA 75577 || ||||||||||||||||| | | || || ||| ||| || || ||||| | ||| Sbjct 89315 TCGAATGGTATTATTCCAATGGTGAGGGTCTTCAACAACACTGCTCGTTATGTTGACCAA 89256 Query 75578 GCGGGGCGTCGCAAGG---GGTCCATC-GCGGTCTACTTGGAACCATGGCATGCCGATAT 75633 | | || | | | ||| ||| || | |||||||| |||||||||||||| || Sbjct 89255 G-GTGGTAACAAACGTCCTGGTGCATTTGCTTTGTACTTGGAGCCATGGCATGCCGACAT 89197 Query 75634 CATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTG-TAGAGATC 75692 | | | ||| |||| | || ||||| ||| | || ||| || | | |||||| Sbjct 89196 CTTTGCCTTCATTGATATTCGTAAGAACCATGGTAAAGAGGAGA-TCAGAGCTAGAGACT 89138 Query 75693 TCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTGGTCAAT 75752 | || | | ||||||| || || || |||||||| | || || || ||| | | Sbjct 89137 TATTCCCCGCTTTGTGGATCCCTGATCTGTTCATGAAAAGAGTAGAACAGAATGGCGATT 89078 Query 75753 GGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGAGGAGTTTG 75812 || | || |||| |||| | || || || || |||||| || || || |||| Sbjct 89077 GGACCCTGTTCTCTCCAAGTGAAGCTCCTGGCCTTGCCGACGTCTATGGAGATGAATTTG 89018 Query 75813 AAGCCCTCTACACAAAGTATGAAGAGGAGGGTAG----AGCCAATGCGACTGTACCAGCC 75868 | | | ||| || || ||| |||| ||| | || ||| || | |||| Sbjct 89017 AGGAATTGTACGAAAGATACGAAAAGGAAGGTCGTGGAAGACAA----ACCATCAAAGCC 88962 Query 75869 GCCGATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTT 75928 | ||||| | || || || | |||| || || ||||| || |||| ||||| Sbjct 88961 CAAAAGCTTTGGTACGCCATCCTTGAGGCACAAACAGAAACTGGTACTCCATTCATGCTG 88902 Query 75929 TACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCA 75988 || ||||||||||||||||| || | |||||| ||||| ||||| || || ||| Sbjct 88901 TATAAGGATGCTTGTAACAAAAAAACTAACCAGAAGAACTTGGGTGTCATTAAATCCTCT 88842 Query 75989 AATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTG 76048 || |||||| |||||| | || ||| | ||| ||||| ||||| || || ||| Sbjct 88841 AACCTTTGCTGTGAAATTGTTGAATACTCTTCCCCGGAAGAGACTGCTGTCTGTAACTTG 88782 Query 76049 GCATCAATCGCCCTTCCAAAGTATGTCAAT---GAAGAGACTCGCACTTTTGAT-----T 76100 || || || || |||||| | ||| | || || |||| ||| || | | Sbjct 88781 GCTTCTATTGCTCTTCCAGCCTTTGTTGAAACCGATGATACTC--ACTGCTGGTACAACT 88724 Query 76101 ATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACA 76160 |||||| || ||||||||||| || | ||||| || | ||| || | || |||| Sbjct 88723 TTGAAAAGCTGCATGAAATCACCAAAGTGGTTACTCGTAACTTGAACAGAATTATCGACA 88664 Query 76161 GAAATTTTTATCCCGTT-GAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGT 76219 |||||||||| |||||| ||| || | | || |||||||| | |||||||| | | Sbjct 88663 GAAATTTTTACCCCGTTCCAGA-AGCTAGGAGATCGAATATGCGTAATAGACCTATAGCT 88605 Query 76220 TTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGATTCAGAT 76279 |||||||||||||| | || |||| ||||| || | | |||||||| Sbjct 88604 GTGGGTGTTCAAGGTTTAGCTGATGCTTTTATGAAGTTGAGAATTCCTTTTGATTCTCCA 88545 Query 76280 GAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCG 76339 |||||||| || | ||| || || |||||||| || || || ||| | |||| || Sbjct 88544 GAAGCCAAACAGCTTAATATTCAGATTTTTGAAACTATCTACCATGCAGCTTTGGAAGCC 88485 Query 76340 AGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCC 76399 ||||| || | | |||| |||| || || || | |||||||| || || Sbjct 88484 TCCAACGAATTAGCCGTCGAAGAAGGAGCCTACGAAACCTTCCAAGGTTCTCCAGCATCT 88425 Query 76400 CAAGGGGTGCTTCAGTTTGATATGTGGGA 76428 || || | | || | ||| ||||||| Sbjct 88424 CAGGGCATTTTGCAATATGACTTGTGGGA 88396 >seq28 Length=541666 Score = 96.9 bits (106), Expect = 4e-15 Identities = 167/238 (70%), Gaps = 10/238 (4%) Strand=Plus/Plus Query 64996 GCCATCCAAACTGTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTT--- 65052 |||||| | || | |||||||| | | ||||| | ||||| |||| |||| || Sbjct 325097 GCCATCGAGACCATTCCATGTATCAAAGAAAAGGCTGACTGGGCCATGAGATGGATTTCT 325156 Query 65053 GAC-ACAAAGTCTCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTAT 65111 || || | | | | ||||| || || | |||| || || ||| |||||||| Sbjct 325157 GATGACGATGCATTG----TTCGCTGAACGTTTGGTTGCCTTCGCTGCTGTTGAGGGTAT 325212 Query 65112 CTTCTTCTCCGGGTCATTCTGC-GCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAG 65170 |||||| || || || || ||| |||| | |||||||||||| | ||||||||||||| Sbjct 325213 CTTCTTTTCAGGATC-TTTTGCTTCTATCTTCTGGTTGAAGAAGAGAGGTCTCATGCCAG 325271 Query 65171 GCCTATGCTTCTCAAATGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGC 65228 | | |||||| ||||| ||||||| | |||| ||||| | ||| || ||||| Sbjct 325272 GTTTGACCTTCTCCAATGAGCTTATTTGCAGAGACGAGGGATTACACACTGACTTTGC 325329 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596568257718400