Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016605.1_202016-02-08]
180 sequences; 9,359,306 total letters
Query= NC_021249.1
Length=282895
Score E
Sequences producing significant alignments: (Bits) Value
seq24 154 3e-32
seq23 140 6e-28
seq21 129 1e-24
seq5 98.7 2e-15
>seq24
Length=213747
Score = 154 bits (170), Expect = 3e-32
Identities = 171/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 171842 ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGA 171901
|||||||||||||| |||||| || || | ||| | || || |||||| ||||| ||
Sbjct 340 ACCACCTCTAAGTCTTAATACCAAGTGAAGAGTGGATTCCTTTTGAATATTGTAATCAGA 281
Query 171902 TAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGG 171961
| || || |||| |||| ||| |||||||| || || || | || |||||||| ||
Sbjct 280 AAGAGTTCTACCGTCTTCCAGTTGCTTACCAGCGAAGATCAAACGTTGCTGGTCAGGAGG 221
Query 171962 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTAC 172021
|| ||||| || ||||| || ||| ||| || ||| ||||||||||| || |||||
Sbjct 220 AATACCTTCCTTGTCTTGAATCTTAGATTTGACGTTATCAATAGTATCTGATGACTCTAC 161
Query 172022 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| ||||| || || |||||||||| || || | ||| ||||||||
Sbjct 160 CTCAAGAGTGATAGTCTTACCAGTTAGAGTCTTGACGAAAATCTGCAT 113
>seq23
Length=97367
Score = 140 bits (154), Expect = 6e-28
Identities = 173/237 (73%), Gaps = 0/237 (0%)
Strand=Plus/Minus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|||||||| || | || || || || || | || | || || || || |||||
Sbjct 97303 ATACCACCCCTTAATCTTAGAACCAAGTGGAGGGTGGATTCCTTTTGGATGTTGTAATCA 97244
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|| | || || |||| |||| ||| ||||||||||||||||| | || ||||||||
Sbjct 97243 GAAAGAGTTCTACCGTCTTCCAGTTGCTTACCAGCAAAAATTAAACGTTGCTGGTCAGGA 97184
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || ||||| |||||||| || || ||| |||||| ||||| ||||| || ||
Sbjct 97183 GGAATACCTTCCTTATCTTGAATCTTGGATTTGACATTATCAATAGTGTCTGATGACTCC 97124
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTTATTA 172076
|| || ||||| || || ||||| |||| ||||||| || ||||||||||| |||
Sbjct 97123 ACCTCAAGAGTGATAGTCTTACCTGTTAGGGTTTTAACAAAAATCTGCATTTTTTTA 97067
>seq21
Length=1112242
Score = 129 bits (142), Expect = 1e-24
Identities = 170/236 (72%), Gaps = 0/236 (0%)
Strand=Plus/Minus
Query 171837 ATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAA 171896
|| ||||||||||| | || | || | || ||||||| ||| || || || ||
Sbjct 540082 ATGATACCACCTCTCAATCTCAGAACCAGGTGCAAAGTAGACTCCTTCTGGATGTTGTAG 540023
Query 171897 TCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCA 171956
|| || | || || |||| |||| ||| |||||||||||||| || | |||||||||
Sbjct 540022 TCAGACAGAGTTCTACCGTCTTCCAGTTGCTTACCAGCAAAAATCAAACGTTGTTGGTCA 539963
Query 171957 GGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGAT 172016
|| || |||||||| || ||||| || || || ||||| || || || || ||
Sbjct 539962 GGAGGAATTCCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCGATGGTGTCGGAGGAC 539903
Query 172017 TCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072
|| ||||| | ||||| || ||||| ||||| || || | ||| |||||||||||
Sbjct 539902 TCGACTTCCAAGGTAATAGTCTTACCGGTTAAGGTCTTGACGAAAATCTGCATTTT 539847
>seq5
Length=641797
Score = 98.7 bits (108), Expect = 2e-15
Identities = 165/239 (69%), Gaps = 0/239 (0%)
Strand=Plus/Minus
Query 171834 TTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTA 171893
||| || ||||||||| | || | || || || ||||||| ||| || || ||
Sbjct 231944 TTCTTACCACCACCTCTCAATCTAAGGACCAAGTGCAAAGTAGACTCCTTTTGGATGTTG 231885
Query 171894 TAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGG 171953
|| || || |||| || | || |||||||| ||||||||||| || | | |||||||
Sbjct 231884 TAGTCAGACAAAGTTCTACCATCCTCCAATTGCTTACCAGCAAAGATCAGACGCTGTTGG 231825
Query 171954 TCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGAC 172013
||||| || ||||| || || || || || || || || || ||||| || ||
Sbjct 231824 TCAGGAGGAATTCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCAATAGTGTCGGAA 231765
Query 172014 GATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072
|| || || || | || || || ||||| || | || || | ||| || ||||||||
Sbjct 231764 GACTCCACCTCCAAGGTGATAGTCTTACCGGTAAGGGTCTTTACGAAAATTTGCATTTT 231706
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 905133963444000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |